Conservation of cofitness between CSW01_07070 and CSW01_16995 in Vibrio cholerae E7946 ATCC 55056

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07070 HlyD family secretion protein 1.0 CSW01_16995 MFS transporter 0.48 6
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS16350 hemolysin D 0.10 HSERO_RS07415 MFS transporter low > 78
Ralstonia solanacearum GMI1000 0.49 RS_RS09360 HlyD family secretion protein 0.11 RS_RS22185 MFS transporter low > 80
Sphingobium sp. HT1-2 0.47 GFF3800 Multidrug efflux system EmrAB-OMF, membrane fusion component EmrA 0.09 GFF4058 Uncharacterized MFS-type transporter low > 95
Enterobacter asburiae PDN3 0.46 EX28DRAFT_2614 Multidrug resistance efflux pump 0.19 EX28DRAFT_3807 oxalate/formate antiporter family transporter low > 76
Acinetobacter radioresistens SK82 0.40 MPMX26_02395 putative multidrug resistance protein EmrK 0.07 MPMX26_02115 L-lactate transporter low > 36
Castellaniella sp019104865 MT123 0.36 ABCV34_RS05945 HlyD family efflux transporter periplasmic adaptor subunit 0.13 ABCV34_RS00230 OFA family MFS transporter low > 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.34 GFF3756 Membrane fusion component of tripartite multidrug resistance system 0.09 GFF2749 Probable oxalate/formate antiporter low > 90
Pseudomonas putida KT2440 0.34 PP_3549 multidrug efflux transport system - membrane fusion protein 0.10 PP_0288 putative Oxalate/formate antiporter low > 96
Dickeya dadantii 3937 0.34 DDA3937_RS07310 efflux RND transporter periplasmic adaptor subunit 0.18 DDA3937_RS09140 OFA family MFS transporter low > 74
Dickeya dianthicola ME23 0.34 DZA65_RS08725 HlyD family efflux transporter periplasmic adaptor subunit 0.17 DZA65_RS09480 OFA family MFS transporter low > 75
Pseudomonas sp. BP01 0.34 JOY50_RS28125 HlyD family efflux transporter periplasmic adaptor subunit 0.10 JOY50_RS25495 OFA family MFS transporter low > 84
Pectobacterium carotovorum WPP14 0.33 HER17_RS04465 multidrug efflux MFS transporter periplasmic adaptor subunit EmrA 0.20 HER17_RS11560 OFA family MFS transporter low > 75
Pseudomonas sp. SVBP6 0.33 COO64_RS09950 HlyD family efflux transporter periplasmic adaptor subunit 0.11 COO64_RS00235 OFA family MFS transporter low > 93
Escherichia coli ECOR38 0.33 HEPCGN_21645 emrK multidrug efflux MFS transporter periplasmic adaptor subunit EmrK 0.19 HEPCGN_14940 yhjX Uncharacterized MFS-type transporter YhjX low > 88
Pseudomonas fluorescens FW300-N1B4 0.33 Pf1N1B4_4001 Membrane fusion component of tripartite multidrug resistance system 0.11 Pf1N1B4_1628 MFS permease low > 87
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_148 Membrane fusion component of tripartite multidrug resistance system 0.11 Pf6N2E2_3843 MFS permease low > 103
Dickeya dianthicola 67-19 0.33 HGI48_RS08130 efflux RND transporter periplasmic adaptor subunit 0.17 HGI48_RS09180 OFA family MFS transporter low > 71
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_01353 putative multidrug resistance protein EmrK 0.18 OHPLBJKB_00159 putative MFS-type transporter YhjX low > 74
Escherichia fergusonii Becca 0.33 EFB2_01506 putative multidrug resistance protein EmrK 0.19 EFB2_00260 putative MFS-type transporter YhjX low > 86
Escherichia coli BW25113 0.33 b2368 emrK EmrKY-TolC multidrug resistance efflux pump, membrane fusion protein component (NCBI) 0.18 b3547 yhjX predicted transporter (NCBI) low > 76
