Conservation of cofitness between Psest_3438 and Psest_1557 in Pseudomonas stutzeri RCH2

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3438 Glutamate dehydrogenase/leucine dehydrogenase 1.0 Psest_1557 Phosphoenolpyruvate carboxylase 0.38 1
Pseudomonas sp. SVBP6 0.85 COO64_RS03010 gdhA NADP-specific glutamate dehydrogenase 0.71 COO64_RS19495 ppc phosphoenolpyruvate carboxylase low > 93
Pseudomonas aeruginosa PA14 0.85 IKLFDK_00575 NADP-specific glutamate dehydrogenase 0.71 IKLFDK_18825 phosphoenolpyruvate carboxylase low > 98
Pseudomonas aeruginosa MRSN321 0.85 DY961_RS23495 gdhA;go_function=oxidoreductase NADP-specific glutamate dehydrogenase 0.71 DY961_RS14540 ppc;go_function=phosphoenolpyruvate phosphoenolpyruvate carboxylase low > 100
Pseudomonas aeruginosa PUPa3 0.85 DQ20_RS55960 gdhA;go_function=oxidoreductase NADP-specific glutamate dehydrogenase 0.71 DQ20_RS42585 ppc;go_function=phosphoenolpyruvate phosphoenolpyruvate carboxylase low > 101
Pseudomonas putida KT2440 0.84 PP_0675 glutamate dehydrogenase, NADP-dependent 0.70 PP_1505 Phosphoenolpyruvate carboxylase low > 96
Pseudomonas simiae WCS417 0.84 PS417_24260 glutamate dehydrogenase 0.72 PS417_06060 phosphoenolpyruvate carboxylase low > 88
Pseudomonas sp. DMC3 0.84 GFF3966 NADP-specific glutamate dehydrogenase 0.71 GFF2023 Phosphoenolpyruvate carboxylase low > 89
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS26175 NADP-specific glutamate dehydrogenase 0.72 PFLU_RS06130 phosphoenolpyruvate carboxylase 0.20 45
Pseudomonas fluorescens SBW25 0.84 PFLU_RS26175 NADP-specific glutamate dehydrogenase 0.72 PFLU_RS06130 phosphoenolpyruvate carboxylase low > 109
Pseudomonas sp. BP01 0.84 JOY50_RS24645 gdhA NADP-specific glutamate dehydrogenase 0.69 JOY50_RS26030 ppc phosphoenolpyruvate carboxylase low > 84
Pseudomonas fluorescens GW456-L13 0.83 PfGW456L13_1455 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) 0.71 PfGW456L13_4740 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) low > 87
Pseudomonas orientalis W4I3 0.83 QF045_RS26525 NADP-specific glutamate dehydrogenase 0.71 QF045_RS08910 phosphoenolpyruvate carboxylase low > 93
Pseudomonas lactucae CFBP13502 0.83 GEMAOFIL_04998 NADP-specific glutamate dehydrogenase 0.72 GEMAOFIL_01382 Phosphoenolpyruvate carboxylase low > 96
Dechlorosoma suillum PS 0.75 Dsui_3211 glutamate dehydrogenase/leucine dehydrogenase 0.26 Dsui_1603 phosphoenolpyruvate carboxylase — —
Acinetobacter radioresistens SK82 0.70 MPMX26_02304 NADP-specific glutamate dehydrogenase 0.50 MPMX26_03013 Phosphoenolpyruvate carboxylase low > 36
Acinetobacter baumannii LAC-4 0.69 RR41_RS09055 NADP-specific glutamate dehydrogenase 0.49 RR41_RS00155 phosphoenolpyruvate carboxylase low > 55
Castellaniella sp019104865 MT123 0.68 ABCV34_RS06190 NADP-specific glutamate dehydrogenase 0.22 ABCV34_RS14805 phosphoenolpyruvate carboxylase low > 48
Klebsiella pneumoniae MKP103 0.68 KDGMDA_19295 NADP-specific glutamate dehydrogenase 0.51 KDGMDA_09355 phosphoenolpyruvate carboxylase low > 95
Klebsiella michiganensis M5al 0.68 BWI76_RS11610 glutamate dehydrogenase 0.51 BWI76_RS00835 phosphoenolpyruvate carboxylase 0.21 48
Cupriavidus basilensis FW507-4G11 0.67 RR42_RS33640 glutamate dehydrogenase 0.23 RR42_RS15905 phosphoenolpyruvate carboxylase low > 128
