Conservation of cofitness between GFF1466 and GFF2934 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF1466 Alkylphosphonate utilization operon protein PhnA 1.0 GFF2934 YrbA protein 0.68 9
Escherichia coli BW25113 0.98 b4108 phnA hypothetical protein (NCBI) 0.98 b3190 yrbA orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECRC99 0.98 KEDOAH_15560 yjdM Protein YjdM 0.98 KEDOAH_10150 ibaG BolA family iron metabolism protein IbaG — —
Escherichia coli Nissle 1917 0.98 ECOLIN_RS23775 zinc ribbon domain-containing protein YjdM 0.98 ECOLIN_RS18365 BolA family iron metabolism protein IbaG low > 52
Escherichia fergusonii Becca 0.98 EFB2_04475 hypothetical protein 0.98 EFB2_00633 Acid stress protein IbaG low > 86
Escherichia coli ECRC102 0.98 NIAGMN_10450 yjdM Protein YjdM 0.98 NIAGMN_15760 ibaG BolA family iron metabolism protein IbaG — —
Escherichia coli ECOR27 0.98 NOLOHH_04870 yjdM Protein YjdM 0.98 NOLOHH_09800 ibaG BolA family iron metabolism protein IbaG low > 57
Escherichia coli BL21 0.98 ECD_03979 zinc-ribbon family protein 0.98 ECD_03055 acid stress protein; putative BolA family transcriptional regulator low > 60
Escherichia coli ECRC101 0.98 MCAODC_03115 yjdM Protein YjdM 0.98 MCAODC_08520 ibaG BolA family iron metabolism protein IbaG — —
Escherichia coli ECOR38 0.98 HEPCGN_11240 yjdM Protein YjdM 0.98 HEPCGN_16875 ibaG BolA family iron metabolism protein IbaG 0.54 79
Escherichia coli ECRC101 0.98 OKFHMN_12605 yjdM Protein YjdM 0.98 OKFHMN_18000 ibaG BolA family iron metabolism protein IbaG — —
Escherichia coli ECRC62 0.98 BNILDI_06620 yjdM Protein YjdM 0.98 BNILDI_01735 ibaG BolA family iron metabolism protein IbaG — —
Escherichia coli ECRC98 0.98 JDDGAC_16240 yjdM Protein YjdM 0.98 JDDGAC_21625 ibaG BolA family iron metabolism protein IbaG — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.98 OHPLBJKB_03937 hypothetical protein 0.98 OHPLBJKB_00510 Acid stress protein IbaG 0.53 24
Enterobacter asburiae PDN3 0.95 EX28DRAFT_4198 alkylphosphonate utilization operon protein PhnA 0.94 EX28DRAFT_3244 Predicted transcriptional regulator, BolA superfamily low > 76
Enterobacter sp. TBS_079 0.95 MPMX20_00327 hypothetical protein 0.94 MPMX20_04096 Acid stress protein IbaG low > 85
Klebsiella michiganensis M5al 0.93 BWI76_RS02240 alkylphosphonate utilization operon protein PhnA 0.94 BWI76_RS25205 hypothetical protein low > 92
Serratia liquefaciens MT49 0.91 IAI46_06020 phnA family protein 0.83 IAI46_22405 BolA family iron metabolism protein IbaG low > 86
Pectobacterium carotovorum WPP14 0.75 HER17_RS16190 alkylphosphonate utilization protein 0.84 HER17_RS20000 BolA family iron metabolism protein IbaG low > 75
Dickeya dianthicola ME23 0.74 DZA65_RS05690 alkylphosphonate utilization protein 0.85 DZA65_RS01570 BolA family iron metabolism protein IbaG — —
Dickeya dianthicola 67-19 0.74 HGI48_RS05390 alkylphosphonate utilization protein 0.85 HGI48_RS01505 BolA family iron metabolism protein IbaG low > 71
Dickeya dadantii 3937 0.73 DDA3937_RS05305 alkylphosphonate utilization protein 0.85 DDA3937_RS01590 BolA family iron metabolism protein IbaG low > 74
Rahnella sp. WP5 0.73 EX31_RS19010 alkylphosphonate utilization protein 0.84 EX31_RS12460 BolA family transcriptional regulator low > 89
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_0863 PhnA protein 0.34 Psyr_4136 BolA-like protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_0863 PhnA protein 0.34 Psyr_4136 BolA-like protein — —
Pantoea sp. MT58 0.72 IAI47_04280 alkylphosphonate utilization protein 0.81 IAI47_17120 BolA family iron metabolism protein IbaG low > 76
Pseudomonas simiae WCS417 0.71 PS417_23570 hypothetical protein 0.33 PS417_04400 BolA family transcriptional regulator — —
