Conservation of cofitness between EX28DRAFT_0039 and EX28DRAFT_1684 in Enterobacter asburiae PDN3

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Enterobacter asburiae PDN3 1.0 EX28DRAFT_0039 16S rRNA (cytosine(967)-C(5))-methyltransferase 1.0 EX28DRAFT_1684 FeS assembly protein SufD 0.78 15
Enterobacter sp. TBS_079 0.95 MPMX20_04196 Ribosomal RNA small subunit methyltransferase B 0.94 MPMX20_01946 FeS cluster assembly protein SufD low > 85
Escherichia coli ECOR27 0.89 NOLOHH_09320 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.81 NOLOHH_17785 sufD Fe-S cluster assembly protein SufD 0.53 6
Escherichia coli ECRC62 0.89 BNILDI_02200 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.81 BNILDI_16575 sufD Fe-S cluster assembly protein SufD low > 75
Escherichia coli ECOR38 0.89 HEPCGN_16350 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.81 HEPCGN_05650 sufD Fe-S cluster assembly protein SufD low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.89 OHPLBJKB_00415 Ribosomal RNA small subunit methyltransferase B 0.81 OHPLBJKB_02043 FeS cluster assembly protein SufD low > 74
Escherichia coli BW25113 0.89 b3289 rsmB 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent (NCBI) 0.81 b1681 sufD component of SufBCD complex (NCBI) low > 76
Escherichia coli BL21 0.89 ECD_03139 16S rRNA m(5)C967 methyltransferase, SAM-dependent 0.81 ECD_01650 component of SufBCD Fe-S cluster assembly scaffold low > 61
Escherichia coli ECRC101 0.89 MCAODC_08050 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.81 MCAODC_18145 sufD Fe-S cluster assembly protein SufD low > 88
Escherichia coli ECRC100 0.89 OKFHMN_17520 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.81 OKFHMN_27265 sufD Fe-S cluster assembly protein SufD low > 79
Escherichia coli ECRC98 0.89 JDDGAC_21150 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.81 JDDGAC_01840 sufD Fe-S cluster assembly protein SufD low > 87
Escherichia coli ECRC99 0.89 KEDOAH_10620 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.81 KEDOAH_00845 sufD Fe-S cluster assembly protein SufD — —
Escherichia coli ECRC102 0.89 NIAGMN_15290 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.81 NIAGMN_00800 sufD Fe-S cluster assembly protein SufD low > 80
Escherichia fergusonii Becca 0.89 EFB2_00535 Ribosomal RNA small subunit methyltransferase B 0.82 EFB2_02311 FeS cluster assembly protein SufD low > 86
Escherichia coli Nissle 1917 0.89 ECOLIN_RS18875 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.81 ECOLIN_RS09400 Fe-S cluster assembly protein SufD low > 55
Klebsiella michiganensis M5al 0.88 BWI76_RS25680 16S rRNA m5C967 methyltransferase 0.75 BWI76_RS16985 signal peptide peptidase SppA — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF2390 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967 0.82 GFF3561 Iron-sulfur cluster assembly protein SufD low > 78
Klebsiella pneumoniae MKP103 0.87 KDGMDA_06550 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.75 KDGMDA_24155 Fe-S cluster assembly protein SufD low > 95
Dickeya dadantii 3937 0.75 DDA3937_RS19135 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.57 DDA3937_RS12765 Fe-S cluster assembly protein SufD low > 74
Serratia liquefaciens MT49 0.75 IAI46_23275 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.63 IAI46_11160 Fe-S cluster assembly protein SufD low > 86
Dickeya dianthicola ME23 0.74 DZA65_RS20350 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.58 DZA65_RS13295 Fe-S cluster assembly protein SufD low > 75
Dickeya dianthicola 67-19 0.74 HGI48_RS19225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.58 HGI48_RS12830 Fe-S cluster assembly protein SufD low > 71
Erwinia amylovora T8 0.74 OLJFJH_03720 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.63 OLJFJH_14580 Fe-S cluster assembly protein SufD — —
Pectobacterium carotovorum WPP14 0.73 HER17_RS02215 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.58 HER17_RS08935 Fe-S cluster assembly protein SufD low > 75
Erwinia tracheiphila SCR3 0.72 LU632_RS22480 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.64 LU632_RS11070 sufD Fe-S cluster assembly protein SufD — —
Erwinia tracheiphila HP pepo 2.2 0.72 IJEDHG_12470 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.64 IJEDHG_25285 sufD Fe-S cluster assembly protein SufD — —
