Conservation of cofitness between ECD_03237 and ECD_03197 in Escherichia coli BL21

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03237 phosphoglycolate phosphatase 1.0 ECD_03197 putative PAS domain-containing DNA-binding transcriptional regulator low > 61
Escherichia coli BW25113 1.00 b3385 gph phosphoglycolate phosphatase (NCBI) 1.00 b3346 yheO orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECRC100 0.99 OKFHMN_17135 gph phosphoglycolate phosphatase 1.00 OKFHMN_17300 yheO Uncharacterized protein YheO low > 80
Escherichia coli ECRC98 0.99 JDDGAC_20765 gph phosphoglycolate phosphatase 1.00 JDDGAC_20930 yheO Uncharacterized protein YheO low > 86
Escherichia coli ECRC99 0.99 KEDOAH_11005 gph phosphoglycolate phosphatase 1.00 KEDOAH_10840 yheO Uncharacterized protein YheO — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS19340 phosphoglycolate phosphatase 1.00 ECOLIN_RS19165 transcriptional regulator low > 55
Escherichia coli ECRC102 0.99 NIAGMN_14905 gph phosphoglycolate phosphatase 1.00 NIAGMN_15070 yheO Uncharacterized protein YheO — —
Escherichia coli ECOR38 0.99 HEPCGN_15955 gph phosphoglycolate phosphatase 1.00 HEPCGN_16130 yheO Uncharacterized protein YheO low > 87
Escherichia coli ECRC101 0.99 MCAODC_07665 gph phosphoglycolate phosphatase 1.00 MCAODC_07830 yheO Uncharacterized protein YheO low > 87
Escherichia coli ECRC62 0.99 BNILDI_02595 gph phosphoglycolate phosphatase 1.00 BNILDI_02420 yheO Uncharacterized protein YheO low > 75
Escherichia coli ECOR27 0.99 NOLOHH_08925 gph phosphoglycolate phosphatase 1.00 NOLOHH_09100 yheO Uncharacterized protein YheO low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_00318 Phosphoglycolate phosphatase 1.00 OHPLBJKB_00357 Transcriptional regulator DauR low > 73
Escherichia fergusonii Becca 0.99 EFB2_00443 Phosphoglycolate phosphatase 1.00 EFB2_00477 Transcriptional regulator DauR low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF634 Phosphoglycolate phosphatase (EC 3.1.3.18) 0.99 GFF3726 YheO-like PAS domain low > 78
Enterobacter asburiae PDN3 0.80 EX28DRAFT_4157 2-phosphoglycolate phosphatase, prokaryotic 0.99 EX28DRAFT_4184 Uncharacterized protein conserved in bacteria low > 76
Enterobacter sp. TBS_079 0.80 MPMX20_04274 Phosphoglycolate phosphatase 0.99 MPMX20_04239 Transcriptional regulator DauR low > 85
Klebsiella michiganensis M5al 0.79 BWI76_RS26065 phosphoglycolate phosphatase 0.96 BWI76_RS25905 hypothetical protein low > 92
Dickeya dadantii 3937 0.56 DDA3937_RS19525 phosphoglycolate phosphatase 0.89 DDA3937_RS19340 transcriptional regulator low > 74
Dickeya dianthicola ME23 0.56 DZA65_RS20740 phosphoglycolate phosphatase 0.89 DZA65_RS20560 transcriptional regulator low > 75
Dickeya dianthicola 67-19 0.56 HGI48_RS19655 phosphoglycolate phosphatase 0.89 HGI48_RS19440 transcriptional regulator low > 71
Serratia liquefaciens MT49 0.55 IAI46_23680 phosphoglycolate phosphatase 0.88 IAI46_23490 transcriptional regulator low > 86
Pectobacterium carotovorum WPP14 0.55 HER17_RS01800 phosphoglycolate phosphatase 0.88 HER17_RS02010 transcriptional regulator low > 75
Pantoea sp. MT58 0.53 IAI47_01915 phosphoglycolate phosphatase 0.87 IAI47_02055 transcriptional regulator low > 76
Erwinia tracheiphila SCR3 0.51 LU632_RS22845 phosphoglycolate phosphatase 0.87 LU632_RS22710 transcriptional regulator low > 74
Rahnella sp. WP5 0.48 EX31_RS04700 phosphoglycolate phosphatase 0.89 EX31_RS04470 transcriptional regulator low > 89
Pseudomonas putida KT2440 0.37 PP_0416 Phosphoglycolate phosphatase 0.13 PP_2931 conserved protein of unknown function low > 96
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_1216 Phosphoglycolate phosphatase (EC 3.1.3.18) 0.15 PfGW456L13_1693 YheO-like PAS domain low > 87
