Conservation of cofitness between GFF362 and GFF2039 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF362 Putative inner membrane protein 1.0 GFF2039 Putative cytochrome oxidase 0.62 9
Enterobacter asburiae PDN3 0.94 EX28DRAFT_3895 Predicted membrane protein 0.84 EX28DRAFT_0219 Predicted Na+-dependent transporter low > 76
Klebsiella michiganensis M5al 0.91 BWI76_RS27405 membrane protein 0.85 BWI76_RS20615 sodium symporter low > 92
Escherichia coli ECRC101 0.89 OKFHMN_15575 yicG UPF0126 inner membrane protein YicG 0.89 OKFHMN_22225 yfeH Putative symporter YfeH
Escherichia coli HS(pFamp)R (ATCC 700891) 0.89 OHPLBJKB_00055 hypothetical protein 0.89 OHPLBJKB_01314 hypothetical protein low > 73
Escherichia fergusonii Becca 0.89 EFB2_00142 hypothetical protein 0.89 EFB2_01467 hypothetical protein low > 86
Escherichia coli BL21 0.89 ECD_03503 UPF0126 family inner membrane protein 0.89 ECD_02309 putative inorganic ion transporter low > 60
Escherichia coli ECRC99 0.89 KEDOAH_12570 yicG UPF0126 inner membrane protein YicG 0.89 KEDOAH_05995 yfeH Putative symporter YfeH
Escherichia coli Nissle 1917 0.89 ECOLIN_RS20770 trimeric intracellular cation channel family protein 0.89 ECOLIN_RS13845 bile acid:sodium symporter family protein
Escherichia coli ECRC101 0.89 MCAODC_06085 yicG UPF0126 inner membrane protein YicG 0.89 MCAODC_12755 yfeH Putative symporter YfeH
Escherichia coli ECRC62 0.89 BNILDI_04060 yicG UPF0126 inner membrane protein YicG 0.89 BNILDI_12770 yfeH Putative symporter YfeH
Escherichia coli ECRC98 0.89 JDDGAC_19200 yicG UPF0126 inner membrane protein YicG 0.89 JDDGAC_26175 yfeH Putative symporter YfeH
Escherichia coli ECOR38 0.89 HEPCGN_14395 yicG UPF0126 inner membrane protein YicG 0.89 HEPCGN_21405 yfeH Putative symporter YfeH low > 85
Escherichia coli ECRC102 0.89 NIAGMN_13335 yicG UPF0126 inner membrane protein YicG 0.89 NIAGMN_19995 yfeH Putative symporter YfeH
Escherichia coli ECOR27 0.89 NOLOHH_07455 yicG UPF0126 inner membrane protein YicG 0.89 NOLOHH_13905 yfeH Putative symporter YfeH low > 57
Escherichia coli BW25113 0.89 b3646 yicG orf, hypothetical protein (VIMSS) 0.89 b2410 yfeH predicted inner membrane protein (NCBI) low > 76
Enterobacter sp. TBS_079 0.85 MPMX20_00090 hypothetical protein 0.85 MPMX20_03303 hypothetical protein 0.14 70
Pantoea sp. MT58 0.75 IAI47_00530 trimeric intracellular cation channel family protein 0.65 IAI47_05465 bile acid:sodium symporter low > 76
Serratia liquefaciens MT49 0.71 IAI46_24875 trimeric intracellular cation channel family protein 0.70 IAI46_18420 bile acid:sodium symporter low > 86
Rahnella sp. WP5 0.71 EX31_RS15790 trimeric intracellular cation channel family protein 0.65 EX31_RS20150 bile acid:sodium symporter low > 89
Pseudomonas putida KT2440 0.60 PP_4901 conserved inner membrane protein 0.46 PP_2877 putative osmotic pressure-regulated transporter low > 96
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS02535 trimeric intracellular cation channel family protein 0.48 PFLU_RS18220 bile acid:sodium symporter low > 109
Pseudomonas fluorescens SBW25 0.58 PFLU_RS02535 trimeric intracellular cation channel family protein 0.48 PFLU_RS18220 bile acid:sodium symporter low > 109
Pseudomonas simiae WCS417 0.58 PS417_02455 putative transporter, required for glycine utilization (from data) 0.47 PS417_16190 bile acid:sodium symporter low > 88
Acinetobacter radioresistens SK82 0.57 MPMX26_00138 hypothetical protein 0.42 MPMX26_01062 hypothetical protein low > 36
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_0565 Protein of unknown function UPF0126 0.29 Psyr_0648 transporter, putative low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_0565 Protein of unknown function UPF0126 0.29 Psyr_0648 transporter, putative 0.61 9
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_1419 putative membrane protein 0.32 Pf1N1B4_1269 Sodium/bile acid symporter family low > 87
Pseudomonas sp. RS175 0.55 PFR28_05114 hypothetical protein 0.32 PFR28_05240 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_13110 putative transporter, required for glycine utilization (from data) 0.31 AO353_13885 bile acid:sodium symporter low > 101
