Conservation of cofitness between GFF7380 and GFF269 in Variovorax sp. SCN45

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Variovorax sp. SCN45 1.0 GFF7380 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) 1.0 GFF269 2-methylaconitate isomerase 0.94 15
Variovorax sp. OAS795 0.87 ABID97_RS19410 enoyl-CoA hydratase/isomerase family protein 0.61 ABID97_RS19020 2-methylaconitate cis-trans isomerase PrpF low > 91
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS01610 enoyl-CoA hydratase 0.79 HSERO_RS11420 3-methylitaconate isomerase — —
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.3686.1 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) 0.80 Xcc-8004.3976.1 2-methylaconitate cis-trans isomerase 0.46 27
Marinobacter adhaerens HP15 0.40 HP15_909 enoyl-CoA hydratase/isomerase family protein 0.75 HP15_1929 AcnD-accessory protein PrpF — —
Shewanella oneidensis MR-1 0.38 SO1681 enoyl-CoA hydratase/isomerase family protein (NCBI ptt file) 0.81 SO0342 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.38 Shewana3_2767 enoyl-CoA hydratase/isomerase (RefSeq) 0.81 Shewana3_3828 methylitaconate delta2-delta3-isomerase (RefSeq) 0.71 9
Shewanella loihica PV-4 0.36 Shew_1671 enoyl-CoA hydratase/isomerase (RefSeq) 0.74 Shew_1823 putative AcnD-accessory protein PrpF (RefSeq) low > 60
Pseudomonas simiae WCS417 0.36 PS417_07030 enoyl-CoA hydratase 0.82 PS417_21065 3-methylitaconate isomerase low > 88
Shewanella amazonensis SB2B 0.36 Sama_1379 enoyl-CoA hydratase/isomerase family protein (RefSeq) 0.75 Sama_3297 hypothetical protein (RefSeq) low > 62
Pseudomonas sp. S08-1 0.36 OH686_05880 3-hydroxyisobutyryl-CoA hydrolase 0.79 OH686_01675 probable AcnD-accessory protein PrpF — —
Pseudomonas fluorescens SBW25 0.36 PFLU_RS07105 enoyl-CoA hydratase/isomerase family protein 0.81 PFLU_RS22675 2-methylaconitate cis-trans isomerase PrpF low > 109
Pseudomonas fluorescens SBW25-INTG 0.36 PFLU_RS07105 enoyl-CoA hydratase/isomerase family protein 0.81 PFLU_RS22675 2-methylaconitate cis-trans isomerase PrpF low > 109
Alteromonas macleodii MIT1002 0.35 MIT1002_01979 Carnitinyl-CoA dehydratase 0.75 MIT1002_03132 3-methylitaconate isomerase — —
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_2773 Enoyl-CoA hydratase (EC 4.2.1.17) 0.83 Pf6N2E2_6064 2-methylaconitate isomerase low > 103
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_04640 enoyl-CoA hydratase 0.82 AO356_20880 3-methylitaconate isomerase low > 104
Pseudomonas sp. RS175 0.34 PFR28_00676 Fatty acid oxidation complex subunit alpha 0.83 PFR28_02924 2-methyl-aconitate isomerase low > 88
Pseudomonas fluorescens FW300-N1B4 0.33 Pf1N1B4_3308 Enoyl-CoA hydratase (EC 4.2.1.17) 0.82 Pf1N1B4_3822 2-methylaconitate cis-trans isomerase — —
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_4531 Enoyl-CoA hydratase (EC 4.2.1.17) 0.82 PfGW456L13_4115 2-methylaconitate cis-trans isomerase low > 87
Pseudomonas putida KT2440 0.33 PP_1412 3-hydroxyisobutyryl-CoA hydrolase 0.83 PP_2337 aconitate isomerase low > 96
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_17555 enoyl-CoA hydratase 0.83 AO353_00885 3-methylitaconate isomerase low > 101
Pseudomonas stutzeri RCH2 0.31 Psest_3110 Enoyl-CoA hydratase/carnithine racemase 0.79 Psest_2318 probable AcnD-accessory protein PrpF — —
Azospirillum brasilense Sp245 0.30 AZOBR_RS08460 enoyl-CoA hydratase 0.73 AZOBR_RS24310 3-methylitaconate isomerase low > 97
Cupriavidus basilensis FW507-4G11 0.27 RR42_RS28545 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) (from data) 0.87 RR42_RS11275 3-methylitaconate isomerase low > 128
Paraburkholderia bryophila 376MFSha3.1 0.26 H281DRAFT_01199 Enoyl-CoA hydratase/carnithine racemase 0.83 H281DRAFT_02982 2-methylaconitate cis-trans isomerase low > 103
Acidovorax sp. GW101-3H11 0.25 Ac3H11_2862 Enoyl-CoA hydratase (EC 4.2.1.17) 0.77 Ac3H11_2325 2-methylaconitate cis-trans isomerase — —
Ralstonia sp. UNC404CL21Col 0.25 ABZR87_RS17485 enoyl-CoA hydratase/isomerase family protein 0.84 ABZR87_RS16730 2-methylaconitate cis-trans isomerase PrpF low > 80
Paraburkholderia sabiae LMG 24235 0.25 QEN71_RS12380 enoyl-CoA hydratase/isomerase family protein 0.86 QEN71_RS31055 2-methylaconitate cis-trans isomerase PrpF 0.46 29
Paraburkholderia graminis OAS925 0.25 ABIE53_005737 enoyl-CoA hydratase/carnithine racemase 0.84 ABIE53_005044 putative AcnD-accessory protein PrpF low > 113
Ralstonia solanacearum IBSBF1503 0.25 RALBFv3_RS20425 enoyl-CoA hydratase/isomerase family protein 0.82 RALBFv3_RS22835 2-methylaconitate cis-trans isomerase PrpF low > 76
Pseudomonas syringae pv. syringae B728a ΔmexB 0.25 Psyr_1770 Enoyl-CoA hydratase/isomerase 0.80 Psyr_2088 2-methylaconitate cis-trans isomerase low > 86
Pseudomonas syringae pv. syringae B728a 0.25 Psyr_1770 Enoyl-CoA hydratase/isomerase 0.80 Psyr_2088 2-methylaconitate cis-trans isomerase low > 86
Acinetobacter radioresistens SK82 0.25 MPMX26_01232 1,4-dihydroxy-2-naphthoyl-CoA synthase 0.76 MPMX26_00659 2-methyl-aconitate isomerase low > 36
Ralstonia solanacearum UW163 0.25 UW163_RS18750 enoyl-CoA hydratase/isomerase family protein 0.82 UW163_RS23455 2-methylaconitate cis-trans isomerase PrpF — —
Ralstonia solanacearum PSI07 0.25 RPSI07_RS02315 enoyl-CoA hydratase/isomerase family protein 0.84 RPSI07_RS00385 2-methylaconitate cis-trans isomerase PrpF low > 81
Ralstonia solanacearum GMI1000 0.24 RS_RS20215 enoyl-CoA hydratase/isomerase family protein 0.83 RS_RS17725 2-methylaconitate cis-trans isomerase PrpF low > 80
Burkholderia phytofirmans PsJN 0.24 BPHYT_RS08630 3-hydroxyisobutyryl-CoA hydrolase 0.83 BPHYT_RS30140 3-methylitaconate isomerase low > 109

Not shown: 17 genomes with orthologs for GFF7380 only; 4 genomes with orthologs for GFF269 only