Conservation of cofitness between Psest_1505 and Psest_1506 in Pseudomonas stutzeri RCH2

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_1505 Organic radical activating enzymes 1.0 Psest_1506 queuosine biosynthesis protein QueC 0.58 1
Pseudomonas sp. S08-1 0.84 OH686_19175 7-carboxy-7-deazaguanine synthase 0.85 OH686_19180 queuosine biosynthesis protein QueC low > 80
Pseudomonas sp. RS175 0.81 PFR28_03404 7-carboxy-7-deazaguanine synthase 0.88 PFR28_03403 7-cyano-7-deazaguanine synthase 0.19 70
Pseudomonas fluorescens SBW25 0.80 PFLU_RS24045 7-carboxy-7-deazaguanine synthase QueE 0.86 PFLU_RS24040 7-cyano-7-deazaguanine synthase QueC low > 109
Pseudomonas fluorescens SBW25-INTG 0.80 PFLU_RS24045 7-carboxy-7-deazaguanine synthase QueE 0.86 PFLU_RS24040 7-cyano-7-deazaguanine synthase QueC 0.47 2
Pseudomonas fluorescens FW300-N2C3 0.80 AO356_18065 7-carboxy-7-deazaguanine synthase 0.88 AO356_18070 7-cyano-7-deazaguanine synthase 0.56 3
Pseudomonas fluorescens FW300-N1B4 0.80 Pf1N1B4_629 Queuosine Biosynthesis QueE Radical SAM 0.87 Pf1N1B4_628 Queuosine Biosynthesis QueC ATPase low > 87
Pseudomonas putida KT2440 0.80 PP_1225 7-carboxy-7-deazaguanine synthase 0.87 PP_1226 pre-queuosine 0 synthase 0.31 2
Pseudomonas syringae pv. syringae B728a ΔmexB 0.79 Psyr_1418 Radical SAM 0.85 Psyr_1419 preQ(0) biosynthesis protein QueC — —
Pseudomonas syringae pv. syringae B728a 0.79 Psyr_1418 Radical SAM 0.85 Psyr_1419 preQ(0) biosynthesis protein QueC 0.27 61
Pseudomonas simiae WCS417 0.79 PS417_22405 7-carboxy-7-deazaguanine synthase 0.87 PS417_22400 7-cyano-7-deazaguanine synthase 0.67 1
Pseudomonas fluorescens GW456-L13 0.79 PfGW456L13_1861 Queuosine Biosynthesis QueE Radical SAM 0.85 PfGW456L13_1862 Queuosine Biosynthesis QueC ATPase 0.53 1
Pseudomonas fluorescens FW300-N2E3 0.79 AO353_03540 7-carboxy-7-deazaguanine synthase 0.88 AO353_03535 7-cyano-7-deazaguanine synthase low > 101
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_5545 Queuosine Biosynthesis QueE Radical SAM 0.89 Pf6N2E2_5546 Queuosine Biosynthesis QueC ATPase 0.64 2
Xanthomonas campestris pv. campestris strain 8004 0.64 Xcc-8004.1449.1 Queuosine Biosynthesis QueE Radical SAM 0.68 Xcc-8004.1450.1 Queuosine Biosynthesis QueC ATPase low > 74
Lysobacter sp. OAE881 0.62 ABIE51_RS05100 7-carboxy-7-deazaguanine synthase QueE 0.70 ABIE51_RS05105 7-cyano-7-deazaguanine synthase QueC 0.49 2
Acinetobacter radioresistens SK82 0.61 MPMX26_02174 7-carboxy-7-deazaguanine synthase 0.60 MPMX26_02175 7-cyano-7-deazaguanine synthase 0.94 1
Dyella japonica UNC79MFTsu3.2 0.61 ABZR86_RS10790 7-carboxy-7-deazaguanine synthase QueE 0.66 ABZR86_RS10785 7-cyano-7-deazaguanine synthase QueC 0.69 2
Dechlorosoma suillum PS 0.59 Dsui_0476 organic radical activating enzyme 0.66 Dsui_0549 queuosine biosynthesis protein QueC 0.59 7
Rhodanobacter sp. FW510-T8 0.58 OKGIIK_01890 7-carboxy-7-deazaguanine synthase 0.68 OKGIIK_01895 queC 7-cyano-7-deazaguanine synthase QueC low > 52
Rhodanobacter denitrificans FW104-10B01 0.57 LRK54_RS04860 7-carboxy-7-deazaguanine synthase QueE 0.69 LRK54_RS04855 7-cyano-7-deazaguanine synthase QueC 0.57 1
Rhodanobacter denitrificans MT42 0.57 LRK55_RS04640 7-carboxy-7-deazaguanine synthase QueE 0.69 LRK55_RS04635 7-cyano-7-deazaguanine synthase QueC 0.71 5
Kangiella aquimarina DSM 16071 0.56 B158DRAFT_1144 Organic radical activating enzymes 0.69 B158DRAFT_1146 preQ(0) biosynthesis protein QueC 0.76 3
Phaeobacter inhibens DSM 17395 0.18 PGA1_c05620 putative 7-cyano-7-deazaguanosine biosynthesis protein QueE 0.28 PGA1_c05600 queuosine biosynthesis protein QueC 0.36 53
Phocaeicola dorei CL03T12C01 0.18 ABI39_RS10600 radical SAM protein 0.29 ABI39_RS11300 7-cyano-7-deazaguanine synthase QueC 0.29 8
Serratia liquefaciens MT49 0.17 IAI46_03675 7-carboxy-7-deazaguanine synthase QueE 0.31 IAI46_05045 7-cyano-7-deazaguanine synthase QueC low > 86
