Conservation of cofitness between PS417_02385 and PS417_06770 in Pseudomonas simiae WCS417

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_02385 esterase 1.0 PS417_06770 multidrug transporter 0.27 8
Pseudomonas fluorescens SBW25-INTG 0.97 PFLU_RS02460 alpha/beta fold hydrolase 0.97 PFLU_RS06805 efflux RND transporter permease subunit low > 109
Pseudomonas fluorescens SBW25 0.97 PFLU_RS02460 alpha/beta fold hydrolase 0.97 PFLU_RS06805 efflux RND transporter permease subunit low > 109
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_1441 Putative esterase, FIGfam005057 0.83 Pf1N1B4_3246 RND efflux system, inner membrane transporter CmeB 0.48 56
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_08770 esterase 0.84 AO356_04880 multidrug transporter low > 104
Pseudomonas fluorescens FW300-N2E3 0.88 AO353_13040 esterase 0.84 AO353_17295 multidrug transporter 0.53 10
Pseudomonas fluorescens FW300-N2E2 0.88 Pf6N2E2_3637 yqiA-like hydrolase, affects the cell envelope (from data) 0.85 Pf6N2E2_2824 RND efflux system, inner membrane transporter CmeB low > 103
Pseudomonas sp. RS175 0.87 PFR28_05099 hypothetical protein 0.83 PFR28_00631 putative efflux pump membrane transporter TtgB low > 88
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_179 Putative esterase, FIGfam005057 0.84 PfGW456L13_4581 RND efflux system, inner membrane transporter CmeB 0.39 64
Pseudomonas putida KT2440 0.80 PP_4916 putative esterase 0.82 PP_1385 Probable efflux pump membrane transporter TtgB 0.14 60
Pseudomonas stutzeri RCH2 0.75 Psest_0482 yqiA-like hydrolase, affects the cell envelope (from data) 0.75 Psest_0310 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_0550 Protein of unknown function UPF0227 0.86 Psyr_4008 Hydrophobe/amphiphile efflux-1 HAE1
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_0550 Protein of unknown function UPF0227 0.86 Psyr_4008 Hydrophobe/amphiphile efflux-1 HAE1 low > 86
Pseudomonas sp. S08-1 0.68 OH686_15820 Esterase YqiA 0.78 OH686_16050 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) low > 80
Shewanella oneidensis MR-1 0.37 SO3900 yqiA-like hydrolase, affects the cell envelope (from data) 0.63 SO4692 AcrB/AcrD/AcrF family protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.36 Shewana3_0729 hypothetical protein (RefSeq) 0.64 Shewana3_4045 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.36 Sama_3044 yqiA-like hydrolase, affects the cell envelope (from data) 0.63 Sama_3554 AcrB/AcrD/AcrF family protein (RefSeq) low > 62
Ralstonia solanacearum GMI1000 0.36 RS_RS13910 esterase 0.61 RS_RS21030 multidrug efflux RND transporter permease subunit 0.29 52
Shewanella loihica PV-4 0.36 Shew_0548 yqiA-like hydrolase, affects the cell envelope (from data) 0.62 Shew_0032 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) low > 60
Ralstonia solanacearum IBSBF1503 0.36 RALBFv3_RS05965 esterase 0.62 RALBFv3_RS19795 multidrug efflux RND transporter permease subunit low > 76
Ralstonia solanacearum UW163 0.36 UW163_RS07660 esterase 0.62 UW163_RS19380 multidrug efflux RND transporter permease subunit
Ralstonia solanacearum PSI07 0.36 RPSI07_RS11280 esterase 0.62 RPSI07_RS03390 multidrug efflux RND transporter permease subunit low > 81
Dickeya dianthicola 67-19 0.34 HGI48_RS01655 esterase YqiA 0.63 HGI48_RS05790 multidrug efflux RND transporter permease subunit low > 71
Dickeya dianthicola ME23 0.34 DZA65_RS01730 esterase YqiA 0.63 DZA65_RS06115 multidrug efflux RND transporter permease subunit low > 75
Dickeya dadantii 3937 0.34 DDA3937_RS01760 esterase YqiA 0.64 DDA3937_RS05735 multidrug efflux RND transporter permease subunit low > 74
Pectobacterium carotovorum WPP14 0.33 HER17_RS19805 esterase YqiA 0.64 HER17_RS15740 multidrug efflux RND transporter permease subunit low > 75
Erwinia tracheiphila SCR3 0.32 LU632_RS20615 yqiA esterase YqiA 0.66 LU632_RS18185 efflux RND transporter permease subunit
