| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas simiae WCS417 | 1.0 | PS417_04385 | | organic solvent ABC transporter substrate-binding protein | 1.0 | PS417_06775 | | antibiotic transporter | 0.42 | 6 |
| Pseudomonas fluorescens SBW25-INTG | 0.89 | PFLU_RS04440 | | outer membrane lipid asymmetry maintenance protein MlaD | 0.92 | PFLU_RS06810 | | efflux RND transporter periplasmic adaptor subunit | 0.37 | 39 |
| Pseudomonas fluorescens SBW25 | 0.89 | PFLU_RS04440 | | outer membrane lipid asymmetry maintenance protein MlaD | 0.92 | PFLU_RS06810 | | efflux RND transporter periplasmic adaptor subunit | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.83 | AO353_05140 | | outer membrane lipid asymmetry maintenance protein MlaD | 0.77 | AO353_17300 | | antibiotic transporter | 0.45 | 22 |
| Pseudomonas putida KT2440 | 0.82 | PP_0960 | | phospholipid ABC transporter binding protein | 0.74 | PP_1386 | | Probable efflux pump periplasmic linker TtgA | 0.46 | 14 |
| Pseudomonas fluorescens GW456-L13 | 0.82 | PfGW456L13_5006 | | Uncharacterized ABC transporter, periplasmic component YrbD | 0.75 | PfGW456L13_4580 | | Multidrug efflux RND membrane fusion protein MexC | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.81 | Pf1N1B4_1072 | | Uncharacterized ABC transporter, periplasmic component YrbD | 0.79 | Pf1N1B4_3247 | | Multidrug efflux RND membrane fusion protein MexC | — | — |
| Pseudomonas sp. RS175 | 0.81 | PFR28_00181 | | Intermembrane phospholipid transport system binding protein MlaD | 0.78 | PFR28_00632 | | putative efflux pump periplasmic linker TtgA | low | > 88 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.78 | Psyr_4139 | | Mce4/Rv3499c/MTV023.06c protein | 0.79 | Psyr_4007 | | Secretion protein HlyD | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.78 | Psyr_4139 | | Mce4/Rv3499c/MTV023.06c protein | 0.79 | Psyr_4007 | | Secretion protein HlyD | 0.35 | 43 |
| Pseudomonas fluorescens FW300-N2E2 | 0.78 | Pf6N2E2_3258 | | Uncharacterized ABC transporter, periplasmic component YrbD | 0.79 | Pf6N2E2_2823 | | Multidrug efflux RND membrane fusion protein MexC | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.78 | AO356_06995 | | outer membrane lipid asymmetry maintenance protein MlaD | 0.79 | AO356_04875 | | antibiotic transporter | 0.41 | 16 |
| Pseudomonas sp. S08-1 | 0.77 | OH686_08500 | | outer membrane lipid asymmetry maintenance protein MlaD | 0.67 | OH686_16045 | | Multidrug efflux system, membrane fusion component | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.66 | Psest_3305 | | ABC-type transport system involved in resistance to organic solvents, periplasmic component | 0.63 | Psest_0309 | | RND family efflux transporter, MFP subunit | 0.25 | 47 |
| Marinobacter adhaerens HP15 | 0.50 | HP15_2434 | | mammalian cell entry related domain protein | 0.20 | HP15_932 | | efflux transporter, RND family, MFP subunit | low | > 73 |
| Cupriavidus basilensis FW507-4G11 | 0.47 | RR42_RS18960 | | ABC transporter substrate-binding protein | 0.47 | RR42_RS32415 | | hemolysin D | low | > 128 |
| Serratia liquefaciens MT49 | 0.46 | IAI46_22420 | | outer membrane lipid asymmetry maintenance protein MlaD | 0.49 | IAI46_05190 | | multidrug efflux RND transporter periplasmic adaptor subunit SdeX | low | > 86 |
| Enterobacter sp. TBS_079 | 0.45 | MPMX20_04099 | | Intermembrane phospholipid transport system binding protein MlaD | 0.50 | MPMX20_01065 | | Multidrug efflux pump subunit AcrA | low | > 85 |
