| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BL21 | 1.0 | ECD_00078 | | global transcription factor | 1.0 | ECD_01220 | | oligopeptide ABC transporter ATPase | low | > 61 |
| Escherichia coli BW25113 | 1.00 | b0076 | leuO | probable transcriptional activator for leuABCD operon (VIMSS) | 1.00 | b1246 | oppD | oligopeptide transporter ATP-binding component (NCBI) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_03582 | | HTH-type transcriptional regulator LeuO | 1.00 | OHPLBJKB_02437 | | Oligopeptide transport ATP-binding protein OppD | low | > 73 |
| Escherichia coli ECRC62 | 1.00 | BNILDI_08560 | leuO | transcriptional regulator LeuO | 1.00 | BNILDI_18550 | oppD | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | low | > 75 |
| Escherichia coli ECRC100 | 0.99 | OKFHMN_10705 | leuO | transcriptional regulator LeuO | 1.00 | OKFHMN_28645 | oppD | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | low | > 80 |
| Escherichia coli ECRC102 | 0.99 | NIAGMN_08555 | leuO | transcriptional regulator LeuO | 1.00 | NIAGMN_27590 | oppD | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | — | — |
| Escherichia coli ECRC98 | 0.99 | JDDGAC_14300 | leuO | transcriptional regulator LeuO | 1.00 | JDDGAC_05930 | oppD | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | low | > 86 |
| Escherichia fergusonii Becca | 0.99 | EFB2_03970 | | HTH-type transcriptional regulator LeuO | 1.00 | EFB2_02679 | | Oligopeptide transport ATP-binding protein OppD | low | > 86 |
| Escherichia coli ECOR27 | 0.99 | NOLOHH_03050 | leuO | transcriptional regulator LeuO | 1.00 | NOLOHH_20405 | oppD | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | low | > 75 |
| Escherichia coli ECRC101 | 0.99 | MCAODC_01220 | leuO | transcriptional regulator LeuO | 1.00 | MCAODC_21615 | oppD | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | low | > 87 |
| Escherichia coli Nissle 1917 | 0.99 | ECOLIN_RS00410 | | transcriptional regulator LeuO | 1.00 | ECOLIN_RS07525 | | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | — | — |
| Escherichia coli ECRC99 | 0.99 | KEDOAH_17450 | leuO | transcriptional regulator LeuO | 1.00 | KEDOAH_25640 | oppD | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | — | — |
| Escherichia coli ECOR38 | 0.99 | HEPCGN_08685 | leuO | transcriptional regulator LeuO | 0.99 | HEPCGN_25110 | oppD | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | low | > 87 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.89 | GFF162 | | Probable transcriptional activator for leuABCD operon | 0.92 | GFF2743 | | Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) | low | > 78 |
| Enterobacter asburiae PDN3 | 0.83 | EX28DRAFT_3672 | | Transcriptional regulator | 0.93 | EX28DRAFT_0871 | | oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain | low | > 76 |
| Klebsiella michiganensis M5al | 0.82 | BWI76_RS04690 | | transcriptional regulator LeuO | 0.93 | BWI76_RS17225 | | oligopeptide ABC transporter ATP-binding protein OppD | low | > 92 |
| Enterobacter sp. TBS_079 | 0.81 | MPMX20_00770 | | HTH-type transcriptional regulator LeuO | 0.93 | MPMX20_02584 | | Oligopeptide transport ATP-binding protein OppD | low | > 85 |
| Serratia liquefaciens MT49 | 0.56 | IAI46_03365 | | transcriptional regulator LeuO | 0.89 | IAI46_14190 | | ABC transporter ATP-binding protein | low | > 86 |
| Rahnella sp. WP5 | 0.55 | EX31_RS03675 | | transcriptional regulator LeuO | 0.88 | EX31_RS10050 | | ABC transporter ATP-binding protein | low | > 89 |
| Vibrio cholerae E7946 ATCC 55056 | 0.48 | CSW01_12575 | | transcriptional regulator LeuO | 0.75 | CSW01_05560 | | ABC transporter ATP-binding protein | low | > 62 |
| Variovorax sp. OAS795 | 0.22 | ABID97_RS26910 | | LysR family transcriptional regulator | 0.42 | ABID97_RS22875 | | ABC transporter ATP-binding protein | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.21 | Pf6N2E2_2187 | | Transcriptional regulator, LysR family | 0.40 | Pf6N2E2_1812 | | peptide ABC transporter, ATP-binding protein | low | > 103 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.21 | Psyr_2473 | | transcriptional regulator, LysR family | 0.45 | Psyr_2540 | | Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.21 | Psyr_2473 | | transcriptional regulator, LysR family | 0.45 | Psyr_2540 | | Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal | low | > 86 |
| Pseudomonas fluorescens FW300-N1B4 | 0.21 | Pf1N1B4_3992 | | Transcriptional regulator, LysR family | 0.40 | Pf1N1B4_5104 | | Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) | — | — |
