Conservation of cofitness between CSW01_00470 and CSW01_18635 in Vibrio cholerae E7946 ATCC 55056

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00470 twin-arginine translocase subunit TatC 1.0 CSW01_18635 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) 0.85 14
Dickeya dadantii 3937 0.75 DDA3937_RS20305 Sec-independent protein translocase subunit TatC 0.52 DDA3937_RS06805 NADP-dependent phosphogluconate dehydrogenase low > 74
Dickeya dianthicola ME23 0.74 DZA65_RS00980 Sec-independent protein translocase subunit TatC 0.53 DZA65_RS07180 NADP-dependent phosphogluconate dehydrogenase low > 75
Klebsiella michiganensis M5al 0.73 BWI76_RS01330 twin-arginine translocase subunit TatC 0.52 BWI76_RS19025 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) low > 92
Rahnella sp. WP5 0.73 EX31_RS14600 Sec-independent protein translocase subunit TatC 0.52 EX31_RS11475 NADP-dependent phosphogluconate dehydrogenase
Erwinia amylovora T8 0.72 OLJFJH_06525 Sec-independent protein translocase subunit TatC 0.51 OLJFJH_12140 NADP-dependent phosphogluconate dehydrogenase
Serratia liquefaciens MT49 0.72 IAI46_01090 Sec-independent protein translocase subunit TatC 0.52 IAI46_08160 NADP-dependent phosphogluconate dehydrogenase low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF265 Twin-arginine translocation protein TatC 0.51 GFF3903 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) low > 78
Pectobacterium carotovorum WPP14 0.72 HER17_RS20585 Sec-independent protein translocase subunit TatC 0.52 HER17_RS14505 NADP-dependent phosphogluconate dehydrogenase low > 75
Escherichia coli ECRC98 0.72 JDDGAC_17900 tatC Sec-independent protein translocase subunit TatC 0.52 JDDGAC_28580 gndA NADP-dependent phosphogluconate dehydrogenase low > 87
Escherichia coli ECOR38 0.72 HEPCGN_12905 tatC Sec-independent protein translocase subunit TatC 0.52 HEPCGN_03175 gndA NADP-dependent phosphogluconate dehydrogenase
Escherichia coli BW25113 0.72 b3839 tatC TatABCE protein translocation system subunit (NCBI) 0.52 b2029 gnd 6-phosphogluconate dehydrogenase (NCBI) low > 76
Escherichia coli ECRC101 0.72 MCAODC_04780 tatC Sec-independent protein translocase subunit TatC 0.52 MCAODC_20470 gndA NADP-dependent phosphogluconate dehydrogenase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_04213 Sec-independent protein translocase protein TatC 0.52 OHPLBJKB_01659 6-phosphogluconate dehydrogenase, decarboxylating 0.66 38
Escherichia coli ECRC62 0.72 BNILDI_05125 tatC Sec-independent protein translocase subunit TatC 0.52 BNILDI_14695 gndA NADP-dependent phosphogluconate dehydrogenase low > 75
Escherichia coli ECRC99 0.72 KEDOAH_13875 tatC Sec-independent protein translocase subunit TatC 0.52 KEDOAH_03680 gndA NADP-dependent phosphogluconate dehydrogenase
Escherichia coli BL21 0.72 ECD_03731 TatABCE protein translocation system subunit 0.52 ECD_01931 6-phosphogluconate dehydrogenase, decarboxylating low > 61
Escherichia coli ECRC100 0.72 OKFHMN_14275 tatC Sec-independent protein translocase subunit TatC 0.52 OKFHMN_24470 gndA NADP-dependent phosphogluconate dehydrogenase low > 79
Klebsiella pneumoniae MKP103 0.72 KDGMDA_09825 Sec-independent protein translocase subunit TatC 0.52 KDGMDA_26195 NADP-dependent phosphogluconate dehydrogenase low > 95
Escherichia coli ECOR27 0.72 NOLOHH_06405 tatC Sec-independent protein translocase subunit TatC 0.52 NOLOHH_15785 gndA NADP-dependent phosphogluconate dehydrogenase low > 76
Escherichia coli ECRC102 0.72 NIAGMN_12030 tatC Sec-independent protein translocase subunit TatC 0.52 NIAGMN_22415 gndA NADP-dependent phosphogluconate dehydrogenase low > 80
Pantoea sp. MT58 0.71 IAI47_18260 Sec-independent protein translocase subunit TatC 0.50 IAI47_07035 NADP-dependent phosphogluconate dehydrogenase
Escherichia fergusonii Becca 0.71 EFB2_04777 Sec-independent protein translocase protein TatC 0.52 EFB2_01826 6-phosphogluconate dehydrogenase, decarboxylating low > 86
Dickeya dianthicola 67-19 0.71 HGI48_RS00920 Sec-independent protein translocase subunit TatC 0.52 HGI48_RS06840 NADP-dependent phosphogluconate dehydrogenase low > 71
Escherichia coli Nissle 1917 0.71 ECOLIN_RS22140 Sec-independent protein translocase subunit TatC 0.52 ECOLIN_RS11990 NADP-dependent phosphogluconate dehydrogenase low > 55
Erwinia tracheiphila HP pepo 2.2 0.71 IJEDHG_08625 tatC Sec-independent protein translocase subunit TatC 0.50 IJEDHG_19020 gndA NADP-dependent phosphogluconate dehydrogenase
Erwinia tracheiphila SCR3 0.71 LU632_RS23980 tatC Sec-independent protein translocase subunit TatC 0.50 LU632_RS08890 gndA NADP-dependent phosphogluconate dehydrogenase low > 73
Pantoea agglomerans CFBP13505 P0401 0.71 PagCFBP13505_RS15240 Sec-independent protein translocase subunit TatC 0.50 PagCFBP13505_RS01160 NADP-dependent phosphogluconate dehydrogenase
Enterobacter sp. TBS_079 0.70 MPMX20_04442 Sec-independent protein translocase protein TatC 0.51 MPMX20_03014 6-phosphogluconate dehydrogenase, decarboxylating low > 85