| Ralstonia solanacearum IBSBF1503 | 0.45 | RALBFv3_RS06890 | | outer membrane lipid asymmetry maintenance protein MlaD | 0.47 | RALBFv3_RS19790 | | efflux RND transporter periplasmic adaptor subunit | 0.53 | 27 |
| Ralstonia solanacearum UW163 | 0.45 | UW163_RS06725 | | outer membrane lipid asymmetry maintenance protein MlaD | 0.47 | UW163_RS19385 | | efflux RND transporter periplasmic adaptor subunit | — | — |
| Ralstonia solanacearum GMI1000 | 0.45 | RS_RS14835 | | outer membrane lipid asymmetry maintenance protein MlaD | 0.46 | RS_RS21035 | | efflux RND transporter periplasmic adaptor subunit | low | > 80 |
| Pectobacterium carotovorum WPP14 | 0.45 | HER17_RS20015 | | outer membrane lipid asymmetry maintenance protein MlaD | 0.48 | HER17_RS15735 | | efflux RND transporter periplasmic adaptor subunit | low | > 75 |
| Escherichia coli Nissle 1917 | 0.45 | ECOLIN_RS18380 | | outer membrane lipid asymmetry maintenance protein MlaD | 0.50 | ECOLIN_RS02755 | | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | — | — |
| Ralstonia solanacearum PSI07 | 0.45 | RPSI07_RS10345 | | outer membrane lipid asymmetry maintenance protein MlaD | 0.46 | RPSI07_RS03395 | | efflux RND transporter periplasmic adaptor subunit | low | > 81 |
| Escherichia coli ECRC99 | 0.44 | KEDOAH_10165 | mlaD | outer membrane lipid asymmetry maintenance protein MlaD | 0.51 | KEDOAH_19765 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | — | — |
| Escherichia coli BW25113 | 0.44 | b3193 | yrbD | predicted ABC-type organic solvent transporter (NCBI) | 0.51 | b0463 | acrA | multidrug efflux system (NCBI) | 0.34 | 26 |
| Escherichia coli ECRC98 | 0.44 | JDDGAC_21610 | mlaD | outer membrane lipid asymmetry maintenance protein MlaD | 0.51 | JDDGAC_11850 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | — | — |
| Escherichia coli BL21 | 0.44 | ECD_03058 | | OM lipid asymmetry maintenance protein; membrane-anchored ABC family periplasmic binding protein | 0.51 | ECD_00414 | | multidrug efflux system | low | > 60 |
| Escherichia coli ECOR27 | 0.44 | NOLOHH_09785 | mlaD | outer membrane lipid asymmetry maintenance protein MlaD | 0.51 | NOLOHH_01135 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | low | > 57 |
| Escherichia coli ECRC101 | 0.44 | OKFHMN_17985 | mlaD | outer membrane lipid asymmetry maintenance protein MlaD | 0.51 | OKFHMN_08200 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | — | — |
| Escherichia coli ECRC102 | 0.44 | NIAGMN_15745 | mlaD | outer membrane lipid asymmetry maintenance protein MlaD | 0.51 | NIAGMN_06255 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | — | — |
| Escherichia coli ECRC62 | 0.44 | BNILDI_01750 | mlaD | outer membrane lipid asymmetry maintenance protein MlaD | 0.51 | BNILDI_22550 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | — | — |
| Escherichia coli ECOR38 | 0.44 | HEPCGN_16860 | mlaD | outer membrane lipid asymmetry maintenance protein MlaD | 0.50 | HEPCGN_06815 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | low | > 85 |
| Escherichia fergusonii Becca | 0.44 | EFB2_00630 | | Intermembrane phospholipid transport system binding protein MlaD | 0.50 | EFB2_03595 | | Multidrug efflux pump subunit AcrA | low | > 86 |
| Escherichia coli ECRC101 | 0.44 | MCAODC_08505 | mlaD | outer membrane lipid asymmetry maintenance protein MlaD | 0.51 | MCAODC_27425 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.44 | OHPLBJKB_00507 | | putative phospholipid ABC transporter-binding protein MlaD | 0.51 | OHPLBJKB_03211 | | Multidrug efflux pump subunit AcrA | 0.55 | 15 |