Pectobacterium carotovorum WPP14 0.67 HER17_RS21320 NADP-specific glutamate dehydrogenase 0.51 HER17_RS20655 phosphoenolpyruvate carboxylase low > 75
Enterobacter asburiae PDN3 0.67 EX28DRAFT_1763 Glutamate dehydrogenase/leucine dehydrogenase 0.50 EX28DRAFT_4418 Phosphoenolpyruvate carboxylase, type 1 (EC 4.1.1.31) low > 76
Escherichia coli BL21 0.67 ECD_01730 glutamate dehydrogenase, NADP-specific 0.51 ECD_03841 phosphoenolpyruvate carboxylase — —
Escherichia coli BW25113 0.67 b1761 gdhA glutamate dehydrogenase (NCBI) 0.51 b3956 ppc phosphoenolpyruvate carboxylase (NCBI) low > 76
Rahnella sp. WP5 0.67 EX31_RS08255 NADP-specific glutamate dehydrogenase 0.50 EX31_RS14200 phosphoenolpyruvate carboxylase low > 89
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_01971 NADP-specific glutamate dehydrogenase 0.51 OHPLBJKB_04094 Phosphoenolpyruvate carboxylase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.67 GFF3487 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) 0.51 GFF2342 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) low > 78
Cellulophaga baltica 18 0.67 M666_RS03780 NADP-specific glutamate dehydrogenase 0.09 M666_RS09030 phosphoenolpyruvate carboxylase low > 67
Escherichia coli ECRC98 0.67 JDDGAC_01415 gdhA NADP-specific glutamate dehydrogenase 0.51 JDDGAC_17220 ppc phosphoenolpyruvate carboxylase low > 87
Escherichia coli ECRC100 0.67 OKFHMN_26840 gdhA NADP-specific glutamate dehydrogenase 0.51 OKFHMN_13595 ppc phosphoenolpyruvate carboxylase 0.70 5
Escherichia coli ECRC99 0.67 KEDOAH_01270 gdhA NADP-specific glutamate dehydrogenase 0.51 KEDOAH_14565 ppc phosphoenolpyruvate carboxylase — —
Escherichia coli ECRC102 0.67 NIAGMN_01225 gdhA NADP-specific glutamate dehydrogenase 0.51 NIAGMN_11345 ppc phosphoenolpyruvate carboxylase low > 80
Escherichia coli ECRC101 0.67 MCAODC_18570 gdhA NADP-specific glutamate dehydrogenase 0.51 MCAODC_04095 ppc phosphoenolpyruvate carboxylase 0.44 14
Enterobacter sp. TBS_079 0.66 MPMX20_01854 NADP-specific glutamate dehydrogenase 0.50 MPMX20_04524 Phosphoenolpyruvate carboxylase 0.28 50
Escherichia coli ECOR27 0.66 NOLOHH_17355 gdhA NADP-specific glutamate dehydrogenase 0.51 NOLOHH_05740 ppc phosphoenolpyruvate carboxylase low > 76
Escherichia coli ECRC62 0.66 BNILDI_16140 gdhA NADP-specific glutamate dehydrogenase 0.51 BNILDI_05785 ppc phosphoenolpyruvate carboxylase low > 75
Escherichia coli ECOR38 0.66 HEPCGN_05205 gdhA NADP-specific glutamate dehydrogenase 0.51 HEPCGN_12240 ppc phosphoenolpyruvate carboxylase low > 88
Escherichia coli Nissle 1917 0.66 ECOLIN_RS09810 NADP-specific glutamate dehydrogenase 0.51 ECOLIN_RS22835 phosphoenolpyruvate carboxylase — —
Escherichia fergusonii Becca 0.66 EFB2_02232 NADP-specific glutamate dehydrogenase 0.51 EFB2_04658 Phosphoenolpyruvate carboxylase 0.30 82
Acidovorax sp. GW101-3H11 0.66 Ac3H11_315 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) 0.24 Ac3H11_3553 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) low > 79
Serratia liquefaciens MT49 0.66 IAI46_24165 NADP-specific glutamate dehydrogenase 0.51 IAI46_24525 phosphoenolpyruvate carboxylase low > 87
