Conservation of cofitness between ECD_04037 and ECD_02543 in Escherichia coli BL21

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_04037 methyl-directed mismatch repair protein 1.0 ECD_02543 glutamate-cysteine ligase 0.48 2
Escherichia coli BW25113 1.00 b4170 mutL DNA mismatch repair protein (NCBI) 1.00 b2688 gshA glutamate--cysteine ligase (NCBI) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_04530 mutL DNA mismatch repair endonuclease MutL 0.99 NOLOHH_12600 gshA glutamate--cysteine ligase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03872 DNA mismatch repair protein MutL 1.00 OHPLBJKB_01045 Glutamate--cysteine ligase low > 73
Escherichia coli ECRC62 1.00 BNILDI_06960 mutL DNA mismatch repair endonuclease MutL 0.99 BNILDI_11160 gshA glutamate--cysteine ligase low > 75
Escherichia coli ECOR38 0.99 HEPCGN_10495 mutL DNA mismatch repair endonuclease MutL 1.00 HEPCGN_19955 gshA glutamate--cysteine ligase 0.79 46
Escherichia coli ECRC100 0.99 OKFHMN_12265 mutL DNA mismatch repair endonuclease MutL 1.00 OKFHMN_20760 gshA glutamate--cysteine ligase low > 80
Escherichia coli ECRC98 0.99 JDDGAC_15905 mutL DNA mismatch repair endonuclease MutL 1.00 JDDGAC_24425 gshA glutamate--cysteine ligase low > 86
Escherichia coli ECRC101 0.99 MCAODC_02780 mutL DNA mismatch repair endonuclease MutL 1.00 MCAODC_11285 gshA glutamate--cysteine ligase low > 87
Escherichia coli ECRC99 0.99 KEDOAH_15890 mutL DNA mismatch repair endonuclease MutL 1.00 KEDOAH_07375 gshA glutamate--cysteine ligase — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS24220 DNA mismatch repair endonuclease MutL 1.00 ECOLIN_RS14990 glutamate--cysteine ligase low > 55
Escherichia coli ECRC102 0.99 NIAGMN_10115 mutL DNA mismatch repair endonuclease MutL 1.00 NIAGMN_18530 gshA glutamate--cysteine ligase — —
Escherichia fergusonii Becca 0.99 EFB2_04365 DNA mismatch repair protein MutL 1.00 EFB2_01238 Glutamate--cysteine ligase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF823 DNA mismatch repair protein MutL 0.95 GFF1597 Glutamate--cysteine ligase (EC 6.3.2.2) low > 78
Klebsiella michiganensis M5al 0.83 BWI76_RS02525 DNA mismatch repair protein MutL 0.88 BWI76_RS22120 glutamate--cysteine ligase low > 92
Enterobacter sp. TBS_079 0.81 MPMX20_00451 DNA mismatch repair protein MutL 0.88 MPMX20_03568 Glutamate--cysteine ligase low > 85
Enterobacter asburiae PDN3 0.80 EX28DRAFT_3367 DNA mismatch repair protein MutL 0.88 EX28DRAFT_2774 glutamate-cysteine ligase (EC 6.3.2.2) low > 76
Pantoea sp. MT58 0.67 IAI47_02580 DNA mismatch repair endonuclease MutL 0.70 IAI47_04350 glutamate--cysteine ligase low > 76
Serratia liquefaciens MT49 0.67 IAI46_01615 DNA mismatch repair endonuclease MutL 0.76 IAI46_03895 glutamate--cysteine ligase low > 86
Erwinia tracheiphila SCR3 0.65 LU632_RS02045 mutL DNA mismatch repair endonuclease MutL 0.70 LU632_RS15690 gshA glutamate--cysteine ligase low > 74
Rahnella sp. WP5 0.65 EX31_RS08830 DNA mismatch repair endonuclease MutL 0.74 EX31_RS07750 glutamate--cysteine ligase low > 89
Pectobacterium carotovorum WPP14 0.64 HER17_RS02575 DNA mismatch repair endonuclease MutL 0.74 HER17_RS05095 glutamate--cysteine ligase low > 75
Dickeya dadantii 3937 0.62 DDA3937_RS18620 DNA mismatch repair endonuclease MutL 0.74 DDA3937_RS16195 glutamate--cysteine ligase low > 74
Dickeya dianthicola 67-19 0.61 HGI48_RS18555 DNA mismatch repair endonuclease MutL 0.72 HGI48_RS16305 glutamate--cysteine ligase low > 71
Dickeya dianthicola ME23 0.61 DZA65_RS19690 DNA mismatch repair endonuclease MutL 0.72 DZA65_RS17400 glutamate--cysteine ligase low > 75
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_01825 DNA mismatch repair protein MutL 0.55 CSW01_02970 glutamate--cysteine ligase low > 62
Shewanella amazonensis SB2B 0.39 Sama_3027 mutL DNA mismatch repair protein (RefSeq) 0.46 Sama_1058 glutamate--cysteine ligase (RefSeq) 0.48 10