Enterobacter asburiae PDN3 0.70 EX28DRAFT_4503 Twin arginine targeting (Tat) protein translocase TatC 0.51 EX28DRAFT_0529 6-phosphogluconate dehydrogenase (decarboxylating) low > 76
Shewanella loihica PV-4 0.70 Shew_3378 Sec-independent protein translocase, TatC subunit (RefSeq) 0.42 Shew_2561 6-phosphogluconate dehydrogenase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.70 SO4204 tatC Sec-independent periplasmic protein translocation protein TatC (NCBI ptt file) 0.40 SO1902 gnd 6-phosphogluconate dehydrogenase, decarboxylating (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.64 Shewana3_3730 Sec-independent protein translocase TatC (RefSeq) 0.42 Shewana3_1677 6-phosphogluconate dehydrogenase (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.64 MIT1002_00508 Sec-independent protein translocase protein TatC 0.42 MIT1002_02397 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating
Shewanella amazonensis SB2B 0.62 Sama_3207 Sec-independent periplasmic protein translocation protein TatC (RefSeq) 0.43 Sama_1365 6-phosphogluconate dehydrogenase (RefSeq) low > 62
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS27800 twin-arginine translocase subunit TatC 0.53 QEN71_RS20525 NADP-dependent phosphogluconate dehydrogenase
Paraburkholderia graminis OAS925 0.50 ABIE53_003688 sec-independent protein translocase protein TatC 0.51 ABIE53_005122 6-phosphogluconate dehydrogenase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_05666 Sec-independent protein translocase TatC 0.52 H281DRAFT_03046 6-phosphogluconate dehydrogenase (decarboxylating)
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS13370 twin-arginine translocase subunit TatC 0.52 ABZR86_RS13330 NADP-dependent phosphogluconate dehydrogenase low > 74
Methylophilus sp. DMC18 0.48 GFF1574 Sec-independent protein translocase protein TatC 0.48 GFF2795 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS17645 twin-arginine protein translocation system subunit TatC 0.50 BPHYT_RS29625 6-phosphogluconate dehydrogenase
Azospirillum brasilense Sp245 0.39 AZOBR_RS15480 preprotein translocase subunit TatC 0.41 AZOBR_RS15725 6-phosphogluconate dehydrogenase
Variovorax sp. OAS795 0.39 ABID97_RS23070 twin-arginine translocase subunit TatC 0.51 ABID97_RS10190 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase
Variovorax sp. SCN45 0.37 GFF5364 Twin-arginine translocation protein TatC 0.51 GFF2954 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
Sinorhizobium meliloti 1021 0.33 SMc02065 SEC-independent translocase transmembrane protein 0.41 SMc04262 6-phosphogluconate dehydrogenase
Rhizobium sp. OAE497 0.33 ABIE40_RS08470 twin-arginine translocase subunit TatC 0.43 ABIE40_RS11035 NADP-dependent phosphogluconate dehydrogenase
Agrobacterium fabrum C58 0.31 Atu1704 SEC-independent protein translocase protein 0.42 Atu1526 6-phosphogluconate dehydrogenase, decarboxylating
Synechocystis sp000284455 PCC 6803 0.24 SGL_RS13635 twin-arginine translocase subunit TatC 0.48 SGL_RS12985 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase
Cellulophaga baltica 18 0.24 M666_RS10580 twin-arginine translocase subunit TatC 0.42 M666_RS18130 NADP-dependent phosphogluconate dehydrogenase
Phocaeicola dorei CL03T12C01 0.23 ABI39_RS18845 twin-arginine translocase subunit TatC 0.51 ABI39_RS14350 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase low > 72
Phocaeicola vulgatus CL09T03C04 0.23 HMPREF1058_RS05020 twin-arginine translocase subunit TatC 0.50 HMPREF1058_RS18025 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase low > 67
Mycobacterium tuberculosis H37Rv 0.23 Rv2093c Sec-independent protein translocase transmembrane protein TatC 0.48 Rv1844c Probable 6-phosphogluconate dehydrogenase Gnd1
Synechococcus elongatus PCC 7942 0.23 Synpcc7942_1578 tatC Sec-independent protein translocase TatC 0.48 Synpcc7942_0039 gnd 6-phosphogluconate dehydrogenase
Pedobacter sp. GW460-11-11-14-LB5 0.23 CA265_RS18375 twin-arginine translocase subunit TatC 0.42 CA265_RS09805 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)
Echinicola vietnamensis KMM 6221, DSM 17526 0.22 Echvi_1187 Twin arginine targeting (Tat) protein translocase TatC 0.65 Echvi_4222 6-phosphogluconate dehydrogenase, decarboxylating
Mucilaginibacter yixingensis YX-36 DSM 26809 0.21 ABZR88_RS00175 twin-arginine translocase subunit TatC 0.44 ABZR88_RS02970 NADP-dependent phosphogluconate dehydrogenase
Parabacteroides merdae CL09T00C40 0.20 HMPREF1078_RS03715 twin-arginine translocase subunit TatC 0.58 HMPREF1078_RS08640 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase low > 61
Bacteroides ovatus ATCC 8483 0.20 BACOVA_04894 twin arginine-targeting protein translocase TatC 0.52 BACOVA_00509 phosphogluconate dehydrogenase (decarboxylating) low > 96

Not shown: 59 genomes with orthologs for CSW01_00470 only; 3 genomes with orthologs for CSW01_18635 only