Conservation of cofitness between PS417_20155 and PS417_06135 in Pseudomonas simiae WCS417

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_20155 23S rRNA methyltransferase 1.0 PS417_06135 glycerol-3-phosphate acyltransferase 0.31 1
Pseudomonas fluorescens SBW25 0.94 PFLU_RS22100 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.97 PFLU_RS06200 glycerol-3-phosphate 1-O-acyltransferase PlsB low > 109
Pseudomonas fluorescens SBW25-INTG 0.94 PFLU_RS22100 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.97 PFLU_RS06200 glycerol-3-phosphate 1-O-acyltransferase PlsB low > 109
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_3507 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 0.92 Pf1N1B4_3067 Glycerol-3-phosphate acyltransferase (EC 2.3.1.15) low > 87
Pseudomonas fluorescens FW300-N2E2 0.85 Pf6N2E2_5722 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 0.92 Pf6N2E2_3087 Glycerol-3-phosphate acyltransferase (EC 2.3.1.15) low > 103
Pseudomonas fluorescens FW300-N2C3 0.84 AO356_19055 23S rRNA methyltransferase 0.92 AO356_06110 glycerol-3-phosphate O-acyltransferase low > 104
Pseudomonas sp. RS175 0.84 PFR28_03224 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.91 PFR28_00382 Glycerol-3-phosphate acyltransferase low > 88
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_2033 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 0.91 PfGW456L13_4725 Glycerol-3-phosphate acyltransferase (EC 2.3.1.15) low > 87
Pseudomonas fluorescens FW300-N2E3 0.82 AO353_02715 23S rRNA methyltransferase 0.92 AO353_16390 glycerol-3-phosphate O-acyltransferase low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.76 Psyr_3696 23S rRNA m(5)U-1939 methyltransferase 0.83 Psyr_1328 glycerol-3-phosphate acyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.76 Psyr_3696 23S rRNA m(5)U-1939 methyltransferase 0.83 Psyr_1328 glycerol-3-phosphate acyltransferase low > 86
Pseudomonas sp. S08-1 0.73 OH686_18955 23S rRNA (uracil-5-)-methyltransferase RumA 0.80 OH686_06605 glycerol-3-phosphate O-acyltransferase low > 80
Pseudomonas putida KT2440 0.69 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.84 PP_1520 glycerol-3-phosphate acyltransferase low > 96
Pseudomonas stutzeri RCH2 0.67 Psest_1639 23S rRNA (uracil-5-)-methyltransferase RumA 0.79 Psest_1608 glycerol-3-phosphate O-acyltransferase low > 67
Vibrio cholerae E7946 ATCC 55056 0.41 CSW01_12410 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.34 CSW01_00500 glycerol-3-phosphate 1-O-acyltransferase low > 62
Marinobacter adhaerens HP15 0.40 HP15_790 23S rRNA 5-methyluridine methyltransferase 0.48 HP15_802 glycerol-3-phosphate acyltransferase low > 73
Acinetobacter radioresistens SK82 0.40 MPMX26_00538 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.36 MPMX26_02730 Glycerol-3-phosphate acyltransferase — —
Kangiella aquimarina DSM 16071 0.39 B158DRAFT_2275 23S rRNA (uracil-5-)-methyltransferase RumA 0.35 B158DRAFT_0273 glycerol-3-phosphate acyltransferase (EC 2.3.1.15) — —
Shewanella loihica PV-4 0.37 Shew_1201 rumA 23S rRNA 5-methyluridine methyltransferase (RefSeq) 0.34 Shew_3530 glycerol-3-phosphate acyltransferase (RefSeq) — —
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS07120 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.39 ABZR86_RS16665 glycerol-3-phosphate 1-O-acyltransferase PlsB — —
Xanthomonas campestris pv. campestris strain 8004 0.37 Xcc-8004.3669.1 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) 0.36 Xcc-8004.5250.1 Glycerol-3-phosphate acyltransferase (EC 2.3.1.15) — —
Rhodanobacter denitrificans MT42 0.36 LRK55_RS16715 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.38 LRK55_RS10415 glycerol-3-phosphate 1-O-acyltransferase PlsB — —
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS17000 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.38 LRK54_RS10775 glycerol-3-phosphate 1-O-acyltransferase PlsB — —
Serratia liquefaciens MT49 0.36 IAI46_03595 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.32 IAI46_23015 glycerol-3-phosphate 1-O-acyltransferase PlsB — —
Pantoea sp. MT58 0.36 IAI47_04115 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.33 IAI47_17900 glycerol-3-phosphate 1-O-acyltransferase PlsB low > 76
Shewanella amazonensis SB2B 0.36 Sama_1032 rumA 23S rRNA 5-methyluridine methyltransferase (RefSeq) 0.32 Sama_3480 glycerol-3-phosphate acyltransferase (RefSeq) — —
Escherichia coli ECOR38 0.36 HEPCGN_19495 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.32 HEPCGN_11595 plsB glycerol-3-phosphate 1-O-acyltransferase PlsB low > 87