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF5486 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) 0.25 GFF115 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) low > 90
Variovorax sp. SCN45 0.66 GFF3009 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) 0.23 GFF3838 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) low > 127
Bifidobacterium breve UCC2003 0.58 BBR_RS10310 NADP-specific glutamate dehydrogenase 0.17 BBR_RS10525 phosphoenolpyruvate carboxylase — —
Alteromonas macleodii MIT1002 0.53 MIT1002_01876 NAD-specific glutamate dehydrogenase 0.48 MIT1002_03491 Phosphoenolpyruvate carboxylase low > 70
Ralstonia solanacearum PSI07 0.21 RPSI07_RS21660 Glu/Leu/Phe/Val dehydrogenase 0.24 RPSI07_RS13100 phosphoenolpyruvate carboxylase low > 81
Ralstonia solanacearum GMI1000 0.20 RS_RS02380 Glu/Leu/Phe/Val dehydrogenase 0.24 RS_RS11840 phosphoenolpyruvate carboxylase low > 80
Ralstonia solanacearum IBSBF1503 0.20 RALBFv3_RS11550 Glu/Leu/Phe/Val dehydrogenase 0.24 RALBFv3_RS04250 phosphoenolpyruvate carboxylase — —
Ralstonia solanacearum UW163 0.20 UW163_RS02035 Glu/Leu/Phe/Val dehydrogenase 0.24 UW163_RS09420 phosphoenolpyruvate carboxylase — —
Paraburkholderia sabiae LMG 24235 0.20 QEN71_RS26890 Glu/Leu/Phe/Val dehydrogenase 0.22 QEN71_RS24955 phosphoenolpyruvate carboxylase — —
Variovorax sp. OAS795 0.20 ABID97_RS00235 Glu/Leu/Phe/Val dehydrogenase 0.23 ABID97_RS08220 phosphoenolpyruvate carboxylase low > 91
Ralstonia sp. UNC404CL21Col 0.20 ABZR87_RS07515 Glu/Leu/Phe/Val dehydrogenase 0.24 ABZR87_RS16140 phosphoenolpyruvate carboxylase — —
Burkholderia phytofirmans PsJN 0.20 BPHYT_RS16705 glutamate dehydrogenase 0.23 BPHYT_RS05225 phosphoenolpyruvate carboxylase — —
Pantoea sp. MT58 0.20 IAI47_20110 Glu/Leu/Phe/Val dehydrogenase 0.50 IAI47_00895 phosphoenolpyruvate carboxylase low > 76
Pantoea agglomerans CFBP13505 P0401 0.20 PagCFBP13505_RS08470 Glu/Leu/Phe/Val dehydrogenase 0.50 PagCFBP13505_RS18445 phosphoenolpyruvate carboxylase low > 74
Paraburkholderia graminis OAS925 0.20 ABIE53_003511 glutamate dehydrogenase (NAD(P)+) 0.24 ABIE53_001314 phosphoenolpyruvate carboxylase low > 113
Erwinia tracheiphila SCR3 0.19 LU632_RS12465 Glu/Leu/Phe/Val dehydrogenase 0.50 LU632_RS19625 ppc phosphoenolpyruvate carboxylase low > 73
Paraburkholderia bryophila 376MFSha3.1 0.19 H281DRAFT_04271 glutamate dehydrogenase (NAD(P)+) 0.24 H281DRAFT_00197 Phosphoenolpyruvate carboxylase, type 1 — —
Erwinia tracheiphila HP pepo 2.2 0.19 IJEDHG_23815 glutamate dehydrogenase 0.50 IJEDHG_13035 ppc phosphoenolpyruvate carboxylase low > 61
Echinicola vietnamensis KMM 6221, DSM 17526 0.19 Echvi_1535 Glutamate dehydrogenase/leucine dehydrogenase 0.11 Echvi_3727 Phosphoenolpyruvate carboxylase low > 79
Synechocystis sp000284455 PCC 6803 0.19 SGL_RS16330 NADP-specific glutamate dehydrogenase 0.23 SGL_RS11290 phosphoenolpyruvate carboxylase — —
Erwinia amylovora T8 0.19 OLJFJH_14210 glutamate dehydrogenase 0.49 OLJFJH_06110 Phosphoenolpyruvate carboxylase low > 58
Herbaspirillum seropedicae SmR1 0.19 HSERO_RS19260 glutamate dehydrogenase 0.23 HSERO_RS14670 phosphoenolpyruvate carboxylase — —

Not shown: 11 genomes with orthologs for Psest_3438 only; 38 genomes with orthologs for Psest_1557 only