Conservation of cofitness between Psest_1542 and Psest_1541 in Pseudomonas stutzeri RCH2

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_1542 Uncharacterized proteins, homologs of lactam utilization protein B 1.0 Psest_1541 TIGR00370 family protein 0.65 2
Pseudomonas segetis P6 0.83 MPMX49_01595 5-oxoprolinase subunit A 3 0.77 MPMX49_01594 5-oxoprolinase subunit B low > 75
Pseudomonas sp. RS175 0.75 PFR28_00728 5-oxoprolinase subunit A 3 0.68 PFR28_00729 5-oxoprolinase subunit B 0.92 1
Pseudomonas sp. SVBP6 0.75 COO64_RS22245 5-oxoprolinase subunit PxpA 0.67 COO64_RS22240 pxpB 5-oxoprolinase subunit PxpB low > 93
Pseudomonas fluorescens GW456-L13 0.75 PfGW456L13_4478 Lactam utilization protein LamB 0.66 PfGW456L13_4477 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) 0.49 14
Pseudomonas orientalis W4I3 0.74 QF045_RS10120 5-oxoprolinase subunit PxpA 0.71 QF045_RS10125 5-oxoprolinase subunit PxpB low > 93
Pseudomonas fluorescens FW300-N2C3 0.74 AO356_04335 hypothetical protein 0.67 AO356_04330 allophanate hydrolase 0.88 1
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_17995 hypothetical protein 0.67 AO353_18000 allophanate hydrolase 0.41 2
Pseudomonas lactucae CFBP13502 0.74 GEMAOFIL_01627 5-oxoprolinase subunit A 3 0.70 GEMAOFIL_01628 5-oxoprolinase subunit B low > 96
Pseudomonas fluorescens FW300-N1B4 0.74 Pf1N1B4_3366 Lactam utilization protein LamB 0.68 Pf1N1B4_3367 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) 0.26 52
Pseudomonas sp. DMC3 0.74 GFF2327 5-oxoprolinase subunit A 3 0.69 GFF2328 5-oxoprolinase subunit B low > 89
Pseudomonas fluorescens SBW25-INTG 0.74 PFLU_RS07555 LamB/YcsF family protein 0.70 PFLU_RS07560 allophanate hydrolase subunit 1 0.55 1
Pseudomonas fluorescens SBW25 0.74 PFLU_RS07555 LamB/YcsF family protein 0.70 PFLU_RS07560 allophanate hydrolase subunit 1 low > 109
Pseudomonas simiae WCS417 0.73 PS417_07470 hypothetical protein 0.70 PS417_07475 allophanate hydrolase — —
Pseudomonas fluorescens FW300-N2E2 0.73 Pf6N2E2_2708 Lactam utilization protein LamB 0.67 Pf6N2E2_2707 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) 0.74 1
Pseudomonas aeruginosa PA14 0.72 IKLFDK_10305 5-oxoprolinase subunit A 2 0.59 IKLFDK_10300 allophanate hydrolase — —
Pseudomonas sp. BP01 0.72 JOY50_RS01450 5-oxoprolinase subunit PxpA 0.65 JOY50_RS01445 pxpB 5-oxoprolinase subunit PxpB low > 84
Pseudomonas putida KT2440 0.71 PP_4577 UPF0271 protein PP_4577 0.64 PP_4576 allophanate hydrolase subunit 0.58 1
Pseudomonas aeruginosa MRSN321 0.69 DY961_RS16780 5-oxoprolinase subunit PxpA 0.59 DY961_RS16775 allophanate hydrolase subunit 1 0.26 68
Pseudomonas aeruginosa PUPa3 0.69 DQ20_RS39065 5-oxoprolinase subunit PxpA 0.58 DQ20_RS39060 allophanate hydrolase subunit 1 0.45 3
Pseudomonas sp. S08-1 0.57 OH686_08750 Lactam utilization protein LamB 0.38 OH686_08745 Allophanate hydrolase 2 subunit 1 low > 80
