Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pseudomonas simiae WCS417 | 1.0 | PS417_02385 | | esterase | 1.0 | PS417_06770 | | multidrug transporter | 0.27 | 8 |
Pseudomonas fluorescens SBW25-INTG | 0.97 | PFLU_RS02460 | | alpha/beta fold hydrolase | 0.97 | PFLU_RS06805 | | efflux RND transporter permease subunit | low | > 109 |
Pseudomonas fluorescens SBW25 | 0.97 | PFLU_RS02460 | | alpha/beta fold hydrolase | 0.97 | PFLU_RS06805 | | efflux RND transporter permease subunit | low | > 109 |
Pseudomonas fluorescens FW300-N1B4 | 0.89 | Pf1N1B4_1441 | | Putative esterase, FIGfam005057 | 0.83 | Pf1N1B4_3246 | | RND efflux system, inner membrane transporter CmeB | 0.48 | 56 |
Pseudomonas fluorescens FW300-N2C3 | 0.88 | AO356_08770 | | esterase | 0.84 | AO356_04880 | | multidrug transporter | low | > 104 |
Pseudomonas fluorescens FW300-N2E3 | 0.88 | AO353_13040 | | esterase | 0.84 | AO353_17295 | | multidrug transporter | 0.53 | 10 |
Pseudomonas fluorescens FW300-N2E2 | 0.88 | Pf6N2E2_3637 | | yqiA-like hydrolase, affects the cell envelope (from data) | 0.85 | Pf6N2E2_2824 | | RND efflux system, inner membrane transporter CmeB | low | > 103 |
Pseudomonas sp. RS175 | 0.87 | PFR28_05099 | | hypothetical protein | 0.83 | PFR28_00631 | | putative efflux pump membrane transporter TtgB | low | > 88 |
Pseudomonas fluorescens GW456-L13 | 0.87 | PfGW456L13_179 | | Putative esterase, FIGfam005057 | 0.84 | PfGW456L13_4581 | | RND efflux system, inner membrane transporter CmeB | 0.39 | 64 |
Pseudomonas putida KT2440 | 0.80 | PP_4916 | | putative esterase | 0.82 | PP_1385 | | Probable efflux pump membrane transporter TtgB | 0.14 | 60 |
Pseudomonas stutzeri RCH2 | 0.75 | Psest_0482 | | yqiA-like hydrolase, affects the cell envelope (from data) | 0.75 | Psest_0310 | | The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family | low | > 67 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.73 | Psyr_0550 | | Protein of unknown function UPF0227 | 0.86 | Psyr_4008 | | Hydrophobe/amphiphile efflux-1 HAE1 | — | — |
Pseudomonas syringae pv. syringae B728a | 0.73 | Psyr_0550 | | Protein of unknown function UPF0227 | 0.86 | Psyr_4008 | | Hydrophobe/amphiphile efflux-1 HAE1 | low | > 86 |
Pseudomonas sp. S08-1 | 0.68 | OH686_15820 | | Esterase YqiA | 0.78 | OH686_16050 | | Multidrug efflux system, inner membrane proton/drug antiporter (RND type) | low | > 80 |
Shewanella oneidensis MR-1 | 0.37 | SO3900 | | yqiA-like hydrolase, affects the cell envelope (from data) | 0.63 | SO4692 | | AcrB/AcrD/AcrF family protein (NCBI ptt file) | low | > 76 |
Shewanella sp. ANA-3 | 0.36 | Shewana3_0729 | | hypothetical protein (RefSeq) | 0.64 | Shewana3_4045 | | hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) | low | > 73 |
Shewanella amazonensis SB2B | 0.36 | Sama_3044 | | yqiA-like hydrolase, affects the cell envelope (from data) | 0.63 | Sama_3554 | | AcrB/AcrD/AcrF family protein (RefSeq) | low | > 62 |
Ralstonia solanacearum GMI1000 | 0.36 | RS_RS13910 | | esterase | 0.61 | RS_RS21030 | | multidrug efflux RND transporter permease subunit | 0.29 | 52 |
