Conservation of cofitness between GFF3539 and GFF1624 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF3539 Phosphoenolpyruvate synthase (EC 2.7.9.2) 1.0 GFF1624 Protease II (EC 3.4.21.83) 0.36 10
Escherichia coli ECOR27 0.98 NOLOHH_17665 ppsA phosphoenolpyruvate synthase 0.91 NOLOHH_16890 ptrB oligopeptidase B low > 76
Escherichia coli ECRC62 0.98 BNILDI_16455 ppsA phosphoenolpyruvate synthase 0.91 BNILDI_15685 ptrB oligopeptidase B low > 75
Escherichia coli BW25113 0.98 b1702 pps phosphoenolpyruvate synthase (NCBI) 0.91 b1845 ptrB protease II (NCBI) low > 76
Escherichia coli ECRC101 0.97 MCAODC_18265 ppsA phosphoenolpyruvate synthase 0.91 MCAODC_19025 ptrB oligopeptidase B low > 87
Escherichia coli ECRC100 0.97 OKFHMN_27145 ppsA phosphoenolpyruvate synthase 0.91 OKFHMN_26380 ptrB oligopeptidase B low > 79
Escherichia coli ECRC99 0.97 KEDOAH_00965 ppsA phosphoenolpyruvate synthase 0.91 KEDOAH_01725 ptrB oligopeptidase B — —
Escherichia coli ECRC98 0.97 JDDGAC_01720 ppsA phosphoenolpyruvate synthase 0.91 JDDGAC_00955 ptrB oligopeptidase B low > 87
Escherichia coli ECRC102 0.97 NIAGMN_00920 ppsA phosphoenolpyruvate synthase 0.91 NIAGMN_01680 ptrB oligopeptidase B low > 80
Escherichia coli BL21 0.97 ECD_01671 phosphoenolpyruvate synthase 0.91 ECD_01816 protease II low > 61
Escherichia coli ECOR38 0.97 HEPCGN_05510 ppsA phosphoenolpyruvate synthase 0.91 HEPCGN_04780 ptrB oligopeptidase B low > 88
Escherichia fergusonii Becca 0.97 EFB2_02289 Phosphoenolpyruvate synthase 0.91 EFB2_02099 Protease 2 low > 86
Enterobacter asburiae PDN3 0.95 EX28DRAFT_1704 phosphoenolpyruvate synthase (EC 2.7.9.2) 0.85 EX28DRAFT_0709 Protease II 0.63 15
Enterobacter sp. TBS_079 0.95 MPMX20_01922 Phosphoenolpyruvate synthase 0.85 MPMX20_02752 Protease 2 low > 85
Klebsiella pneumoniae MKP103 0.95 KDGMDA_24285 phosphoenolpyruvate synthase 0.83 KDGMDA_25340 oligopeptidase B low > 95
Klebsiella michiganensis M5al 0.95 BWI76_RS17065 phosphoenolpyruvate synthase 0.83 BWI76_RS18075 oligopeptidase B low > 92
Erwinia amylovora T8 0.89 OLJFJH_14620 phosphoenolpyruvate synthase 0.68 OLJFJH_12920 oligopeptidase B low > 58
Pantoea sp. MT58 0.88 IAI47_10905 phosphoenolpyruvate synthase 0.72 IAI47_08515 prolyl oligopeptidase family serine peptidase low > 76
Pantoea agglomerans CFBP13505 P0401 0.88 PagCFBP13505_RS17685 phosphoenolpyruvate synthase 0.72 PagCFBP13505_RS02395 oligopeptidase B low > 74
Dickeya dianthicola 67-19 0.86 HGI48_RS12875 phosphoenolpyruvate synthase 0.62 HGI48_RS10180 prolyl oligopeptidase family serine peptidase low > 71
Dickeya dianthicola ME23 0.86 DZA65_RS13340 phosphoenolpyruvate synthase 0.62 DZA65_RS10595 prolyl oligopeptidase family serine peptidase low > 75