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_2544 Phosphoglycolate phosphatase (EC 3.1.3.18) 0.14 Pf1N1B4_923 YheO-like PAS domain low > 87
Shewanella sp. ANA-3 0.34 Shewana3_3887 phosphoglycolate phosphatase (RefSeq) 0.34 Shewana3_2973 YheO domain-containing protein (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.34 CSW01_13280 phosphoglycolate phosphatase 0.64 CSW01_01875 hypothetical protein low > 62
Shewanella oneidensis MR-1 0.34 SO0293 gph phosphoglycolate phosphatase (NCBI ptt file) 0.34 SO1402 conserved hypothetical protein (NCBI ptt file) low > 76
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_14415 phosphoglycolate phosphatase 0.13 AO356_17355 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_4821 Phosphoglycolate phosphatase (EC 3.1.3.18) 0.14 Pf6N2E2_5396 YheO-like PAS domain low > 103
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_07235 phosphoglycolate phosphatase 0.15 AO353_04640 hypothetical protein low > 101
Pseudomonas sp. RS175 0.33 PFR28_04048 Phosphoglycolate phosphatase 0.12 PFR28_03547 Transcriptional regulator DauR low > 88
Pseudomonas simiae WCS417 0.33 PS417_25730 phosphoglycolate phosphatase 0.13 PS417_12915 DNA-binding protein low > 88
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS27385 phosphoglycolate phosphatase 0.14 PFLU_RS13585 DNA-binding protein low > 109
Pseudomonas fluorescens SBW25 0.32 PFLU_RS27385 phosphoglycolate phosphatase 0.14 PFLU_RS13585 DNA-binding protein low > 109
Paraburkholderia sabiae LMG 24235 0.26 QEN71_RS27545 phosphoglycolate phosphatase 0.14 QEN71_RS18565 PAS domain-containing protein low > 153
Variovorax sp. SCN45 0.26 GFF5899 Phosphoglycolate phosphatase (EC 3.1.3.18) 0.13 GFF2493 YheO-like PAS domain low > 127
Herbaspirillum seropedicae SmR1 0.26 HSERO_RS19430 phosphoglycolate phosphatase 0.12 HSERO_RS01425 DNA-binding protein low > 78
Burkholderia phytofirmans PsJN 0.26 BPHYT_RS17385 phosphoglycolate phosphatase 0.11 BPHYT_RS10285 hypothetical protein low > 109
Ralstonia solanacearum PSI07 0.26 RPSI07_RS07070 phosphoglycolate phosphatase 0.14 RPSI07_RS06825 DNA-binding protein low > 81
Paraburkholderia graminis OAS925 0.26 ABIE53_003639 phosphoglycolate phosphatase 0.11 ABIE53_005722 putative transcriptional regulator YheO low > 113
Cupriavidus basilensis FW507-4G11 0.25 RR42_RS18290 phosphoglycolate phosphatase 0.13 RR42_RS11120 DNA-binding protein low > 128
Acidovorax sp. GW101-3H11 0.25 Ac3H11_763 Phosphoglycolate phosphatase (EC 3.1.3.18) 0.13 Ac3H11_38 YheO-like PAS domain low > 79
Ralstonia solanacearum GMI1000 0.24 RS_RS02910 phosphoglycolate phosphatase 0.14 RS_RS24435 DNA-binding protein low > 80
Paraburkholderia bryophila 376MFSha3.1 0.24 H281DRAFT_05716 phosphoglycolate phosphatase 0.12 H281DRAFT_05884 Predicted transcriptional regulator YheO, contains PAS and DNA-binding HTH domains low > 103
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS02135 phosphoglycolate phosphatase 0.15 ABZR87_RS17665 PAS domain-containing protein low > 80
Ralstonia solanacearum UW163 0.21 UW163_RS07145 phosphoglycolate phosphatase 0.14 UW163_RS17980 DNA-binding protein — —
Ralstonia solanacearum IBSBF1503 0.21 RALBFv3_RS06480 phosphoglycolate phosphatase 0.14 RALBFv3_RS16625 DNA-binding protein low > 76
Desulfovibrio vulgaris Hildenborough JW710 0.21 DVU0130 phosphoglycolate phosphatase, putative (TIGR) 0.20 DVU2206 conserved hypothetical protein (TIGR) low > 55
Rhizobium sp. OAE497 0.20 ABIE40_RS10530 HAD family hydrolase 0.15 ABIE40_RS21180 PAS domain-containing protein low > 107

Not shown: 35 genomes with orthologs for ECD_03237 only; 2 genomes with orthologs for ECD_03197 only