Conservation of cofitness between PS417_07455 and PS417_05570 in Pseudomonas simiae WCS417

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_07455 glutamine amidotransferase 1.0 PS417_05570 DeoR faimly transcriptional regulator 0.20 3
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS07540 class II glutamine amidotransferase 0.99 PFLU_RS05655 DeoR/GlpR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25 0.99 PFLU_RS07540 class II glutamine amidotransferase 0.99 PFLU_RS05655 DeoR/GlpR family transcriptional regulator low > 109
Pseudomonas fluorescens FW300-N1B4 0.95 Pf1N1B4_3359 Glutamine amidotransferase, class-II 0.97 Pf1N1B4_768 Glycerol-3-phosphate regulon repressor, DeoR family
Pseudomonas fluorescens GW456-L13 0.95 PfGW456L13_4482 Glutamine amidotransferase, class-II 0.98 PfGW456L13_1733 Glycerol-3-phosphate regulon repressor, DeoR family low > 87
Pseudomonas sp. RS175 0.94 PFR28_00725 Putative glutamine amidotransferase YafJ 0.96 PFR28_03369 Glycerol-3-phosphate regulon repressor low > 88
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_2711 Glutamine amidotransferase, class-II 0.96 Pf6N2E2_5573 Glycerol-3-phosphate regulon repressor, DeoR family low > 103
Pseudomonas fluorescens FW300-N2C3 0.93 AO356_04350 glutamine amidotransferase 0.96 AO356_18245 DeoR family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E3 0.93 AO353_17960 glutamine amidotransferase 0.94 AO353_04185 DeoR family transcriptional regulator low > 101
Pseudomonas syringae pv. syringae B728a 0.93 Psyr_1576 Glutamine amidotransferase, class-II 0.91 Psyr_3906 regulatory protein, DeoR low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.93 Psyr_1576 Glutamine amidotransferase, class-II 0.91 Psyr_3906 regulatory protein, DeoR low > 86
Pseudomonas putida KT2440 0.86 PP_4581 putative amidotransferase 0.91 PP_1074 DNA-binding transcriptional repressor - GlpR-glycerol-3-phosphate low > 96
Pseudomonas sp. S08-1 0.85 OH686_05255 Putative glutamine amidotransferase YafJ 0.74 OH686_20365 Glycerol-3-phosphate regulon repressor GlpR low > 80
Pseudomonas stutzeri RCH2 0.80 Psest_1849 Predicted glutamine amidotransferase 0.77 Psest_2774 Transcriptional regulators of sugar metabolism
Marinobacter adhaerens HP15 0.67 HP15_3871 glutamine amidotransferase class-II 0.51 HP15_2167 transcriptional repressor for the dissimilation of sn-glycerol 3-phosphate, DeoR family protein low > 73
Azospirillum sp. SherDot2 0.61 MPMX19_00595 Putative glutamine amidotransferase YafJ 0.47 MPMX19_05965 Glycerol-3-phosphate regulon repressor low > 112
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_11360 class II glutamine amidotransferase 0.57 CSW01_18830 DeoR/GlpR family transcriptional regulator low > 62
Enterobacter asburiae PDN3 0.60 EX28DRAFT_2666 Predicted glutamine amidotransferase 0.56 EX28DRAFT_4123 transcriptional regulator, DeoR family low > 76
Enterobacter sp. TBS_079 0.59 MPMX20_00912 Putative glutamine amidotransferase YafJ 0.55 MPMX20_04306 Glycerol-3-phosphate regulon repressor low > 85
Escherichia coli Nissle 1917 0.59 ECOLIN_RS01755 class II glutamine amidotransferase 0.57 ECOLIN_RS19540 DeoR/GlpR family transcriptional regulator
Escherichia coli BL21 0.59 ECD_00218 type 2 glutamine amidotransferase family protein 0.57 ECD_03274 DNA-binding transcriptional repressor low > 60
Escherichia coli ECOR27 0.59 NOLOHH_02140 yafJ Putative glutamine amidotransferase YafJ 0.57 NOLOHH_08735 glpR DeoR/GlpR family transcriptional regulator low > 57
Klebsiella michiganensis M5al 0.59 BWI76_RS05480 class II glutamine amidotransferase 0.56 BWI76_RS26175 DeoR/GlpR family transcriptional regulator low > 92
Escherichia coli BW25113 0.59 b0223 yafJ predicted amidotransfease (NCBI) 0.57 b3423 glpR DNA-binding transcriptional repressor (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.59 OHPLBJKB_03416 Putative glutamine amidotransferase YafJ 0.57 OHPLBJKB_00281 Glycerol-3-phosphate regulon repressor 0.38 40
Escherichia coli ECOR38 0.59 HEPCGN_07875 yafJ Putative glutamine amidotransferase YafJ 0.57 HEPCGN_15760 glpR DeoR/GlpR family transcriptional regulator low > 85
Escherichia fergusonii Becca 0.59 EFB2_03794 Putative glutamine amidotransferase YafJ 0.57 EFB2_00406 Glycerol-3-phosphate regulon repressor low > 86
Escherichia coli ECRC62 0.59 BNILDI_00335 yafJ Putative glutamine amidotransferase YafJ 0.57 BNILDI_02780 glpR DeoR/GlpR family transcriptional regulator