Shewanella oneidensis MR-1 0.36 SO3456 RNA methyltransferase, TrmA family (NCBI ptt file) 0.33 SO4602 plsB glycerol-3-phosphate acyltransferase (NCBI ptt file) — —
Rhodanobacter sp. FW510-T8 0.35 OKGIIK_07840 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.38 OKGIIK_13110 plsB glycerol-3-phosphate 1-O-acyltransferase PlsB — —
Escherichia coli ECOR27 0.35 NOLOHH_12120 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.32 NOLOHH_05230 plsB glycerol-3-phosphate 1-O-acyltransferase PlsB low > 75
Erwinia tracheiphila SCR3 0.35 LU632_RS06345 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.32 LU632_RS22325 plsB glycerol-3-phosphate 1-O-acyltransferase PlsB — —
Escherichia coli ECRC100 0.35 OKFHMN_20245 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.32 OKFHMN_13075 plsB glycerol-3-phosphate 1-O-acyltransferase PlsB — —
Escherichia coli ECRC99 0.35 KEDOAH_07885 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.32 KEDOAH_15085 plsB glycerol-3-phosphate 1-O-acyltransferase PlsB — —
Escherichia coli ECRC101 0.35 MCAODC_10770 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.32 MCAODC_03575 plsB glycerol-3-phosphate 1-O-acyltransferase PlsB low > 87
Escherichia coli ECRC102 0.35 NIAGMN_18015 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.32 NIAGMN_10825 plsB glycerol-3-phosphate 1-O-acyltransferase PlsB — —
Pectobacterium carotovorum WPP14 0.35 HER17_RS04110 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.31 HER17_RS18805 glycerol-3-phosphate 1-O-acyltransferase PlsB — —
Shewanella sp. ANA-3 0.35 Shewana3_1110 rumA 23S rRNA 5-methyluridine methyltransferase (RefSeq) 0.33 Shewana3_3988 glycerol-3-phosphate acyltransferase (RefSeq) — —
Escherichia coli ECRC98 0.35 JDDGAC_23910 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.32 JDDGAC_16700 plsB glycerol-3-phosphate 1-O-acyltransferase PlsB — —
Escherichia coli BW25113 0.35 b2785 rumA 23S rRNA (uracil-5-)-methyltransferase (NCBI) 0.32 b4041 plsB glycerol-3-phosphate acyltransferase (VIMSS) low > 76
Escherichia coli Nissle 1917 0.35 ECOLIN_RS15520 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.32 ECOLIN_RS23325 glycerol-3-phosphate 1-O-acyltransferase PlsB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_00946 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.32 OHPLBJKB_04002 Glycerol-3-phosphate acyltransferase — —
Escherichia coli ECRC62 0.35 BNILDI_10625 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.32 BNILDI_06290 plsB glycerol-3-phosphate 1-O-acyltransferase PlsB — —
Lysobacter sp. OAE881 0.35 ABIE51_RS13830 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.37 ABIE51_RS00430 glycerol-3-phosphate 1-O-acyltransferase PlsB — —
Dickeya dadantii 3937 0.35 DDA3937_RS17020 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.32 DDA3937_RS02750 glycerol-3-phosphate 1-O-acyltransferase PlsB — —
Dickeya dianthicola ME23 0.35 DZA65_RS18150 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.32 DZA65_RS02880 glycerol-3-phosphate 1-O-acyltransferase PlsB — —
Escherichia fergusonii Becca 0.35 EFB2_01132 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.32 EFB2_04562 Glycerol-3-phosphate acyltransferase low > 86
Escherichia coli BL21 0.35 ECD_02630 23S rRNA m(5)U1939 methyltransferase, SAM-dependent 0.32 ECD_03913 glycerol-3-phosphate O-acyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.35 GFF4838 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) 0.32 GFF1410 Glycerol-3-phosphate acyltransferase (EC 2.3.1.15) — —
Dickeya dianthicola 67-19 0.34 HGI48_RS17075 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.33 HGI48_RS02725 glycerol-3-phosphate 1-O-acyltransferase PlsB — —
Enterobacter asburiae PDN3 0.34 EX28DRAFT_2865 23S rRNA (uracil-5-)-methyltransferase RumA 0.32 EX28DRAFT_4271 glycerol-3-phosphate acyltransferase (EC 2.3.1.15) low > 76
Enterobacter sp. TBS_079 0.34 MPMX20_03654 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.32 MPMX20_00257 Glycerol-3-phosphate acyltransferase — —
Rahnella sp. WP5 0.34 EX31_RS07960 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.32 EX31_RS11835 glycerol-3-phosphate 1-O-acyltransferase PlsB — —
Klebsiella michiganensis M5al 0.34 BWI76_RS22810 23S rRNA (uracil(1939)-C(5))-methyltransferase 0.33 BWI76_RS01865 glycerol-3-phosphate 1-O-acyltransferase — —
Alteromonas macleodii MIT1002 0.30 MIT1002_00793 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.32 MIT1002_04039 Glycerol-3-phosphate acyltransferase — —

Not shown: 45 genomes with orthologs for PS417_20155 only; 0 genomes with orthologs for PS417_06135 only