Rahnella sp. WP5 0.72 EX31_RS15985 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.57 EX31_RS13895 Fe-S cluster assembly protein SufD — —
Pantoea sp. MT58 0.71 IAI47_02280 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.65 IAI47_10865 Fe-S cluster assembly protein SufD — —
Pantoea agglomerans CFBP13505 P0401 0.70 PagCFBP13505_RS22525 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.65 PagCFBP13505_RS17725 Fe-S cluster assembly protein SufD — —
Alteromonas macleodii MIT1002 0.42 MIT1002_00018 Ribosomal RNA small subunit methyltransferase B 0.19 MIT1002_02798 FeS cluster assembly protein SufD — —
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_10630 16S rRNA methyltransferase 0.22 AO353_24930 Fe-S cluster assembly protein SufD low > 101
Marinobacter adhaerens HP15 0.40 HP15_3742 Fmu, rRNA SAM-dependent methyltransferase 0.21 HP15_2986 FeS assembly protein SufD — —
Lysobacter sp. OAE881 0.35 ABIE51_RS02255 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.19 ABIE51_RS15740 Fe-S cluster assembly protein SufD — —
Dyella japonica UNC79MFTsu3.2 0.32 ABZR86_RS13890 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.18 ABZR86_RS09465 Fe-S cluster assembly protein SufD — —
Rhodanobacter sp. FW510-T8 0.32 OKGIIK_13790 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.21 OKGIIK_09955 sufD Fe-S cluster assembly protein SufD — —
Xanthomonas campestris pv. campestris strain 8004 0.32 Xcc-8004.4741.1 hypothetical protein 0.21 Xcc-8004.1698.1 Iron-sulfur cluster assembly protein SufD — —
Castellaniella sp019104865 MT123 0.31 ABCV34_RS14225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.21 ABCV34_RS04685 Fe-S cluster assembly protein SufD — —
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS10125 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.20 LRK54_RS03085 Fe-S cluster assembly protein SufD — —
Rhodanobacter denitrificans MT42 0.29 LRK55_RS09765 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.20 LRK55_RS02835 Fe-S cluster assembly protein SufD — —
Rhodanobacter sp000427505 FW510-R12 0.28 LRK53_RS02905 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.20 LRK53_RS06885 Fe-S cluster assembly protein SufD — —
Synechococcus elongatus PCC 7942 0.26 Synpcc7942_0962 sun sun protein 0.23 Synpcc7942_1737 sufD Iron-regulated ABC transporter permease protein SufD — —
Synechocystis sp000284455 PCC 6803 0.24 SGL_RS03855 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.16 SGL_RS15260 Fe-S cluster assembly protein SufD — —
Xanthobacter sp. DMC5 0.24 GFF3851 Ribosomal RNA small subunit methyltransferase B 0.18 GFF1043 FeS cluster assembly protein SufD — —
Rhodopseudomonas palustris CGA009 0.24 TX73_000155 transcription antitermination factor NusB 0.21 TX73_012750 Fe-S cluster assembly protein SufD low > 86
Azospirillum brasilense Sp245 0.22 AZOBR_RS00235 MFS transporter 0.23 AZOBR_RS14840 Fe-S cluster assembly protein SufD — —
Azospirillum sp. SherDot2 0.22 MPMX19_02327 Ribosomal RNA small subunit methyltransferase B 0.20 MPMX19_04832 FeS cluster assembly protein SufD — —
Rhizobium sp. OAE497 0.22 ABIE40_RS19140 RsmB/NOP family class I SAM-dependent RNA methyltransferase 0.16 ABIE40_RS09995 Fe-S cluster assembly protein SufD — —
Caulobacter crescentus NA1000 0.21 CCNA_00101 16S rRNA m5C methyltransferase RsmB 0.14 CCNA_01937 FeS assembly protein SufD — —
Caulobacter crescentus NA1000 Δfur 0.21 CCNA_00101 16S rRNA m5C methyltransferase RsmB 0.14 CCNA_01937 FeS assembly protein SufD — —
Bosea sp. OAE506 0.21 ABIE41_RS05105 RsmB/NOP family class I SAM-dependent RNA methyltransferase 0.20 ABIE41_RS16985 SufD family Fe-S cluster assembly protein — —
Rhodospirillum rubrum S1H 0.21 Rru_A3660 tRNA and rRNA cytosine-C5-methylase (NCBI) 0.20 Rru_A2571 FeS assembly protein SufD (NCBI) — —
Dinoroseobacter shibae DFL-12 0.20 Dshi_3033 Fmu (Sun) domain protein (RefSeq) 0.17 Dshi_1626 SufBD protein (RefSeq) — —
Agrobacterium fabrum C58 0.20 Atu2825 Sun protein 0.16 Atu1822 transport system — —
Phaeobacter inhibens DSM 17395 0.18 PGA1_c32880 putative ribosomal RNA small subunit methyltransferase B 0.19 PGA1_c15400 protein SufD — —
Sphingomonas koreensis DSMZ 15582 0.17 Ga0059261_2239 tRNA and rRNA cytosine-C5-methylases 0.15 Ga0059261_1474 ABC-type transport system involved in Fe-S cluster assembly, permease component — —

Not shown: 51 genomes with orthologs for EX28DRAFT_0039 only; 11 genomes with orthologs for EX28DRAFT_1684 only