| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BL21 | 1.0 | ECD_01084 | | DUF177 family protein | 1.0 | ECD_02409 | | dual specificity 23S rRNA m(2)A2503, tRNA m(2)A37 methyltransferase, SAM-dependent | 0.80 | 10 |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_21130 | yceD | 23S rRNA accumulation protein YceD | 1.00 | NOLOHH_13360 | rlmN | bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN | low | > 75 |
| Escherichia coli ECRC99 | 1.00 | KEDOAH_24155 | yceD | 23S rRNA accumulation protein YceD | 1.00 | KEDOAH_06510 | rlmN | bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN | — | — |
| Escherichia coli ECRC62 | 1.00 | BNILDI_19290 | yceD | 23S rRNA accumulation protein YceD | 1.00 | BNILDI_12160 | rlmN | bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN | low | > 75 |
| Escherichia fergusonii Becca | 1.00 | EFB2_02887 | | Large ribosomal RNA subunit accumulation protein YceD | 1.00 | EFB2_01373 | | Dual-specificity RNA methyltransferase RlmN | low | > 86 |
| Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS06290 | | 23S rRNA accumulation protein YceD | 1.00 | ECOLIN_RS14300 | | bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN | low | > 55 |
| Escherichia coli ECRC102 | 1.00 | NIAGMN_24230 | yceD | 23S rRNA accumulation protein YceD | 1.00 | NIAGMN_19480 | rlmN | bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN | — | — |
| Escherichia coli ECRC101 | 1.00 | MCAODC_22960 | yceD | 23S rRNA accumulation protein YceD | 1.00 | MCAODC_12240 | rlmN | bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN | low | > 87 |
| Escherichia coli BW25113 | 1.00 | b1088 | yceD | hypothetical protein (NCBI) | 1.00 | b2517 | yfgB | predicted enzyme (NCBI) | low | > 76 |
| Escherichia coli ECRC100 | 1.00 | OKFHMN_03600 | yceD | 23S rRNA accumulation protein YceD | 1.00 | OKFHMN_21710 | rlmN | bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN | low | > 80 |
| Escherichia coli ECOR38 | 1.00 | HEPCGN_23880 | yceD | 23S rRNA accumulation protein YceD | 1.00 | HEPCGN_20830 | rlmN | bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN | low | > 87 |
| Escherichia coli ECRC98 | 1.00 | JDDGAC_07260 | yceD | 23S rRNA accumulation protein YceD | 1.00 | JDDGAC_25385 | rlmN | bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.99 | OHPLBJKB_02578 | | Large ribosomal RNA subunit accumulation protein YceD | 1.00 | OHPLBJKB_01192 | | Dual-specificity RNA methyltransferase RlmN | low | > 73 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.97 | GFF3370 | | COG1399 protein, clustered with ribosomal protein L32p | 0.96 | GFF2414 | | Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) | 0.82 | 1 |
| Enterobacter asburiae PDN3 | 0.94 | EX28DRAFT_1841 | | Predicted metal-binding, possibly nucleic acid-binding protein | 0.94 | EX28DRAFT_0126 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase | low | > 76 |
| Enterobacter sp. TBS_079 | 0.94 | MPMX20_01768 | | Large ribosomal RNA subunit accumulation protein YceD | 0.94 | MPMX20_03395 | | Dual-specificity RNA methyltransferase RlmN | low | > 85 |
| Klebsiella michiganensis M5al | 0.87 | BWI76_RS11065 | | hypothetical protein | 0.94 | BWI76_RS21095 | | bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN | — | — |
| Rahnella sp. WP5 | 0.85 | EX31_RS24410 | | 23S rRNA accumulation protein YceD | 0.86 | EX31_RS20525 | | bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN | low | > 89 |
| Erwinia tracheiphila SCR3 | 0.84 | LU632_RS14845 | yceD | 23S rRNA accumulation protein YceD | 0.88 | LU632_RS17815 | | bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.84 | HER17_RS08625 | | 23S rRNA accumulation protein YceD | 0.89 | HER17_RS06085 | | bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN | low | > 75 |
| Dickeya dadantii 3937 | 0.84 | DDA3937_RS13145 | | 23S rRNA accumulation protein YceD | 0.89 | DDA3937_RS15480 | | bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN | 0.62 | 26 |
| Dickeya dianthicola ME23 | 0.83 | DZA65_RS13680 | | 23S rRNA accumulation protein YceD | 0.88 | DZA65_RS16665 | | bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN | — | — |
| Dickeya dianthicola 67-19 | 0.82 | HGI48_RS13210 | | 23S rRNA accumulation protein YceD | 0.88 | HGI48_RS15590 | | bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN | low | > 71 |
| Pantoea sp. MT58 | 0.79 | IAI47_12095 | | 23S rRNA accumulation protein YceD | 0.87 | IAI47_05040 | | bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN | — | — |
| Serratia liquefaciens MT49 | 0.73 | IAI46_09765 | | 23S rRNA accumulation protein YceD | 0.88 | IAI46_19290 | | bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.50 | CSW01_10120 | | 23S rRNA accumulation protein YceD | 0.72 | CSW01_03930 | | bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN | — | — |
| Alteromonas macleodii MIT1002 | 0.46 | MIT1002_01728 | | hypothetical protein | 0.73 | MIT1002_02791 | | Dual-specificity RNA methyltransferase RlmN | — | — |
| Shewanella oneidensis MR-1 | 0.44 | SO2781 | | conserved hypothetical protein (NCBI ptt file) | 0.75 | SO3315 | | conserved hypothetical protein TIGR00048 (NCBI ptt file) | — | — |
| Shewanella loihica PV-4 | 0.44 | Shew_1598 | | hypothetical protein (RefSeq) | 0.73 | Shew_1287 | | hypothetical protein (RefSeq) | — | — |
| Shewanella amazonensis SB2B | 0.44 | Sama_1985 | | hypothetical protein (RefSeq) | 0.73 | Sama_2368 | | hypothetical protein (RefSeq) | — | — |
| Shewanella sp. ANA-3 | 0.44 | Shewana3_2563 | | hypothetical protein (RefSeq) | 0.75 | Shewana3_1226 | | hypothetical protein (RefSeq) | — | — |
| Pseudomonas stutzeri RCH2 | 0.27 | Psest_1684 | | Predicted metal-binding, possibly nucleic acid-binding protein | 0.55 | Psest_1259 | | 23S rRNA m2A2503 methyltransferase | — | — |
| Marinobacter adhaerens HP15 | 0.25 | HP15_2217 | | protein containing DUF177 | 0.53 | HP15_1490 | | conserved hypothetical protein | — | — |
| Pseudomonas sp. RS175 | 0.22 | PFR28_03014 | | Large ribosomal RNA subunit accumulation protein YceD | 0.55 | PFR28_00294 | | Dual-specificity RNA methyltransferase RlmN | — | — |
| Lysobacter sp. OAE881 | 0.21 | ABIE51_RS13965 | | YceD family protein | 0.49 | ABIE51_RS09415 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.20 | Xcc-8004.4000.1 | | COG1399 protein, clustered with ribosomal protein L32p | 0.50 | Xcc-8004.2737.1 | | Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) | low | > 74 |
| Pseudomonas putida KT2440 | 0.19 | PP_1910 | | conserved protein of unknown function | 0.55 | PP_0850 | | Dual-specificity RNA methyltransferase RlmN | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.18 | ABZR86_RS06190 | | YceD family protein | 0.52 | ABZR86_RS05455 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | 0.53 | 28 |
| Pseudomonas fluorescens SBW25-INTG | 0.18 | PFLU_RS23075 | | hypothetical protein | 0.55 | PFLU_RS24815 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | — | — |
| Pseudomonas fluorescens SBW25 | 0.18 | PFLU_RS23075 | | hypothetical protein | 0.55 | PFLU_RS24815 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | low | > 109 |
| Kangiella aquimarina DSM 16071 | 0.17 | B158DRAFT_1758 | | Predicted metal-binding, possibly nucleic acid-binding protein | 0.58 | B158DRAFT_1149 | | 23S rRNA m2A2503 methyltransferase | low | > 40 |
| Pseudomonas simiae WCS417 | 0.17 | PS417_21460 | | metal-binding protein | 0.55 | PS417_23160 | | 50S rRNA methyltransferase | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.17 | AO353_01385 | | metal-binding protein | 0.56 | AO353_15875 | | 23S rRNA (adenine(2503)-C2)-methyltransferase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.17 | Pf1N1B4_455 | | COG1399 protein, clustered with ribosomal protein L32p | 0.56 | Pf1N1B4_857 | | Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.17 | PfGW456L13_2101 | | COG1399 protein, clustered with ribosomal protein L32p | 0.56 | PfGW456L13_4865 | | Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.16 | Pf6N2E2_5948 | | COG1399 protein, clustered with ribosomal protein L32p | 0.55 | Pf6N2E2_3181 | | Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.16 | AO356_20145 | | metal-binding protein | 0.56 | AO356_06605 | | 23S rRNA (adenine(2503)-C2)-methyltransferase | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.16 | Psyr_1643 | | Protein of unknown function DUF177 | 0.56 | Psyr_1245 | | 23S rRNA m(2)A-2503 methyltransferase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.16 | Psyr_1643 | | Protein of unknown function DUF177 | 0.56 | Psyr_1245 | | 23S rRNA m(2)A-2503 methyltransferase | — | — |
| Dechlorosoma suillum PS | 0.16 | Dsui_2443 | | putative metal-binding protein, possibly nucleic-acid binding protein | 0.52 | Dsui_3145 | | 23S rRNA m2A2503 methyltransferase | — | — |
| Rhodanobacter sp. FW510-T8 | 0.15 | OKGIIK_05695 | | Large ribosomal RNA subunit accumulation protein YceD | 0.53 | OKGIIK_07140 | rlmN | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | low | > 52 |
| Herbaspirillum seropedicae SmR1 | 0.15 | HSERO_RS09580 | | DNA-binding protein | 0.50 | HSERO_RS14810 | | 50S rRNA methyltransferase | — | — |
Not shown: 0 genomes with orthologs for ECD_01084 only; 49 genomes with orthologs for ECD_02409 only