Shewanella oneidensis MR-1 0.39 SO0601 mutL DNA mismatch repair protein MutL (NCBI ptt file) 0.43 SO3559 gshA glutamate--cysteine ligase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.38 Shew_0564 DNA mismatch repair protein MutL (RefSeq) 0.43 Shew_1227 glutamate--cysteine ligase (RefSeq) low > 60
Shewanella sp. ANA-3 0.38 Shewana3_0595 mutL DNA mismatch repair protein (RefSeq) 0.43 Shewana3_3160 glutamate-cysteine ligase (RefSeq) — —
Pseudomonas stutzeri RCH2 0.36 Psest_0681 DNA mismatch repair protein MutL 0.36 Psest_3998 glutamate--cysteine ligase low > 67
Pseudomonas sp. S08-1 0.36 OH686_09480 DNA mismatch repair protein MutL 0.37 OH686_11110 glutamate--cysteine ligase low > 80
Marinobacter adhaerens HP15 0.35 HP15_2501 DNA mismatch repair protein mutL 0.33 HP15_217 glutamate--cysteine ligase — —
Pseudomonas putida KT2440 0.35 PP_4896 DNA mismatch repair protein MutL 0.37 PP_0243 Glutamate--cysteine ligase — —
Pseudomonas simiae WCS417 0.35 PS417_02480 DNA mismatch repair protein 0.36 PS417_01155 glutamate--cysteine ligase — —
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS02560 DNA mismatch repair endonuclease MutL 0.36 PFLU_RS01265 glutamate--cysteine ligase — —
Pseudomonas fluorescens SBW25 0.35 PFLU_RS02560 DNA mismatch repair endonuclease MutL 0.36 PFLU_RS01265 glutamate--cysteine ligase — —
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_3616 DNA mismatch repair protein MutL 0.37 Pf6N2E2_3908 Glutamate--cysteine ligase (EC 6.3.2.2) low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_0570 DNA mismatch repair protein MutL 0.35 Psyr_0255 glutamate-cysteine ligase — —
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_0570 DNA mismatch repair protein MutL 0.35 Psyr_0255 glutamate-cysteine ligase low > 86
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_156 DNA mismatch repair protein MutL 0.37 PfGW456L13_430 Glutamate--cysteine ligase (EC 6.3.2.2) low > 87
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_08665 DNA mismatch repair protein 0.37 AO356_10185 glutamate--cysteine ligase low > 104
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_1414 DNA mismatch repair protein MutL 0.37 Pf1N1B4_1769 Glutamate--cysteine ligase (EC 6.3.2.2) — —
Pseudomonas sp. RS175 0.34 PFR28_05119 DNA mismatch repair protein MutL 0.38 PFR28_04865 Glutamate--cysteine ligase low > 88
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_13135 DNA mismatch repair protein 0.37 AO353_11730 glutamate--cysteine ligase low > 101
Herbaspirillum seropedicae SmR1 0.28 HSERO_RS04190 DNA mismatch repair protein 0.35 HSERO_RS07300 glutamate--cysteine ligase low > 78
Paraburkholderia sabiae LMG 24235 0.26 QEN71_RS26435 DNA mismatch repair endonuclease MutL 0.33 QEN71_RS29600 glutamate--cysteine ligase low > 153
Acinetobacter radioresistens SK82 0.25 MPMX26_01207 DNA mismatch repair protein MutL 0.33 MPMX26_02950 Glutamate--cysteine ligase low > 36
Paraburkholderia bryophila 376MFSha3.1 0.25 H281DRAFT_04712 DNA mismatch repair protein MutL 0.34 H281DRAFT_02339 glutamate-cysteine ligase low > 103
Acidovorax sp. GW101-3H11 0.25 Ac3H11_313 DNA mismatch repair protein MutL 0.31 Ac3H11_3126 Glutamate--cysteine ligase (EC 6.3.2.2) low > 79
Castellaniella sp019104865 MT123 0.25 ABCV34_RS08785 DNA mismatch repair endonuclease MutL 0.33 ABCV34_RS10935 glutamate--cysteine ligase — —
Burkholderia phytofirmans PsJN 0.25 BPHYT_RS03650 DNA mismatch repair protein 0.37 BPHYT_RS00520 glutamate--cysteine ligase low > 109
Hydrogenophaga sp. GW460-11-11-14-LB1 0.24 GFF5485 DNA mismatch repair protein MutL 0.33 GFF3561 Glutamate--cysteine ligase (EC 6.3.2.2) low > 90
Variovorax sp. SCN45 0.24 GFF4800 DNA mismatch repair protein MutL 0.32 GFF7064 Glutamate--cysteine ligase (EC 6.3.2.2) low > 127
Variovorax sp. OAS795 0.24 ABID97_RS20310 DNA mismatch repair endonuclease MutL 0.34 ABID97_RS20965 glutamate--cysteine ligase low > 91

Not shown: 25 genomes with orthologs for ECD_04037 only; 3 genomes with orthologs for ECD_02543 only