Escherichia coli Nissle 1917 0.33 ECOLIN_RS13630 multidrug efflux MFS transporter periplasmic adaptor subunit EmrK 0.19 ECOLIN_RS20300 MFS transporter — —
Escherichia coli BL21 0.33 ECD_02278 multidrug resistance efflux pump membrane fusion protein 0.19 ECD_03397 pyruvate-inducible inner membrane protein, putative transporter low > 61
Escherichia coli ECRC99 0.33 KEDOAH_05785 emrK multidrug efflux MFS transporter periplasmic adaptor subunit EmrK 0.19 KEDOAH_12100 yhjX Uncharacterized MFS-type transporter YhjX — —
Escherichia coli ECRC98 0.33 JDDGAC_26400 emrK multidrug efflux MFS transporter periplasmic adaptor subunit EmrK 0.19 JDDGAC_19680 yhjX Uncharacterized MFS-type transporter YhjX low > 87
Escherichia coli ECRC100 0.33 OKFHMN_22440 emrK multidrug efflux MFS transporter periplasmic adaptor subunit EmrK 0.19 OKFHMN_16050 yhjX Uncharacterized MFS-type transporter YhjX low > 79
Escherichia coli ECRC101 0.33 MCAODC_12970 emrK multidrug efflux MFS transporter periplasmic adaptor subunit EmrK 0.19 MCAODC_06565 yhjX Uncharacterized MFS-type transporter YhjX low > 87
Escherichia coli ECOR27 0.33 NOLOHH_14120 emrK multidrug efflux MFS transporter periplasmic adaptor subunit EmrK 0.18 NOLOHH_07995 yhjX Uncharacterized MFS-type transporter YhjX low > 76
Pseudomonas sp. DMC3 0.33 GFF1487 Multidrug export protein EmrA 0.11 GFF4100 hypothetical protein low > 89
Pseudomonas sp. RS175 0.33 PFR28_02748 Multidrug export protein EmrA 0.11 PFR28_04928 hypothetical protein low > 88
Escherichia coli ECRC102 0.33 NIAGMN_20215 emrK multidrug efflux MFS transporter periplasmic adaptor subunit EmrK 0.19 NIAGMN_13810 yhjX Uncharacterized MFS-type transporter YhjX low > 80
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_2605 Membrane fusion component of tripartite multidrug resistance system 0.11 PfGW456L13_363 MFS permease low > 87
Pseudomonas segetis P6 0.32 ACVTMO_RS11145 HlyD family secretion protein 0.07 ACVTMO_RS09080 MFS transporter low > 75
Escherichia coli ECRC62 0.32 BNILDI_12975 emrK multidrug efflux MFS transporter periplasmic adaptor subunit EmrK 0.18 BNILDI_03550 yhjX Uncharacterized MFS-type transporter YhjX low > 75
Pantoea agglomerans CFBP13505 P0401 0.32 PagCFBP13505_RS14495 multidrug efflux MFS transporter periplasmic adaptor subunit EmrA 0.18 PagCFBP13505_RS20170 OFA family MFS transporter low > 74
Pantoea sp. MT58 0.32 IAI47_04500 multidrug efflux MFS transporter periplasmic adaptor subunit EmrA 0.19 IAI47_05625 MFS transporter low > 76
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_27845 hemolysin D 0.11 AO353_12065 MFS transporter low > 101
Lysobacter sp. OAE881 0.32 ABIE51_RS07710 efflux RND transporter periplasmic adaptor subunit 0.08 ABIE51_RS11165 MFS transporter low > 62
Pseudomonas syringae pv. syringae B728a 0.32 Psyr_1730 Secretion protein HlyD 0.10 Psyr_4899 Major facilitator superfamily low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.32 Psyr_1730 Secretion protein HlyD 0.10 Psyr_4899 Major facilitator superfamily low > 86
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_01030 hemolysin D 0.11 AO356_09820 MFS transporter low > 104
Pseudomonas orientalis W4I3 0.31 QF045_RS18625 efflux RND transporter periplasmic adaptor subunit 0.11 QF045_RS04625 OFA family MFS transporter 0.35 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF1592 Multidrug resistance protein A 0.19 GFF2468 Putative transmembrane transport protein low > 78
