Conservation of cofitness between Psest_0181 and Psest_2138 in Pseudomonas stutzeri RCH2

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0181 glycine cleavage system T protein 1.0 Psest_2138 RND family efflux transporter, MFP subunit 0.34 16
Pseudomonas sp. S08-1 0.84 OH686_11175 glycine cleavage system T protein 0.56 OH686_00920 Multidrug efflux system MdtABC-TolC, membrane fusion component MdtA low > 80
Pseudomonas simiae WCS417 0.81 PS417_27255 glycine cleavage system protein T 0.58 PS417_12740 secretion protein HlyD low > 88
Pseudomonas fluorescens SBW25-INTG 0.80 PFLU_RS28915 glycine cleavage system aminomethyltransferase GcvT 0.58 PFLU_RS13425 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit low > 109
Pseudomonas fluorescens SBW25 0.80 PFLU_RS28915 glycine cleavage system aminomethyltransferase GcvT 0.58 PFLU_RS13425 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit low > 109
Pseudomonas fluorescens GW456-L13 0.80 PfGW456L13_902 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.59 PfGW456L13_3267 RND transporter, membrane fusion protein low > 87
Pseudomonas fluorescens FW300-N2C3 0.80 AO356_13035 glycine cleavage system protein T 0.58 AO356_25870 secretion protein HlyD low > 104
Pseudomonas fluorescens FW300-N2E2 0.79 Pf6N2E2_4485 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.59 Pf6N2E2_1273 Probable RND efflux membrane fusion protein low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.78 Psyr_0246 aminomethyltransferase 0.58 Psyr_2482 Secretion protein HlyD low > 86
Pseudomonas syringae pv. syringae B728a 0.78 Psyr_0246 aminomethyltransferase 0.58 Psyr_2482 Secretion protein HlyD low > 86
Pseudomonas sp. RS175 0.78 PFR28_04316 Aminomethyltransferase 0.59 PFR28_02195 Multidrug resistance protein MdtA 0.32 86
Pseudomonas fluorescens FW300-N2E3 0.78 AO353_08735 glycine cleavage system protein T 0.57 AO353_22890 secretion protein HlyD low > 101
Pseudomonas putida KT2440 0.75 PP_5194 aminomethyltransferase 0.54 PP_3585 multidrug efflux transport system - putative membrane fusion protein low > 96
Serratia liquefaciens MT49 0.60 IAI46_20860 glycine cleavage system aminomethyltransferase GcvT 0.37 IAI46_18970 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit low > 86
Escherichia fergusonii Becca 0.60 EFB2_00997 Aminomethyltransferase 0.40 EFB2_01781 Multidrug resistance protein MdtA low > 86
Escherichia coli ECOR27 0.60 NOLOHH_11435 gcvT glycine cleavage system aminomethyltransferase GcvT 0.40 NOLOHH_15545 mdtA multidrug efflux RND transporter subunit MdtA
Escherichia coli BL21 0.60 ECD_02737 aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex 0.40 ECD_01979 multidrug efflux system, subunit A low > 60
Escherichia coli ECRC62 0.60 BNILDI_09970 gcvT glycine cleavage system aminomethyltransferase GcvT 0.40 BNILDI_14460 mdtA multidrug efflux RND transporter subunit MdtA
Escherichia coli BW25113 0.60 b2905 gcvT glycine cleavage system aminomethyltransferase T (NCBI) 0.40 b2074 b2074 putative membrane protein (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_00810 Aminomethyltransferase 0.40 OHPLBJKB_01630 Multidrug resistance protein MdtA low > 73
Escherichia coli ECRC101 0.60 MCAODC_10040 gcvT glycine cleavage system aminomethyltransferase GcvT 0.40 MCAODC_20740 mdtA multidrug efflux RND transporter subunit MdtA
Escherichia coli ECRC102 0.60 NIAGMN_17285 gcvT glycine cleavage system aminomethyltransferase GcvT 0.40 NIAGMN_22145 mdtA multidrug efflux RND transporter subunit MdtA