| Enterobacter asburiae PDN3 | 0.44 | EX28DRAFT_3247 | | mce related protein | 0.49 | EX28DRAFT_2495 | | RND family efflux transporter, MFP subunit | low | > 76 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.44 | H281DRAFT_05643 | | phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein | 0.46 | H281DRAFT_04171 | | membrane fusion protein, multidrug efflux system | 0.44 | 35 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.44 | GFF2937 | | Uncharacterized ABC transporter, periplasmic component YrbD | 0.49 | GFF4380 | | Membrane fusion protein of RND family multidrug efflux pump | low | > 78 |
| Klebsiella michiganensis M5al | 0.43 | BWI76_RS25220 | | outer membrane lipid asymmetry maintenance protein MlaD | 0.49 | BWI76_RS06780 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | 0.47 | 15 |
| Shewanella amazonensis SB2B | 0.42 | Sama_3079 | | mce-related protein (RefSeq) | 0.42 | Sama_3553 | | multidrug resistance protein AcrA/AcrE family (RefSeq) | low | > 62 |
| Pantoea sp. MT58 | 0.41 | IAI47_17135 | | outer membrane lipid asymmetry maintenance protein MlaD | 0.49 | IAI47_14510 | | efflux RND transporter periplasmic adaptor subunit | 0.31 | 58 |
| Rahnella sp. WP5 | 0.41 | EX31_RS12445 | | outer membrane lipid asymmetry maintenance protein MlaD | 0.50 | EX31_RS13320 | | efflux RND transporter periplasmic adaptor subunit | low | > 89 |
| Shewanella loihica PV-4 | 0.40 | Shew_3302 | | hypothetical protein (RefSeq) | 0.41 | Shew_0031 | | RND family efflux transporter MFP subunit (RefSeq) | low | > 60 |
| Erwinia tracheiphila SCR3 | 0.39 | LU632_RS21235 | mlaD | outer membrane lipid asymmetry maintenance protein MlaD | 0.49 | LU632_RS18180 | | efflux RND transporter periplasmic adaptor subunit | — | — |
| Alteromonas macleodii MIT1002 | 0.39 | MIT1002_00836 | | putative phospholipid ABC transporter-binding protein MlaD | 0.34 | MIT1002_00134 | | Acriflavine resistance protein A precursor | low | > 70 |
| Shewanella oneidensis MR-1 | 0.38 | SO3952 | | mce-related protein (NCBI ptt file) | 0.42 | SO4693 | | multidrug resistance protein, AcrA/AcrE family (NCBI ptt file) | low | > 76 |
| Variovorax sp. SCN45 | 0.35 | GFF5336 | | Phospholipid ABC transporter substrate-binding protein MlaD | 0.41 | GFF2442 | | RND efflux system, membrane fusion protein | low | > 127 |
| Acinetobacter radioresistens SK82 | 0.35 | MPMX26_02739 | | Intermembrane phospholipid transport system binding protein MlaD | 0.39 | MPMX26_00690 | | Multidrug efflux pump subunit AcrA | low | > 36 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.28 | DVU1244 | | conserved hypothetical protein (TIGR) | 0.46 | DVU2817 | acrA | multidrug resistance protein (TIGR) | low | > 55 |
| Dinoroseobacter shibae DFL-12 | 0.24 | Dshi_1391 | | Mammalian cell entry related domain protein (RefSeq) | 0.09 | Dshi_1163 | | efflux transporter, RND family, MFP subunit (RefSeq) | — | — |
| Caulobacter crescentus NA1000 | 0.22 | CCNA_03808 | | organic solvent resistance transport system Ttg2C protein | 0.38 | CCNA_00851 | | periplasmic multidrug efflux lipoprotein precursor | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.22 | CCNA_03808 | | organic solvent resistance transport system Ttg2C protein | 0.38 | CCNA_00851 | | periplasmic multidrug efflux lipoprotein precursor | low | > 67 |
Not shown: 11 genomes with orthologs for PS417_04385 only; 25 genomes with orthologs for PS417_06775 only