Conservation of cofitness between CSW01_05355 and CSW01_19130 in Vibrio cholerae E7946 ATCC 55056

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05355 DUF454 domain-containing protein 1.0 CSW01_19130 FAA hydrolase family protein 0.45 8
Klebsiella pneumoniae MKP103 0.41 KDGMDA_14870 DUF454 domain-containing protein 0.28 KDGMDA_25085 fumarylacetoacetate hydrolase family protein low > 95
Shewanella amazonensis SB2B 0.41 Sama_1308 hypothetical protein (RefSeq) 0.50 Sama_1093 fumarylacetoacetate (FAA) hydrolase (RefSeq) low > 62
Escherichia coli ECOR27 0.40 NOLOHH_01105 ybaN DUF454 domain-containing protein 0.29 NOLOHH_20780 ycgM fumarylacetoacetate hydrolase family protein low > 76
Escherichia coli ECRC102 0.40 NIAGMN_06230 ybaN DUF454 domain-containing protein 0.29 NIAGMN_27980 ycgM fumarylacetoacetate hydrolase family protein low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_03206 Inner membrane protein YbaN 0.29 OHPLBJKB_02511 putative protein YcgM low > 74
Escherichia coli BW25113 0.40 b0468 ybaN conserved inner membrane protein (NCBI) 0.29 b1180 ycgM predicted isomerase/hydrolase (NCBI) low > 76
Escherichia coli ECRC100 0.40 OKFHMN_08175 ybaN DUF454 domain-containing protein 0.29 OKFHMN_28240 ycgM fumarylacetoacetate hydrolase family protein low > 79
Escherichia coli ECOR38 0.40 HEPCGN_06790 ybaN DUF454 domain-containing protein 0.29 HEPCGN_24690 ycgM fumarylacetoacetate hydrolase family protein low > 88
Escherichia coli ECRC99 0.40 KEDOAH_19790 ybaN DUF454 domain-containing protein 0.29 KEDOAH_25255 ycgM fumarylacetoacetate hydrolase family protein — —
Escherichia coli ECRC62 0.40 BNILDI_22525 ybaN DUF454 domain-containing protein 0.29 BNILDI_18940 ycgM fumarylacetoacetate hydrolase family protein low > 75
Escherichia coli BL21 0.40 ECD_00419 DUF454 family inner membrane protein 0.29 ECD_01155 putative isomerase/hydrolase low > 61
Escherichia coli ECRC98 0.40 JDDGAC_11825 ybaN DUF454 domain-containing protein 0.29 JDDGAC_06270 ycgM fumarylacetoacetate hydrolase family protein low > 87
Escherichia coli ECRC101 0.39 MCAODC_27400 ybaN DUF454 domain-containing protein 0.29 MCAODC_21930 ycgM fumarylacetoacetate hydrolase family protein low > 87
Klebsiella michiganensis M5al 0.39 BWI76_RS06810 hypothetical protein 0.27 BWI76_RS17770 isomerase/hydrolase low > 92
Escherichia coli Nissle 1917 0.39 ECOLIN_RS02785 DUF454 family protein 0.29 ECOLIN_RS07140 fumarylacetoacetate hydrolase family protein — —
Escherichia fergusonii Becca 0.39 EFB2_03590 Inner membrane protein YbaN 0.29 EFB2_02751 putative protein YcgM low > 86
Enterobacter asburiae PDN3 0.38 EX28DRAFT_2490 Uncharacterized protein conserved in bacteria 0.29 EX28DRAFT_0760 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) low > 76
Enterobacter sp. TBS_079 0.37 MPMX20_01070 Inner membrane protein YbaN 0.28 MPMX20_02705 putative protein YcgM low > 85
Pseudomonas sp. DMC3 0.36 GFF2378 Inner membrane protein YbaN 0.32 GFF272 putative protein YcgM low > 89