| Pseudomonas fluorescens SBW25 | 0.21 | PFLU_RS18945 | | LysR family transcriptional regulator | 0.40 | PFLU_RS08045 | | ABC transporter ATP-binding protein | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.21 | PFLU_RS18945 | | LysR family transcriptional regulator | 0.40 | PFLU_RS08045 | | ABC transporter ATP-binding protein | low | > 109 |
| Pseudomonas simiae WCS417 | 0.21 | PS417_16995 | | LysR family transcriptional regulator | 0.42 | PS417_08075 | | methionine ABC transporter ATP-binding protein | low | > 88 |
| Marinobacter adhaerens HP15 | 0.20 | HP15_1665 | | transcriptional regulator, LysR family | 0.45 | HP15_203 | | oligopeptide/dipeptide ABC transporter, ATPase subunit | low | > 73 |
| Ralstonia solanacearum PSI07 | 0.20 | RPSI07_RS14540 | | LysR family transcriptional regulator | 0.46 | RPSI07_RS15010 | | ABC transporter ATP-binding protein | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.20 | RS_RS10140 | | LysR family transcriptional regulator | 0.46 | RS_RS09515 | | ABC transporter ATP-binding protein | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.20 | RR42_RS30005 | | LysR family transcriptional regulator | 0.45 | RR42_RS35220 | | peptide ABC transporter ATP-binding protein | low | > 128 |
| Ralstonia sp. UNC404CL21Col | 0.20 | ABZR87_RS14695 | | LysR family transcriptional regulator | 0.47 | ABZR87_RS14290 | | ABC transporter ATP-binding protein | low | > 80 |
| Herbaspirillum seropedicae SmR1 | 0.20 | HSERO_RS24025 | | LysR family transcriptional regulator | 0.42 | HSERO_RS07880 | | peptide ABC transporter substrate-binding protein | — | — |
| Ralstonia solanacearum UW163 | 0.19 | UW163_RS10955 | | LysR family transcriptional regulator | 0.47 | UW163_RS11365 | | ABC transporter ATP-binding protein | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.19 | RALBFv3_RS02770 | | LysR family transcriptional regulator | 0.47 | RALBFv3_RS02360 | | ABC transporter ATP-binding protein | low | > 76 |
| Paraburkholderia sabiae LMG 24235 | 0.19 | QEN71_RS33090 | | LysR family transcriptional regulator | 0.52 | QEN71_RS18345 | | ABC transporter ATP-binding protein | low | > 153 |
| Agrobacterium fabrum C58 | 0.19 | Atu5084 | | LysR family transcriptional regulator | 0.46 | Atu5256 | | ABC transporter nucleotide binding/ATPase (oligopeptide) | — | — |
| Rhizobium sp. OAE497 | 0.19 | ABIE40_RS05450 | | LysR family transcriptional regulator | 0.51 | ABIE40_RS13580 | | ABC transporter ATP-binding protein | low | > 107 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.19 | H281DRAFT_03847 | | transcriptional regulator, LysR family | 0.52 | H281DRAFT_03126 | | oligopeptide transport system ATP-binding protein | low | > 103 |
| Sinorhizobium meliloti 1021 | 0.19 | SMa0307 | | LysR family transcriptional regulator | 0.44 | SMc03125 | | transport system ATP-binding ABC transporter protein | — | — |
| Bosea sp. OAE506 | 0.18 | ABIE41_RS06780 | | LysR family transcriptional regulator | 0.45 | ABIE41_RS02275 | | ABC transporter ATP-binding protein | low | > 77 |
| Paraburkholderia graminis OAS925 | 0.18 | ABIE53_004542 | | DNA-binding transcriptional LysR family regulator | 0.50 | ABIE53_004172 | | oligopeptide transport system ATP-binding protein | low | > 113 |
| Burkholderia phytofirmans PsJN | 0.18 | BPHYT_RS30310 | | LysR family transcriptional regulator | 0.52 | BPHYT_RS22035 | | peptide ABC transporter ATP-binding protein | — | — |
| Pantoea sp. MT58 | 0.17 | IAI47_19555 | | LysR family transcriptional regulator | 0.87 | IAI47_09085 | | ABC transporter ATP-binding protein | low | > 76 |
| Azospirillum brasilense Sp245 | 0.17 | AZOBR_RS27530 | | LysR family transcriptional regulator | 0.43 | AZOBR_RS23930 | | methionine ABC transporter ATP-binding protein | low | > 97 |
| Dickeya dadantii 3937 | 0.15 | DDA3937_RS21355 | | LysR family transcriptional regulator | 0.84 | DDA3937_RS10390 | | ABC transporter ATP-binding protein | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.13 | HER17_RS04190 | | LysR family transcriptional regulator | 0.86 | HER17_RS11005 | | ABC transporter ATP-binding protein | low | > 75 |
| Rhodopseudomonas palustris CGA009 | 0.12 | TX73_009285 | | LysR family transcriptional regulator | 0.42 | TX73_003900 | | ABC transporter ATP-binding protein | low | > 86 |
| Dinoroseobacter shibae DFL-12 | 0.09 | Dshi_2347 | | transcriptional regulator, LysR family (RefSeq) | 0.40 | Dshi_0884 | | oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq) | low | > 64 |