Pantoea sp. MT58 0.31 IAI47_03155 esterase YqiA 0.67 IAI47_14515 multidrug efflux RND transporter permease subunit low > 76
Serratia liquefaciens MT49 0.31 IAI46_21925 esterase YqiA 0.64 IAI46_16735 efflux RND transporter permease subunit low > 86
Alteromonas macleodii MIT1002 0.31 MIT1002_00674 esterase YqiA 0.56 MIT1002_00135 Multidrug-efflux transporter MexB low > 70
Klebsiella michiganensis M5al 0.31 BWI76_RS24380 esterase YqiA 0.67 BWI76_RS06775 multidrug efflux RND transporter permease subunit 0.25 8
Enterobacter sp. TBS_079 0.31 MPMX20_03878 hypothetical protein 0.66 MPMX20_01064 Multidrug efflux pump subunit AcrB low > 85
Enterobacter asburiae PDN3 0.30 EX28DRAFT_3069 Predicted esterase 0.66 EX28DRAFT_2496 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.30 GFF3145 Putative esterase, FIGfam005057 0.67 GFF4379 RND efflux system, inner membrane transporter CmeB low > 78
Escherichia coli ECRC62 0.30 BNILDI_00885 cpdA 3',5'-cyclic-AMP phosphodiesterase 0.66 BNILDI_22555 acrB efflux RND transporter permease AcrB
Escherichia coli ECRC99 0.30 KEDOAH_09320 cpdA 3',5'-cyclic-AMP phosphodiesterase 0.66 KEDOAH_19760 acrB efflux RND transporter permease AcrB
Escherichia coli ECRC101 0.30 MCAODC_09340 cpdA 3',5'-cyclic-AMP phosphodiesterase 0.66 MCAODC_27430 acrB efflux RND transporter permease AcrB
Escherichia coli ECOR38 0.30 HEPCGN_17700 cpdA 3',5'-cyclic-AMP phosphodiesterase 0.66 HEPCGN_06820 acrB efflux RND transporter permease AcrB low > 85
Escherichia fergusonii Becca 0.30 EFB2_00777 hypothetical protein 0.66 EFB2_03596 Multidrug efflux pump subunit AcrB low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.30 OHPLBJKB_00672 hypothetical protein 0.66 OHPLBJKB_03212 Multidrug efflux pump subunit AcrB low > 73
Escherichia coli ECRC101 0.30 OKFHMN_18825 cpdA 3',5'-cyclic-AMP phosphodiesterase 0.66 OKFHMN_08205 acrB efflux RND transporter permease AcrB
Escherichia coli ECOR27 0.30 NOLOHH_10630 cpdA 3',5'-cyclic-AMP phosphodiesterase 0.66 NOLOHH_01140 acrB efflux RND transporter permease AcrB low > 57
Escherichia coli BL21 0.30 ECD_02903 acyl CoA esterase 0.66 ECD_00413 multidrug efflux system protein low > 60
Escherichia coli ECRC102 0.30 NIAGMN_16590 cpdA 3',5'-cyclic-AMP phosphodiesterase 0.66 NIAGMN_06260 acrB efflux RND transporter permease AcrB
Escherichia coli BW25113 0.30 b3031 yqiA predicted esterase (NCBI) 0.66 b0462 acrB multidrug efflux system protein (NCBI) 0.24 69
Escherichia coli Nissle 1917 0.30 ECOLIN_RS17495 esterase YqiA 0.66 ECOLIN_RS02750 efflux RND transporter permease AcrB low > 52
Escherichia coli ECRC98 0.30 JDDGAC_22460 cpdA 3',5'-cyclic-AMP phosphodiesterase 0.57 JDDGAC_25915 acrD multidrug efflux RND transporter permease AcrD
Herbaspirillum seropedicae SmR1 0.29 HSERO_RS01970 esterase 0.60 HSERO_RS06815 multidrug transporter low > 78
Acinetobacter radioresistens SK82 0.29 MPMX26_02947 hypothetical protein 0.57 MPMX26_00689 Multidrug resistance protein MexB low > 36
Paraburkholderia graminis OAS925 0.28 ABIE53_003562 putative esterase YcpF (UPF0227 family) 0.62 ABIE53_003408 multidrug efflux pump low > 113
Burkholderia phytofirmans PsJN 0.28 BPHYT_RS16985 esterase 0.63 BPHYT_RS16170 multidrug efflux RND transporter permease subunit
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS27140 YqiA/YcfP family alpha/beta fold hydrolase 0.64 QEN71_RS02525 efflux RND transporter permease subunit 0.67 34
Paraburkholderia bryophila 376MFSha3.1 0.27 H281DRAFT_06289 hypothetical protein 0.63 H281DRAFT_04170 multidrug efflux pump low > 103
Rahnella sp. WP5 0.26 EX31_RS08080 esterase YqiA 0.67 EX31_RS22470 multidrug efflux RND transporter permease subunit low > 89
Cupriavidus basilensis FW507-4G11 0.24 RR42_RS17670 esterase 0.62 RR42_RS32420 multidrug efflux RND transporter permease subunit low > 128

Not shown: 7 genomes with orthologs for PS417_02385 only; 21 genomes with orthologs for PS417_06770 only