Shewanella loihica PV-4 | 0.36 | Shew_0548 | | yqiA-like hydrolase, affects the cell envelope (from data) | 0.62 | Shew_0032 | | hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) | low | > 60 |
Ralstonia solanacearum IBSBF1503 | 0.36 | RALBFv3_RS05965 | | esterase | 0.62 | RALBFv3_RS19795 | | multidrug efflux RND transporter permease subunit | low | > 76 |
Ralstonia solanacearum UW163 | 0.36 | UW163_RS07660 | | esterase | 0.62 | UW163_RS19380 | | multidrug efflux RND transporter permease subunit | — | — |
Ralstonia solanacearum PSI07 | 0.36 | RPSI07_RS11280 | | esterase | 0.62 | RPSI07_RS03390 | | multidrug efflux RND transporter permease subunit | low | > 81 |
Dickeya dianthicola 67-19 | 0.34 | HGI48_RS01655 | | esterase YqiA | 0.63 | HGI48_RS05790 | | multidrug efflux RND transporter permease subunit | low | > 71 |
Dickeya dianthicola ME23 | 0.34 | DZA65_RS01730 | | esterase YqiA | 0.63 | DZA65_RS06115 | | multidrug efflux RND transporter permease subunit | low | > 75 |
Dickeya dadantii 3937 | 0.34 | DDA3937_RS01760 | | esterase YqiA | 0.64 | DDA3937_RS05735 | | multidrug efflux RND transporter permease subunit | low | > 74 |
Pectobacterium carotovorum WPP14 | 0.33 | HER17_RS19805 | | esterase YqiA | 0.64 | HER17_RS15740 | | multidrug efflux RND transporter permease subunit | low | > 75 |
Erwinia tracheiphila SCR3 | 0.32 | LU632_RS20615 | yqiA | esterase YqiA | 0.66 | LU632_RS18185 | | efflux RND transporter permease subunit | — | — |
Pantoea sp. MT58 | 0.31 | IAI47_03155 | | esterase YqiA | 0.67 | IAI47_14515 | | multidrug efflux RND transporter permease subunit | low | > 76 |
Serratia liquefaciens MT49 | 0.31 | IAI46_21925 | | esterase YqiA | 0.64 | IAI46_16735 | | efflux RND transporter permease subunit | low | > 86 |
Alteromonas macleodii MIT1002 | 0.31 | MIT1002_00674 | | esterase YqiA | 0.56 | MIT1002_00135 | | Multidrug-efflux transporter MexB | low | > 70 |
Klebsiella michiganensis M5al | 0.31 | BWI76_RS24380 | | esterase YqiA | 0.67 | BWI76_RS06775 | | multidrug efflux RND transporter permease subunit | 0.25 | 8 |
Enterobacter sp. TBS_079 | 0.31 | MPMX20_03878 | | hypothetical protein | 0.66 | MPMX20_01064 | | Multidrug efflux pump subunit AcrB | low | > 85 |
Enterobacter asburiae PDN3 | 0.30 | EX28DRAFT_3069 | | Predicted esterase | 0.66 | EX28DRAFT_2496 | | The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family | low | > 76 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.30 | GFF3145 | | Putative esterase, FIGfam005057 | 0.67 | GFF4379 | | RND efflux system, inner membrane transporter CmeB | low | > 78 |
Escherichia coli ECRC62 | 0.30 | BNILDI_00885 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | 0.66 | BNILDI_22555 | acrB | efflux RND transporter permease AcrB | — | — |
Escherichia coli ECRC99 | 0.30 | KEDOAH_09320 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | 0.66 | KEDOAH_19760 | acrB | efflux RND transporter permease AcrB | — | — |
Escherichia coli ECRC101 | 0.30 | MCAODC_09340 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | 0.66 | MCAODC_27430 | acrB | efflux RND transporter permease AcrB | — | — |