Escherichia coli ECRC101 0.60 OKFHMN_19520 gcvT glycine cleavage system aminomethyltransferase GcvT 0.40 OKFHMN_24200 mdtA multidrug efflux RND transporter subunit MdtA
Escherichia coli ECRC99 0.60 KEDOAH_08620 gcvT glycine cleavage system aminomethyltransferase GcvT 0.40 KEDOAH_03950 mdtA multidrug efflux RND transporter subunit MdtA
Escherichia coli Nissle 1917 0.60 ECOLIN_RS16175 glycine cleavage system aminomethyltransferase GcvT 0.40 ECOLIN_RS12195 multidrug efflux RND transporter subunit MdtA
Escherichia coli ECOR38 0.60 HEPCGN_18810 gcvT glycine cleavage system aminomethyltransferase GcvT 0.41 HEPCGN_02890 mdtA multidrug efflux RND transporter subunit MdtA low > 85
Escherichia coli ECRC98 0.60 JDDGAC_23160 gcvT glycine cleavage system aminomethyltransferase GcvT 0.40 JDDGAC_28310 mdtA multidrug efflux RND transporter subunit MdtA
Enterobacter asburiae PDN3 0.59 EX28DRAFT_2957 glycine cleavage system T protein 0.42 EX28DRAFT_0484 RND family efflux transporter, MFP subunit low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF3005 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.37 GFF3855 Multidrug transporter MdtA low > 78
Pectobacterium carotovorum WPP14 0.59 HER17_RS18005 glycine cleavage system aminomethyltransferase GcvT 0.39 HER17_RS06325 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit low > 75
Enterobacter sp. TBS_079 0.59 MPMX20_03764 Aminomethyltransferase 0.41 MPMX20_03060 Multidrug resistance protein MdtA low > 85
Klebsiella michiganensis M5al 0.59 BWI76_RS23880 Aminomethyltransferase (EC 2.1.2.10) (from data) 0.39 BWI76_RS19250 multidrug transporter subunit MdtA low > 92
Dickeya dianthicola 67-19 0.59 HGI48_RS03390 glycine cleavage system aminomethyltransferase GcvT 0.38 HGI48_RS15340 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit low > 71
Dickeya dadantii 3937 0.59 DDA3937_RS03245 glycine cleavage system aminomethyltransferase GcvT 0.39 DDA3937_RS15260 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit low > 74
Rahnella sp. WP5 0.59 EX31_RS21510 glycine cleavage system aminomethyltransferase GcvT 0.38 EX31_RS13385 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit low > 89
Pantoea sp. MT58 0.59 IAI47_03765 glycine cleavage system aminomethyltransferase GcvT 0.41 IAI47_06875 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit low > 76
Erwinia tracheiphila SCR3 0.58 LU632_RS05905 gcvT glycine cleavage system aminomethyltransferase GcvT 0.38 LU632_RS08695 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit low > 74
Dickeya dianthicola ME23 0.58 DZA65_RS03435 glycine cleavage system aminomethyltransferase GcvT 0.37 DZA65_RS16160 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit low > 75
Rhodanobacter denitrificans MT42 0.55 LRK55_RS05280 glycine cleavage system aminomethyltransferase GcvT 0.25 LRK55_RS11625 efflux RND transporter periplasmic adaptor subunit low > 63
Xanthomonas campestris pv. campestris strain 8004 0.55 Xcc-8004.1567.1 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.30 Xcc-8004.4791.1 Probable Co/Zn/Cd efflux system membrane fusion protein low > 74
Rhodanobacter denitrificans FW104-10B01 0.55 LRK54_RS05510 glycine cleavage system aminomethyltransferase GcvT 0.26 LRK54_RS11900 efflux RND transporter periplasmic adaptor subunit low > 59