Pectobacterium carotovorum WPP14 0.86 HER17_RS08885 phosphoenolpyruvate synthase 0.65 HER17_RS11765 prolyl oligopeptidase family serine peptidase low > 75
Dickeya dadantii 3937 0.86 DDA3937_RS12805 phosphoenolpyruvate synthase 0.62 DDA3937_RS10150 prolyl oligopeptidase family serine peptidase low > 74
Rahnella sp. WP5 0.86 EX31_RS13935 phosphoenolpyruvate synthase 0.65 EX31_RS24750 prolyl oligopeptidase family serine peptidase low > 89
Serratia liquefaciens MT49 0.85 IAI46_11115 phosphoenolpyruvate synthase 0.66 IAI46_09975 prolyl oligopeptidase family serine peptidase low > 87
Shewanella amazonensis SB2B 0.77 Sama_2072 phosphoenolpyruvate synthase (RefSeq) 0.46 Sama_0144 oligopeptidase B (RefSeq) low > 62
Shewanella sp. ANA-3 0.76 Shewana3_1736 phosphoenolpyruvate synthase (RefSeq) 0.43 Shewana3_0135 oligopeptidase B (RefSeq) low > 73
Shewanella oneidensis MR-1 0.76 SO2644 ppsA phosphoenolpyruvate synthase (NCBI ptt file) 0.44 SO0144 ptrB protease II (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.76 Shew_1549 phosphoenolpyruvate synthase (RefSeq) 0.41 Shew_0039 oligopeptidase B (RefSeq) — —
Alteromonas macleodii MIT1002 0.75 MIT1002_01816 Phosphoenolpyruvate synthase 0.44 MIT1002_02578 Protease 2 low > 70
Kangiella aquimarina DSM 16071 0.71 B158DRAFT_1553 phosphoenolpyruvate synthase (EC 2.7.9.2) 0.45 B158DRAFT_2324 Protease II low > 40
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_19050 phosphoenolpyruvate synthase 0.21 CSW01_14340 S9 family peptidase low > 62
Pseudomonas sp. S08-1 0.71 OH686_01660 phosphoenolpyruvate synthase 0.34 OH686_05270 Protease II low > 80
Pseudomonas stutzeri RCH2 0.70 Psest_2316 phosphoenolpyruvate synthase 0.32 Psest_2655 Protease II low > 67
Pseudomonas aeruginosa PUPa3 0.70 DQ20_RS54620 ppsA;go_function=ATP phosphoenolpyruvate synthase 0.32 DQ20_RS52995 S9 family peptidase low > 101
Pseudomonas aeruginosa PA14 0.70 IKLFDK_08555 phosphoenolpyruvate synthase 0.32 IKLFDK_06190 peptidase S9 low > 98
Pseudomonas aeruginosa MRSN321 0.70 DY961_RS20540 ppsA;go_function=ATP phosphoenolpyruvate synthase 0.32 DY961_RS18855 S9 family peptidase low > 100
Pseudomonas putida KT2440 0.70 PP_2082 phosphoenolpyruvate synthetase 0.33 PP_4583 putative Peptidase low > 96
Pseudomonas sp. DMC3 0.70 GFF5236 Phosphoenolpyruvate synthase 0.32 GFF2321 Protease 2 low > 89
Pseudomonas sp. BP01 0.70 JOY50_RS22170 ppsA phosphoenolpyruvate synthase 0.33 JOY50_RS01480 S9 family peptidase low > 84
Pseudomonas segetis P6 0.70 ACVTMO_RS13015 ppsA phosphoenolpyruvate synthase 0.32 ACVTMO_RS14755 S9 family peptidase low > 75
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_00865 phosphoenolpyruvate synthase 0.33 AO353_17950 peptidase S9 low > 101