Escherichia coli ECOR38 | 0.30 | HEPCGN_17700 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | 0.66 | HEPCGN_06820 | acrB | efflux RND transporter permease AcrB | low | > 85 |
Escherichia fergusonii Becca | 0.30 | EFB2_00777 | | hypothetical protein | 0.66 | EFB2_03596 | | Multidrug efflux pump subunit AcrB | low | > 86 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.30 | OHPLBJKB_00672 | | hypothetical protein | 0.66 | OHPLBJKB_03212 | | Multidrug efflux pump subunit AcrB | low | > 73 |
Escherichia coli ECRC101 | 0.30 | OKFHMN_18825 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | 0.66 | OKFHMN_08205 | acrB | efflux RND transporter permease AcrB | — | — |
Escherichia coli ECOR27 | 0.30 | NOLOHH_10630 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | 0.66 | NOLOHH_01140 | acrB | efflux RND transporter permease AcrB | low | > 57 |
Escherichia coli BL21 | 0.30 | ECD_02903 | | acyl CoA esterase | 0.66 | ECD_00413 | | multidrug efflux system protein | low | > 60 |
Escherichia coli ECRC102 | 0.30 | NIAGMN_16590 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | 0.66 | NIAGMN_06260 | acrB | efflux RND transporter permease AcrB | — | — |
Escherichia coli BW25113 | 0.30 | b3031 | yqiA | predicted esterase (NCBI) | 0.66 | b0462 | acrB | multidrug efflux system protein (NCBI) | 0.24 | 69 |
Escherichia coli Nissle 1917 | 0.30 | ECOLIN_RS17495 | | esterase YqiA | 0.66 | ECOLIN_RS02750 | | efflux RND transporter permease AcrB | low | > 52 |
Escherichia coli ECRC98 | 0.30 | JDDGAC_22460 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | 0.57 | JDDGAC_25915 | acrD | multidrug efflux RND transporter permease AcrD | — | — |
Herbaspirillum seropedicae SmR1 | 0.29 | HSERO_RS01970 | | esterase | 0.60 | HSERO_RS06815 | | multidrug transporter | low | > 78 |
Acinetobacter radioresistens SK82 | 0.29 | MPMX26_02947 | | hypothetical protein | 0.57 | MPMX26_00689 | | Multidrug resistance protein MexB | low | > 36 |
Paraburkholderia graminis OAS925 | 0.28 | ABIE53_003562 | | putative esterase YcpF (UPF0227 family) | 0.62 | ABIE53_003408 | | multidrug efflux pump | low | > 113 |
Burkholderia phytofirmans PsJN | 0.28 | BPHYT_RS16985 | | esterase | 0.63 | BPHYT_RS16170 | | multidrug efflux RND transporter permease subunit | — | — |
Paraburkholderia sabiae LMG 24235 | 0.28 | QEN71_RS27140 | | YqiA/YcfP family alpha/beta fold hydrolase | 0.64 | QEN71_RS02525 | | efflux RND transporter permease subunit | 0.67 | 34 |
Paraburkholderia bryophila 376MFSha3.1 | 0.27 | H281DRAFT_06289 | | hypothetical protein | 0.63 | H281DRAFT_04170 | | multidrug efflux pump | low | > 103 |
Rahnella sp. WP5 | 0.26 | EX31_RS08080 | | esterase YqiA | 0.67 | EX31_RS22470 | | multidrug efflux RND transporter permease subunit | low | > 89 |
Cupriavidus basilensis FW507-4G11 | 0.24 | RR42_RS17670 | | esterase | 0.62 | RR42_RS32420 | | multidrug efflux RND transporter permease subunit | low | > 128 |
Not shown: 7 genomes with orthologs for PS417_02385 only; 21 genomes with orthologs for PS417_06770 only