Shewanella oneidensis MR-1 0.36 SO2011 conserved hypothetical protein (NCBI ptt file) 0.51 SO1585 fumarylacetoacetate hydrolase family protein (NCBI ptt file) low > 76
Pseudomonas syringae pv. syringae B728a ΔmexB 0.36 Psyr_3740 Protein of unknown function DUF454 0.34 Psyr_4850 Fumarylacetoacetate (FAA) hydrolase low > 86
Pseudomonas syringae pv. syringae B728a 0.36 Psyr_3740 Protein of unknown function DUF454 0.34 Psyr_4850 Fumarylacetoacetate (FAA) hydrolase low > 86
Pseudomonas orientalis W4I3 0.35 QF045_RS22080 YbaN family protein 0.34 QF045_RS01420 fumarylacetoacetate hydrolase family protein low > 93
Pseudomonas fluorescens SBW25 0.35 PFLU_RS21930 DUF454 domain-containing protein 0.33 PFLU_RS28685 fumarylacetoacetate hydrolase family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS21930 DUF454 domain-containing protein 0.33 PFLU_RS28685 fumarylacetoacetate hydrolase family protein low > 109
Pseudomonas simiae WCS417 0.35 PS417_19960 membrane protein 0.33 PS417_27030 hypothetical protein — —
Pseudomonas lactucae CFBP13502 0.35 GEMAOFIL_04189 Inner membrane protein YbaN 0.34 GEMAOFIL_05546 putative protein YcgM low > 96
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.35 GFF4386 FIG039061: hypothetical protein related to heme utilization 0.28 GFF2814 FIG094199: Fumarylacetoacetate hydrolase low > 78
Pantoea sp. MT58 0.34 IAI47_14485 DUF454 family protein 0.29 IAI47_08865 fumarylacetoacetate hydrolase family protein low > 76
Pseudomonas segetis P6 0.34 MPMX49_02938 Inner membrane protein YbaN 0.32 MPMX49_00577 putative protein YcgM 0.41 36
Pantoea agglomerans CFBP13505 P0401 0.34 PagCFBP13505_RS10710 DUF454 family protein 0.29 PagCFBP13505_RS02700 fumarylacetoacetate hydrolase family protein low > 74
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_04060 hypothetical protein 0.32 AO356_10310 hypothetical protein low > 104
Pseudomonas stutzeri RCH2 0.34 Psest_1866 Uncharacterized protein conserved in bacteria 0.33 Psest_3871 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) low > 67
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_18420 hypothetical protein 0.33 AO353_08500 hypothetical protein low > 101
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_4425 FIG039061: hypothetical protein related to heme utilization 0.33 PfGW456L13_945 Fumarylacetoacetate hydrolase family protein low > 87
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_2647 FIG039061: hypothetical protein related to heme utilization 0.33 Pf6N2E2_3934 Fumarylacetoacetate hydrolase family protein low > 103
Pseudomonas sp. BP01 0.33 JOY50_RS01165 YbaN family protein 0.32 JOY50_RS20625 fumarylacetoacetate hydrolase family protein low > 84
Pseudomonas sp. SVBP6 0.33 COO64_RS21855 YbaN family protein 0.33 COO64_RS12650 fumarylacetoacetate hydrolase family protein low > 93
Hydrogenophaga sp. GW460-11-11-14-LB1 0.33 GFF2586 FIG039061: hypothetical protein related to heme utilization 0.21 GFF2587 Fumarylacetoacetate hydrolase family protein low > 90
Pseudomonas aeruginosa MRSN321 0.33 DY961_RS05715 YbaN family protein 0.33 DY961_RS21545 fumarylacetoacetate hydrolase family protein low > 100