Pseudomonas lactucae CFBP13502 0.31 GEMAOFIL_03698 Multidrug export protein EmrA 0.11 GEMAOFIL_00531 hypothetical protein low > 96
Rahnella sp. WP5 0.31 EX31_RS13655 multidrug efflux MFS transporter periplasmic adaptor subunit EmrA 0.19 EX31_RS20650 OFA family MFS transporter low > 89
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS18900 HlyD family efflux transporter periplasmic adaptor subunit 0.11 PFLU_RS01600 OFA family MFS transporter low > 109
Pseudomonas fluorescens SBW25 0.31 PFLU_RS18900 HlyD family efflux transporter periplasmic adaptor subunit 0.11 PFLU_RS01600 OFA family MFS transporter low > 109
Pseudomonas simiae WCS417 0.31 PS417_16915 hemolysin D 0.11 PS417_01555 MFS transporter low > 88
Serratia liquefaciens MT49 0.31 IAI46_20000 multidrug efflux MFS transporter periplasmic adaptor subunit EmrA 0.22 IAI46_18210 OFA family MFS transporter low > 87
Xanthomonas campestris pv. campestris strain 8004 0.31 Xcc-8004.3525.1 Membrane fusion component of tripartite multidrug resistance system 0.12 Xcc-8004.2193.1 MFS permease low > 74
Enterobacter sp. TBS_079 0.31 MPMX20_03563 Multidrug export protein EmrA 0.19 MPMX20_00187 putative MFS-type transporter YhjX low > 85
Klebsiella michiganensis M5al 0.31 BWI76_RS22095 multidrug export protein EmrA 0.18 BWI76_RS26905 oxalate/formate antiport family MFS transporter low > 92
Klebsiella pneumoniae MKP103 0.31 KDGMDA_02760 multidrug efflux MFS transporter periplasmic adaptor subunit EmrA 0.18 KDGMDA_07640 oxalate/formate antiport family MFS transporter low > 95
Rhodopseudomonas palustris CGA009 0.30 TX73_019155 efflux RND transporter periplasmic adaptor subunit 0.15 TX73_010020 oxalate/formate MFS antiporter low > 86
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS14770 HlyD family efflux transporter periplasmic adaptor subunit 0.07 ABZR86_RS15325 MFS transporter low > 74
Xanthobacter sp. DMC5 0.26 GFF2174 Colistin resistance protein EmrA 0.16 GFF3236 Oxalate:formate antiporter — —
Bosea sp. OAE506 0.24 ABIE41_RS08460 HlyD family secretion protein 0.09 ABIE41_RS12045 MFS transporter low > 77
Rhizobium sp. OAE497 0.22 ABIE40_RS16835 HlyD family secretion protein 0.11 ABIE40_RS03715 MFS transporter low > 107
Sinorhizobium meliloti 1021 0.22 SM_b20699 protein secretion protein 0.12 SM_b20272 transporter protein low > 103
Azospirillum sp. SherDot2 0.21 MPMX19_04288 Colistin resistance protein EmrA 0.15 MPMX19_01625 Oxalate:formate antiporter low > 112
Magnetospirillum magneticum AMB-1 0.21 AMB_RS20235 HlyD family secretion protein 0.07 AMB_RS14535 MFS transporter low > 64
Azospirillum brasilense Sp245 0.19 AZOBR_RS19970 multidrug transporter 0.16 AZOBR_RS07885 spermidine/putrescine ABC transporter substrate-binding protein low > 97
Pseudomonas sp. S08-1 0.19 OH686_04565 Membrane fusion component of MSF-type tripartite multidrug efflux system 0.08 OH686_04930 Uncharacterized MFS-type transporter low > 80
Sphingomonas koreensis DSMZ 15582 0.19 Ga0059261_4006 Multidrug resistance efflux pump 0.08 Ga0059261_4201 Arabinose efflux permease low > 68
Ralstonia solanacearum UW163 0.15 UW163_RS07875 HlyD family secretion protein 0.10 UW163_RS20365 MFS transporter — —

Not shown: 24 genomes with orthologs for CSW01_07070 only; 15 genomes with orthologs for CSW01_16995 only