Bacteroides stercoris CC31F 0.16 HMPREF1181_RS13885 radical SAM protein 0.28 HMPREF1181_RS11150 7-cyano-7-deazaguanine synthase QueC low > 56
Shewanella amazonensis SB2B 0.16 Sama_1825 radical activating enzyme (RefSeq) 0.31 Sama_1826 ExsB protein (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.16 MIT1002_01264 7-carboxy-7-deazaguanine synthase 0.33 MIT1002_01263 7-cyano-7-deazaguanine synthase 0.91 3
Shewanella sp. ANA-3 0.16 Shewana3_2163 radical activating enzyme (RefSeq) 0.29 Shewana3_2164 queuosine biosynthesis protein QueC (RefSeq) low > 73
Rahnella sp. WP5 0.16 EX31_RS07920 7-carboxy-7-deazaguanine synthase QueE 0.32 EX31_RS22280 7-cyano-7-deazaguanine synthase QueC low > 89
Enterobacter sp. TBS_079 0.16 MPMX20_03645 7-carboxy-7-deazaguanine synthase 0.33 MPMX20_01035 7-cyano-7-deazaguanine synthase low > 85
Pantoea sp. MT58 0.16 IAI47_04140 7-carboxy-7-deazaguanine synthase QueE 0.32 IAI47_14620 7-cyano-7-deazaguanine synthase QueC low > 76
Escherichia coli Nissle 1917 0.16 ECOLIN_RS15475 7-carboxy-7-deazaguanine synthase QueE 0.33 ECOLIN_RS02660 7-cyano-7-deazaguanine synthase QueC — —
Escherichia fergusonii Becca 0.16 EFB2_01141 7-carboxy-7-deazaguanine synthase 0.33 EFB2_03613 7-cyano-7-deazaguanine synthase low > 86
Escherichia coli ECOR38 0.16 HEPCGN_19205 queE 7-carboxy-7-deazaguanine synthase QueE 0.33 HEPCGN_06910 queC 7-cyano-7-deazaguanine synthase QueC low > 85
Pectobacterium carotovorum WPP14 0.16 HER17_RS04200 7-carboxy-7-deazaguanine synthase QueE 0.32 HER17_RS15815 7-cyano-7-deazaguanine synthase QueC low > 75
Enterobacter asburiae PDN3 0.15 EX28DRAFT_2855 putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 0.33 EX28DRAFT_2526 queuosine biosynthesis protein QueC low > 76
Escherichia coli BW25113 0.15 b2777 ygcF hypothetical protein (NCBI) 0.33 b0444 ybaX predicted aluminum resistance protein (NCBI) low > 76
Escherichia coli ECRC98 0.15 JDDGAC_23965 queE 7-carboxy-7-deazaguanine synthase QueE 0.32 JDDGAC_11950 queC 7-cyano-7-deazaguanine synthase QueC — —
Escherichia coli BL21 0.15 ECD_02622 7-carboxy-7-deazaguanine synthase; queosine biosynthesis 0.32 ECD_00396 7-cyano-7-deazaguanine (preQ0) synthase; queuosine biosynthesis low > 60
Escherichia coli ECRC99 0.15 KEDOAH_07830 queE 7-carboxy-7-deazaguanine synthase QueE 0.32 KEDOAH_19670 queC 7-cyano-7-deazaguanine synthase QueC — —
Escherichia coli ECRC101 0.15 MCAODC_10825 queE 7-carboxy-7-deazaguanine synthase QueE 0.32 MCAODC_27520 queC 7-cyano-7-deazaguanine synthase QueC — —
Escherichia coli ECRC101 0.15 OKFHMN_20300 queE 7-carboxy-7-deazaguanine synthase QueE 0.32 OKFHMN_08295 queC 7-cyano-7-deazaguanine synthase QueC — —
Escherichia coli ECRC102 0.15 NIAGMN_18070 queE 7-carboxy-7-deazaguanine synthase QueE 0.32 NIAGMN_06350 queC 7-cyano-7-deazaguanine synthase QueC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.15 OHPLBJKB_00957 7-carboxy-7-deazaguanine synthase 0.33 OHPLBJKB_03229 7-cyano-7-deazaguanine synthase low > 73
Erwinia tracheiphila SCR3 0.15 LU632_RS06390 queE 7-carboxy-7-deazaguanine synthase QueE 0.30 LU632_RS18310 queC 7-cyano-7-deazaguanine synthase QueC low > 74
Klebsiella michiganensis M5al 0.15 BWI76_RS22780 7-carboxy-7-deazaguanine synthase QueE 0.33 BWI76_RS06560 7-cyano-7-deazaguanine synthase QueC low > 92
Escherichia coli ECRC62 0.15 BNILDI_10675 queE 7-carboxy-7-deazaguanine synthase QueE 0.33 BNILDI_22645 queC 7-cyano-7-deazaguanine synthase QueC — —
Escherichia coli ECOR27 0.15 NOLOHH_12170 queE 7-carboxy-7-deazaguanine synthase QueE 0.33 NOLOHH_01230 queC 7-cyano-7-deazaguanine synthase QueC low > 57
Sinorhizobium meliloti 1021 0.15 SM_b20938 hypothetical protein 0.29 SM_b20940 hypothetical protein low > 103
Desulfovibrio vulgaris Hildenborough JW710 0.12 DVU2658 conserved hypothetical protein (TIGR) 0.23 DVU2659 exsB protein (TIGR) 0.68 1

Not shown: 1 genomes with orthologs for Psest_1505 only; 42 genomes with orthologs for Psest_1506 only