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_14090 alkylphosphonate utilization protein 0.32 AO353_05125 BolA family transcriptional regulator low > 101
Pseudomonas sp. S08-1 0.70 OH686_07235 Protein PhnA 0.33 OH686_08485 YrbA protein low > 80
Pseudomonas fluorescens SBW25 0.70 PFLU_RS25385 alkylphosphonate utilization protein 0.33 PFLU_RS04455 BolA family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.70 PFLU_RS25385 alkylphosphonate utilization protein 0.33 PFLU_RS04455 BolA family transcriptional regulator low > 109
Pseudomonas fluorescens FW300-N2E2 0.70 Pf6N2E2_5098 Alkylphosphonate utilization operon protein PhnA 0.35 Pf6N2E2_3255 YrbA protein low > 103
Erwinia tracheiphila SCR3 0.70 LU632_RS22225 alkylphosphonate utilization protein 0.84 LU632_RS21220 ibaG BolA family iron metabolism protein IbaG — —
Pseudomonas fluorescens GW456-L13 0.70 PfGW456L13_1467 Alkylphosphonate utilization operon protein PhnA 0.34 PfGW456L13_5003 YrbA protein low > 87
Pseudomonas fluorescens FW300-N1B4 0.70 Pf1N1B4_2795 Alkylphosphonate utilization operon protein PhnA 0.34 Pf1N1B4_1069 YrbA protein low > 87
Pseudomonas putida KT2440 0.70 PP_0686 conserved protein of unknown function 0.34 PP_0963 putative BolA family protein low > 96
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_15790 alkylphosphonate utilization protein 0.35 AO356_06980 BolA family transcriptional regulator low > 104
Marinobacter adhaerens HP15 0.69 HP15_843 PhnA protein 0.39 HP15_2431 transcriptional regulator, BolA superfamily protein — —
Ralstonia solanacearum GMI1000 0.68 RS_RS23785 hypothetical protein 0.28 RS_RS14805 BolA family transcriptional regulator low > 80
Acinetobacter radioresistens SK82 0.68 MPMX26_00660 hypothetical protein 0.35 MPMX26_02590 Acid stress protein IbaG — —
Pseudomonas sp. RS175 0.67 PFR28_03774 hypothetical protein 0.34 PFR28_00184 hypothetical protein low > 88
Pseudomonas stutzeri RCH2 0.67 Psest_0770 alkylphosphonate utilization operon protein PhnA 0.36 Psest_3301 Predicted transcriptional regulator, BolA superfamily low > 67
Ralstonia solanacearum UW163 0.66 UW163_RS21605 alkylphosphonate utilization protein 0.27 UW163_RS06755 BolA family transcriptional regulator — —
Ralstonia solanacearum IBSBF1503 0.66 RALBFv3_RS17545 alkylphosphonate utilization protein 0.27 RALBFv3_RS06860 BolA family transcriptional regulator — —
Herbaspirillum seropedicae SmR1 0.63 HSERO_RS13640 hypothetical protein 0.29 HSERO_RS20360 cell division protein BolA — —
Shewanella loihica PV-4 0.62 Shew_1931 alkylphosphonate utilization operon protein PhnA (RefSeq) 0.61 Shew_3299 BolA family protein (RefSeq) — —
Ralstonia sp. UNC404CL21Col 0.58 ABZR87_RS12375 zinc ribbon domain-containing protein YjdM 0.29 ABZR87_RS02515 BolA family protein low > 80
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS24510 alkylphosphonate utilization protein 0.30 BPHYT_RS17725 BolA family transcriptional regulator low > 109
Alteromonas macleodii MIT1002 0.54 MIT1002_00555 putative alkylphosphonate utilization operon protein PhnA 0.56 MIT1002_00839 transcriptional regulator BolA — —
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS12350 alkylphosphonate utilization protein 0.30 RR42_RS18930 BolA family transcriptional regulator low > 128
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_05381 phosphonoacetate hydrolase 0.30 H281DRAFT_05649 transcriptional regulator, BolA protein family low > 103
Acidovorax sp. GW101-3H11 0.50 Ac3H11_4421 Alkylphosphonate utilization operon protein PhnA 0.32 Ac3H11_4720 YrbA protein — —
Dechlorosoma suillum PS 0.46 Dsui_0559 alkylphosphonate utilization operon protein PhnA 0.37 Dsui_1406 putative transcriptional regulator, BolA superfamily — —

Not shown: 18 genomes with orthologs for GFF1466 only; 11 genomes with orthologs for GFF2934 only