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_08690 hypothetical protein 0.32 AO356_08085 bile acid:sodium symporter low > 104
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_3621 putative transporter, required for glycine utilization (from data) 0.32 Pf6N2E2_3491 Sodium/bile acid symporter family low > 103
Dickeya dianthicola 67-19 0.52 HGI48_RS10325 trimeric intracellular cation channel family protein 0.56 HGI48_RS10620 bile acid:sodium symporter low > 71
Dechlorosoma suillum PS 0.51 Dsui_0014 putative membrane protein 0.31 Dsui_0418 putative Na+-dependent transporter low > 51
Dickeya dianthicola ME23 0.51 DZA65_RS10800 trimeric intracellular cation channel family protein 0.56 DZA65_RS11100 bile acid:sodium symporter low > 75
Dickeya dadantii 3937 0.51 DDA3937_RS10315 trimeric intracellular cation channel family protein 0.57 DDA3937_RS10620 bile acid:sodium symporter low > 74
Pectobacterium carotovorum WPP14 0.50 HER17_RS11080 trimeric intracellular cation channel family protein 0.57 HER17_RS10785 bile acid:sodium symporter low > 75
Pseudomonas stutzeri RCH2 0.48 Psest_1636 putative transporter, required for glycine utilization (from data) 0.46 Psest_4207 Predicted Na+-dependent transporter low > 67
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS02545 membrane protein 0.55 HSERO_RS13635 membrane protein low > 78
Pontibacter actiniarum KMM 6156, DSM 19842 0.33 CA264_06085 hypothetical protein 0.24 CA264_01530 hypothetical protein low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.33 Echvi_1200 Predicted membrane protein 0.29 Echvi_3715 Predicted Na+-dependent transporter low > 79
Ralstonia solanacearum GMI1000 0.30 RS_RS11765 trimeric intracellular cation channel family protein 0.39 RS_RS12725 bile acid:sodium symporter low > 80
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS16075 trimeric intracellular cation channel family protein 0.41 ABZR87_RS00755 bile acid:sodium symporter family protein low > 80
Ralstonia solanacearum PSI07 0.30 RPSI07_RS13175 trimeric intracellular cation channel family protein 0.39 RPSI07_RS12190 bile acid:sodium symporter low > 81
Cupriavidus basilensis FW507-4G11 0.30 RR42_RS04305 membrane protein 0.42 RR42_RS03420 bile acid:sodium symporter low > 128
Paraburkholderia bryophila 376MFSha3.1 0.29 H281DRAFT_00171 Uncharacterized membrane protein YeiH 0.47 H281DRAFT_02114 solute carrier family 10 (sodium/bile acid cotransporter), member 7 low > 103
Burkholderia phytofirmans PsJN 0.28 BPHYT_RS05060 membrane protein 0.44 BPHYT_RS02065 membrane protein low > 109
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS03365 trimeric intracellular cation channel family protein 0.48 QEN71_RS00995 bile acid:sodium symporter family protein low > 153
Ralstonia solanacearum UW163 0.28 UW163_RS09495 trimeric intracellular cation channel family protein 0.37 UW163_RS08520 bile acid:sodium symporter
Ralstonia solanacearum IBSBF1503 0.28 RALBFv3_RS04175 trimeric intracellular cation channel family protein 0.38 RALBFv3_RS05105 bile acid:sodium symporter 0.31 31
Paraburkholderia graminis OAS925 0.28 ABIE53_001283 putative membrane protein YeiH 0.47 ABIE53_000558 sodium/bile acid cotransporter 7 low > 113
Agrobacterium fabrum C58 0.26 Atu0154 hypothetical protein 0.47 Atu3888 hypothetical protein low > 89
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.4770.1 FIG01211391: hypothetical protein 0.49 Xcc-8004.4834.1 Sodium - Bile acid symporter low > 74
Rhodanobacter sp. FW510-T8 0.24 OKGIIK_06540 Trimeric intracellular cation channel family protein 0.43 OKGIIK_16570 Bile acid:sodium symporter low > 52
Hydrogenophaga sp. GW460-11-11-14-LB1 0.24 GFF679 Putative membrane protein 0.46 GFF18 Sodium/bile acid symporter family low > 90
Azospirillum sp. SherDot2 0.23 MPMX19_04399 hypothetical protein 0.48 MPMX19_03934 hypothetical protein low > 112
Dyella japonica UNC79MFTsu3.2 0.22 ABZR86_RS05500 trimeric intracellular cation channel family protein 0.48 ABZR86_RS17040 bile acid:sodium symporter family protein low > 74

Not shown: 12 genomes with orthologs for GFF362 only; 13 genomes with orthologs for GFF2039 only