Marinobacter adhaerens HP15 0.54 HP15_2685 UPF0271 protein, LamB/YcsF family 0.43 HP15_2686 allophanate hydrolase subunit 1 0.78 2
Vibrio cholerae E7946 ATCC 55056 0.54 CSW01_18055 hypothetical protein 0.32 CSW01_18060 allophanate hydrolase low > 62
Alteromonas macleodii MIT1002 0.47 MIT1002_02298 LamB/YcsF family protein 0.30 MIT1002_02297 Sporulation inhibitor KipI 0.87 8
Rhodopseudomonas palustris CGA009 0.43 TX73_013895 LamB/YcsF family protein 0.24 TX73_013905 5-oxoprolinase subunit PxpB low > 86
Rhodanobacter sp. FW510-T8 0.39 OKGIIK_04730 5-oxoprolinase subunit A 0.25 OKGIIK_04740 pxpB 5-oxoprolinase subunit PxpB low > 53
Variovorax sp. SCN45 0.39 GFF5546 Lactam utilization protein LamB 0.30 GFF2322 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) low > 127
Phaeobacter inhibens DSM 17395 0.39 PGA1_c28700 LamB/YcsF family protein 0.21 PGA1_c28720 allophanate hydrolase, subunit 1 low > 62
Azospirillum sp. SherDot2 0.37 MPMX19_04959 5-oxoprolinase subunit A 0.28 MPMX19_04956 5-oxoprolinase subunit B low > 112
Pedobacter sp. GW460-11-11-14-LB5 0.37 CA265_RS10100 lactam utilization protein LamB 0.27 CA265_RS10110 hypothetical protein low > 88
Variovorax sp. OAS795 0.36 ABID97_RS23840 5-oxoprolinase subunit PxpA 0.30 ABID97_RS01245 5-oxoprolinase subunit PxpB low > 91
Mucilaginibacter yixingensis YX-36 DSM 26809 0.35 ABZR88_RS12605 5-oxoprolinase subunit PxpA 0.33 ABZR88_RS12615 5-oxoprolinase subunit PxpB low > 71
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS00650 hypothetical protein 0.28 RR42_RS00640 allophanate hydrolase 0.35 19
Dinoroseobacter shibae DFL-12 0.35 Dshi_2026 LamB/YcsF family protein (RefSeq) 0.14 Dshi_2028 Allophanate hydrolase subunit 1 (RefSeq) low > 64
Rahnella sp. WP5 0.34 EX31_RS15535 LamB/YcsF family protein 0.25 EX31_RS23385 5-oxoprolinase subunit PxpB low > 89
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS28660 5-oxoprolinase subunit PxpA 0.29 QEN71_RS28650 5-oxoprolinase subunit PxpB low > 153
Paraburkholderia graminis OAS925 0.34 ABIE53_000049 UPF0271 protein 0.31 ABIE53_000047 KipI family sensor histidine kinase inhibitor 0.20 52
Shewanella amazonensis SB2B 0.33 Sama_0021 hypothetical protein (RefSeq) 0.28 Sama_0023 hypothetical protein (RefSeq) low > 62
Enterobacter sp. TBS_079 0.33 MPMX20_01347 5-oxoprolinase subunit A 0.24 MPMX20_01345 5-oxoprolinase subunit B 0.25 32
Kangiella aquimarina DSM 16071 0.33 B158DRAFT_1994 Uncharacterized proteins, homologs of lactam utilization protein B 0.36 B158DRAFT_1993 TIGR00370 family protein low > 40
Dickeya dadantii 3937 0.33 DDA3937_RS06425 5-oxoprolinase subunit PxpA 0.27 DDA3937_RS06415 5-oxoprolinase subunit PxpB low > 74
Burkholderia phytofirmans PsJN 0.32 BPHYT_RS18635 LamB/YcsF family protein 0.30 BPHYT_RS18625 allophanate hydrolase low > 109
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.32 GFF4618 Lactam utilization protein LamB 0.27 GFF4616 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) low > 78