Pseudomonas aeruginosa PUPa3 0.33 DQ20_RS47075 YbaN family protein 0.33 DQ20_RS37745 fumarylacetoacetate hydrolase family protein low > 101
Pseudomonas aeruginosa PA14 0.33 IKLFDK_06840 DUF454 domain-containing protein 0.33 IKLFDK_23850 fumarylacetoacetate hydrolase family protein low > 98
Pseudomonas fluorescens FW300-N1B4 0.33 Pf1N1B4_3531 FIG039061: hypothetical protein related to heme utilization 0.32 Pf1N1B4_2275 Fumarylacetoacetate hydrolase family protein low > 87
Pseudomonas sp. RS175 0.32 PFR28_00786 Inner membrane protein YbaN 0.33 PFR28_04840 putative protein YcgM low > 88
Pseudomonas putida KT2440 0.32 PP_4518 conserved protein of unknown function 0.32 PP_5153 putative isomerase/hydrolase low > 96
Pseudomonas sp. S08-1 0.31 OH686_20660 Inner membrane protein YbaN 0.31 OH686_11290 Fumarylacetoacetate hydrolase family protein low > 80
Herbaspirillum seropedicae SmR1 0.30 HSERO_RS22710 hypothetical protein 0.22 HSERO_RS17860 5-carboxymethyl-2-hydroxymuconate isomerase low > 78
Shewanella loihica PV-4 0.30 Shew_2237 hypothetical protein (RefSeq) 0.55 Shew_1535 fumarylacetoacetate (FAA) hydrolase (RefSeq) low > 60
Serratia liquefaciens MT49 0.29 IAI46_05220 DUF454 family protein 0.27 IAI46_14500 fumarylacetoacetate hydrolase family protein low > 87
Rahnella sp. WP5 0.29 EX31_RS22500 DUF454 family protein 0.27 EX31_RS10565 fumarylacetoacetate hydrolase family protein low > 89
Shewanella sp. ANA-3 0.28 Shewana3_2448 hypothetical protein (RefSeq) 0.50 Shewana3_2857 fumarylacetoacetate (FAA) hydrolase (RefSeq) low > 73
Lysobacter sp. OAE881 0.28 ABIE51_RS03015 YbaN family protein 0.25 ABIE51_RS16580 fumarylacetoacetate hydrolase family protein low > 62
Pectobacterium carotovorum WPP14 0.27 HER17_RS15715 DUF454 family protein 0.28 HER17_RS11245 fumarylacetoacetate hydrolase family protein low > 75
Erwinia amylovora T8 0.27 OLJFJH_17825 DUF454 domain-containing protein 0.30 OLJFJH_13135 fumarylacetoacetate hydrolase family protein low > 58
Dickeya dianthicola ME23 0.27 DZA65_RS06145 DUF454 family protein 0.26 DZA65_RS11575 fumarylacetoacetate hydrolase family protein low > 75
Dickeya dianthicola 67-19 0.26 HGI48_RS05820 DUF454 family protein 0.26 HGI48_RS11230 fumarylacetoacetate hydrolase family protein — —
Phocaeicola dorei CL03T12C01 0.26 ABI39_RS22025 YbaN family protein 0.28 ABI39_RS08095 fumarylacetoacetate hydrolase family protein low > 72
Dickeya dadantii 3937 0.25 DDA3937_RS05770 DUF454 family protein 0.27 DDA3937_RS11195 fumarylacetoacetate hydrolase family protein low > 74
Phocaeicola vulgatus CL09T03C04 0.25 HMPREF1058_RS20500 YbaN family protein 0.28 HMPREF1058_RS00475 fumarylacetoacetate hydrolase family protein low > 67
Castellaniella sp019104865 MT123 0.24 ABCV34_RS06460 YbaN family protein 0.24 ABCV34_RS04400 fumarylacetoacetate hydrolase family protein low > 48
Azospirillum sp. SherDot2 0.21 MPMX19_06198 hypothetical protein 0.23 MPMX19_00039 Fumarylpyruvate hydrolase low > 112

Not shown: 1 genomes with orthologs for CSW01_05355 only; 52 genomes with orthologs for CSW01_19130 only