Escherichia coli ECRC101 0.59 OKFHMN_09770 yafJ class II glutamine amidotransferase 0.57 OKFHMN_16940 glpR DeoR/GlpR family transcriptional regulator
Escherichia coli ECRC99 0.59 KEDOAH_18385 yafJ class II glutamine amidotransferase 0.57 KEDOAH_11200 glpR DeoR/GlpR family transcriptional regulator
Escherichia coli ECRC102 0.59 NIAGMN_07630 yafJ class II glutamine amidotransferase 0.57 NIAGMN_14710 glpR DeoR/GlpR family transcriptional regulator
Escherichia coli ECRC101 0.59 MCAODC_00290 yafJ class II glutamine amidotransferase 0.57 MCAODC_07470 glpR DeoR/GlpR family transcriptional regulator
Escherichia coli ECRC98 0.59 JDDGAC_13395 yafJ class II glutamine amidotransferase 0.57 JDDGAC_20570 glpR DeoR/GlpR family transcriptional regulator
Azospirillum brasilense Sp245 0.58 AZOBR_RS05605 glutamine amidotransferase 0.50 AZOBR_RS25600 DeoR faimly transcriptional regulator
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF4102 Predicted glutamine amidotransferase 0.56 GFF590 Glycerol-3-phosphate regulon repressor, DeoR family low > 78
Rahnella sp. WP5 0.58 EX31_RS21015 class II glutamine amidotransferase 0.56 EX31_RS04995 DeoR/GlpR family transcriptional regulator low > 89
Serratia liquefaciens MT49 0.58 IAI46_04345 class II glutamine amidotransferase 0.57 IAI46_23910 DeoR/GlpR family transcriptional regulator low > 86
Erwinia tracheiphila SCR3 0.58 LU632_RS01140 class II glutamine amidotransferase 0.58 LU632_RS23005 DeoR/GlpR family transcriptional regulator low > 74
Pectobacterium carotovorum WPP14 0.58 HER17_RS04650 class II glutamine amidotransferase 0.60 HER17_RS01530 DeoR/GlpR family transcriptional regulator low > 75
Dickeya dianthicola 67-19 0.58 HGI48_RS16655 class II glutamine amidotransferase 0.59 HGI48_RS19800 DeoR/GlpR family transcriptional regulator low > 71
Dickeya dianthicola ME23 0.57 DZA65_RS17745 class II glutamine amidotransferase 0.59 DZA65_RS20890 DeoR/GlpR family transcriptional regulator
Pantoea sp. MT58 0.57 IAI47_15185 class II glutamine amidotransferase 0.56 IAI47_01765 DeoR/GlpR family transcriptional regulator low > 76
Dickeya dadantii 3937 0.57 DDA3937_RS16585 class II glutamine amidotransferase 0.59 DDA3937_RS19670 DeoR/GlpR family transcriptional regulator low > 74
Herbaspirillum seropedicae SmR1 0.51 HSERO_RS24040 glutamine amidotransferase 0.47 HSERO_RS04835 DeoR faimly transcriptional regulator
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_04266 glutamine amidotransferase 0.55 H281DRAFT_04225 transcriptional regulator, DeoR family low > 103
Paraburkholderia graminis OAS925 0.50 ABIE53_003506 putative glutamine amidotransferase 0.52 ABIE53_003465 DeoR family glycerol-3-phosphate regulon repressor low > 113
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS26860 class II glutamine amidotransferase 0.54 QEN71_RS02250 DeoR/GlpR family DNA-binding transcription regulator low > 153
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS02595 glutamine amidotransferase 0.49 RR42_RS13795 DeoR family transcriptional regulator
Variovorax sp. OAS795 0.48 ABID97_RS04635 class II glutamine amidotransferase 0.51 ABID97_RS19960 DeoR/GlpR family DNA-binding transcription regulator
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS16680 glutamine amidotransferase 0.54 BPHYT_RS16470 DeoR faimly transcriptional regulator low > 109
Ralstonia solanacearum PSI07 0.47 RPSI07_RS21635 class II glutamine amidotransferase 0.48 RPSI07_RS09890 DeoR/GlpR transcriptional regulator low > 81
Ralstonia solanacearum GMI1000 0.47 RS_RS02405 class II glutamine amidotransferase 0.48 RS_RS15295 DeoR/GlpR transcriptional regulator low > 80
Ralstonia solanacearum UW163 0.47 UW163_RS02010 class II glutamine amidotransferase 0.48 UW163_RS06265 DeoR/GlpR transcriptional regulator
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS11575 class II glutamine amidotransferase 0.48 RALBFv3_RS07355 DeoR/GlpR transcriptional regulator low > 76
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS07540 class II glutamine amidotransferase 0.48 ABZR87_RS03015 DeoR/GlpR family DNA-binding transcription regulator low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.46 GFF3024 Glutamine amidotransferase, class-II 0.46 GFF2808 Glycerol-3-phosphate regulon repressor, DeoR family
Variovorax sp. SCN45 0.45 GFF6320 Putative glutamine amidotransferase YafJ 0.51 GFF2678 Glycerol-3-phosphate regulon repressor GlpR low > 127

Not shown: 9 genomes with orthologs for PS417_07455 only; 17 genomes with orthologs for PS417_05570 only