Pseudomonas sp. SVBP6 0.70 COO64_RS05380 ppsA phosphoenolpyruvate synthase 0.33 COO64_RS22275 S9 family peptidase low > 93
Pseudomonas syringae pv. syringae B728a 0.69 Psyr_2090 phosphoenolpyruvate synthase 0.33 Psyr_1574 oligopeptidase B, Serine peptidase, MEROPS family S09A low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.69 Psyr_2090 phosphoenolpyruvate synthase 0.33 Psyr_1574 oligopeptidase B, Serine peptidase, MEROPS family S09A low > 86
Pseudomonas fluorescens FW300-N1B4 0.69 Pf1N1B4_3826 Phosphoenolpyruvate synthase (EC 2.7.9.2) 0.33 Pf1N1B4_3357 Protease II (EC 3.4.21.83) low > 87
Pseudomonas simiae WCS417 0.69 PS417_21020 phosphoenolpyruvate synthase 0.33 PS417_07445 peptidase S9 low > 88
Pseudomonas lactucae CFBP13502 0.69 GEMAOFIL_04349 Phosphoenolpyruvate synthase 0.33 GEMAOFIL_01622 Protease 2 low > 96
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS22630 phosphoenolpyruvate synthase 0.32 PFLU_RS07530 S9 family peptidase low > 109
Pseudomonas fluorescens SBW25 0.69 PFLU_RS22630 phosphoenolpyruvate synthase 0.32 PFLU_RS07530 S9 family peptidase low > 109
Pseudomonas sp. RS175 0.69 PFR28_01038 Phosphoenolpyruvate synthase 0.33 PFR28_00723 Dipeptidyl aminopeptidase BI low > 88
Pseudomonas fluorescens GW456-L13 0.69 PfGW456L13_4112 Phosphoenolpyruvate synthase (EC 2.7.9.2) 0.32 PfGW456L13_4484 Protease II (EC 3.4.21.83) low > 87
Pseudomonas fluorescens FW300-N2C3 0.68 AO356_02825 phosphoenolpyruvate synthase 0.33 AO356_04360 peptidase S9 low > 104
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_2389 Phosphoenolpyruvate synthase (EC 2.7.9.2) 0.32 Pf6N2E2_2713 Protease II (EC 3.4.21.83) low > 103
Rhodanobacter sp000427505 FW510-R12 0.67 LRK53_RS12075 phosphoenolpyruvate synthase 0.10 LRK53_RS00625 prolyl oligopeptidase family serine peptidase low > 59
Rhodanobacter denitrificans FW104-10B01 0.66 LRK54_RS16870 phosphoenolpyruvate synthase 0.10 LRK54_RS07925 prolyl oligopeptidase family serine peptidase low > 59
Rhodanobacter denitrificans MT42 0.66 LRK55_RS16585 phosphoenolpyruvate synthase 0.10 LRK55_RS07655 prolyl oligopeptidase family serine peptidase low > 63
Lysobacter sp. OAE881 0.66 ABIE51_RS09520 phosphoenolpyruvate synthase 0.42 ABIE51_RS03010 S9 family peptidase low > 62
Rhodanobacter sp. FW510-T8 0.66 OKGIIK_07970 ppsA phosphoenolpyruvate synthase 0.11 OKGIIK_14405 Peptidase S9 low > 53
Xanthomonas campestris pv. campestris strain 8004 0.66 Xcc-8004.2412.1 Phosphoenolpyruvate synthase (EC 2.7.9.2) 0.42 Xcc-8004.842.1 Protease II (EC 3.4.21.83) low > 74
Dyella japonica UNC79MFTsu3.2 0.65 ABZR86_RS07250 phosphoenolpyruvate synthase 0.12 ABZR86_RS17900 prolyl oligopeptidase family serine peptidase low > 74

Not shown: 29 genomes with orthologs for GFF3539 only; 17 genomes with orthologs for GFF1624 only