Escherichia coli ECRC101 0.32 MCAODC_26215 pxpA 5-oxoprolinase subunit PxpA 0.26 MCAODC_26225 pxpB 5-oxoprolinase subunit PxpB low > 87
Escherichia coli ECRC99 0.32 KEDOAH_20970 pxpA 5-oxoprolinase subunit PxpA 0.26 KEDOAH_20960 pxpB 5-oxoprolinase subunit PxpB — —
Escherichia coli ECRC100 0.32 OKFHMN_06995 pxpA 5-oxoprolinase subunit PxpA 0.26 OKFHMN_07005 pxpB 5-oxoprolinase subunit PxpB low > 79
Escherichia coli ECRC98 0.32 JDDGAC_10650 pxpA 5-oxoprolinase subunit PxpA 0.26 JDDGAC_10660 pxpB 5-oxoprolinase subunit PxpB low > 87
Escherichia coli ECOR27 0.32 NOLOHH_23380 pxpA 5-oxoprolinase subunit PxpA 0.26 NOLOHH_23390 pxpB 5-oxoprolinase subunit PxpB low > 76
Escherichia coli BL21 0.32 ECD_00673 UPF0271 family protein 0.26 ECD_00671 putative allophanate hydrolase, subunit 1 low > 61
Escherichia coli ECRC62 0.32 BNILDI_21375 pxpA 5-oxoprolinase subunit PxpA 0.26 BNILDI_21385 pxpB 5-oxoprolinase subunit PxpB low > 75
Escherichia coli ECRC102 0.32 NIAGMN_05050 pxpA 5-oxoprolinase subunit PxpA 0.26 NIAGMN_05060 pxpB 5-oxoprolinase subunit PxpB low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.32 OHPLBJKB_03004 hypothetical protein 0.26 OHPLBJKB_03006 putative protein YbgJ low > 74
Escherichia coli BW25113 0.32 b0713 ybgL hypothetical protein (NCBI) 0.26 b0711 ybgJ predicted enzyme subunit (NCBI) low > 76
Enterobacter asburiae PDN3 0.31 EX28DRAFT_2274 Uncharacterized proteins, homologs of lactam utilization protein B 0.25 EX28DRAFT_2276 sensor histidine kinase inhibitor, KipI family low > 76
Pantoea sp. MT58 0.31 IAI47_13795 5-oxoprolinase subunit PxpA 0.27 IAI47_13805 5-oxoprolinase subunit PxpB low > 76
Lysobacter sp. OAE881 0.31 ABIE51_RS08130 5-oxoprolinase subunit PxpA 0.30 ABIE51_RS08145 5-oxoprolinase subunit PxpB low > 62
Escherichia coli Nissle 1917 0.31 ECOLIN_RS03815 5-oxoprolinase subunit PxpA 0.27 ECOLIN_RS03805 5-oxoprolinase subunit PxpB low > 55
Escherichia fergusonii Becca 0.31 EFB2_03390 5-oxoprolinase subunit A 0.27 EFB2_03392 5-oxoprolinase subunit B low > 86
Escherichia coli ECOR38 0.30 HEPCGN_01215 pxpA 5-oxoprolinase subunit PxpA 0.26 HEPCGN_01205 pxpB 5-oxoprolinase subunit PxpB low > 88
Pantoea agglomerans CFBP13505 P0401 0.30 PagCFBP13505_RS03510 5-oxoprolinase subunit PxpA 0.27 PagCFBP13505_RS03500 5-oxoprolinase subunit PxpB 0.85 2
Echinicola vietnamensis KMM 6221, DSM 17526 0.30 Echvi_3010 Uncharacterized proteins, homologs of lactam utilization protein B 0.21 Echvi_3009 TIGR00370 family protein low > 79
Klebsiella pneumoniae MKP103 0.30 KDGMDA_16680 5-oxoprolinase subunit PxpA 0.27 KDGMDA_16670 5-oxoprolinase subunit PxpB low > 95
Erwinia amylovora T8 0.29 OLJFJH_16995 5-oxoprolinase subunit PxpA 0.28 OLJFJH_17005 5-oxoprolinase subunit PxpB low > 58

Not shown: 25 genomes with orthologs for Psest_1542 only; 1 genomes with orthologs for Psest_1541 only