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS18875 glycine cleavage system aminomethyltransferase GcvT 0.27 ABZR86_RS16315 efflux RND transporter periplasmic adaptor subunit low > 74
Rhodanobacter sp. FW510-T8 0.55 OKGIIK_01305 gcvT glycine cleavage system aminomethyltransferase GcvT 0.26 OKGIIK_11995 efflux RND transporter periplasmic adaptor subunit low > 52
Castellaniella sp019104865 MT123 0.53 ABCV34_RS08845 glycine cleavage system aminomethyltransferase GcvT 0.35 ABCV34_RS14615 efflux RND transporter periplasmic adaptor subunit low > 48
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS29205 glycine cleavage system aminomethyltransferase GcvT 0.42 QEN71_RS23300 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit low > 153
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS08650 glycine cleavage system protein T 0.44 RALBFv3_RS18125 multidrug transporter subunit MdtA low > 76
Paraburkholderia bryophila 376MFSha3.1 0.48 H281DRAFT_02411 aminomethyltransferase 0.41 H281DRAFT_06493 membrane fusion protein, multidrug efflux system low > 103
Ralstonia solanacearum UW163 0.48 UW163_RS04960 glycine cleavage system protein T 0.44 UW163_RS21005 multidrug transporter subunit MdtA
Ralstonia solanacearum GMI1000 0.48 RS_RS16500 aminomethyltransferase 0.43 RS_RS22910 multidrug transporter subunit MdtA low > 80
Ralstonia solanacearum PSI07 0.48 RPSI07_RS08585 glycine cleavage system protein T 0.45 RPSI07_RS05510 multidrug transporter subunit MdtA low > 81
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS19320 glycine cleavage system protein T 0.40 BPHYT_RS07790 RND transporter MFP subunit low > 109
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS03925 glycine cleavage system aminomethyltransferase GcvT 0.44 ABZR87_RS19030 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit low > 80
Bacteroides ovatus ATCC 8483 0.31 BACOVA_05378 aminomethyltransferase 0.19 BACOVA_00421 ATP synthase, Delta/Epsilon chain, long alpha-helix domain protein low > 94
Mucilaginibacter yixingensis YX-36 DSM 26809 0.29 ABZR88_RS21210 glycine cleavage system aminomethyltransferase GcvT 0.20 ABZR88_RS03045 efflux RND transporter periplasmic adaptor subunit
Parabacteroides merdae CL09T00C40 0.28 HMPREF1078_RS10420 glycine cleavage system aminomethyltransferase GcvT 0.18 HMPREF1078_RS01365 efflux RND transporter periplasmic adaptor subunit low > 61
Azospirillum sp. SherDot2 0.27 MPMX19_01029 Aminomethyltransferase 0.28 MPMX19_05478 Multidrug resistance protein MdtA low > 112
Hydrogenophaga sp. GW460-11-11-14-LB1 0.27 GFF5213 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.36 GFF486 Probable Co/Zn/Cd efflux system membrane fusion protein low > 90
Rhodopseudomonas palustris CGA009 0.26 TX73_019925 glycine cleavage system aminomethyltransferase GcvT 0.33 TX73_013305 efflux RND transporter periplasmic adaptor subunit low > 86
Magnetospirillum magneticum AMB-1 0.26 AMB_RS03925 glycine cleavage system protein T 0.31 AMB_RS17375 efflux RND transporter periplasmic adaptor subunit low > 64
Bosea sp. OAE506 0.24 ABIE41_RS22930 glycine cleavage system aminomethyltransferase GcvT 0.22 ABIE41_RS20145 efflux RND transporter periplasmic adaptor subunit low > 77
Variovorax sp. SCN45 0.23 GFF6476 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.33 GFF6660 Multidrug efflux system MdtABC-TolC, membrane fusion component MdtA low > 127

Not shown: 34 genomes with orthologs for Psest_0181 only; 2 genomes with orthologs for Psest_2138 only