Conservation of cofitness between CSW01_01380 and CSW01_14050 in Vibrio cholerae E7946 ATCC 55056

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01380 D-2-hydroxyacid dehydrogenase 1.0 CSW01_14050 ribosomal RNA small subunit methyltransferase G 0.69 17
Shewanella sp. ANA-3 0.40 Shewana3_0583 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) 0.59 Shewana3_0001 gidB 16S rRNA methyltransferase GidB (RefSeq) low > 73
Shewanella amazonensis SB2B 0.39 Sama_3039 Phosphoglycerate dehydrogenase (EC 1.1.1.95) (from data) 0.56 Sama_3654 gidB 16S rRNA methyltransferase GidB (RefSeq) low > 62
Shewanella loihica PV-4 0.39 Shew_0553 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) 0.62 Shew_3855 gidB glucose-inhibited division protein B (RefSeq) low > 60
Shewanella oneidensis MR-1 0.38 SO0585 D-isomer specific 2-hydroxyacid dehydrogenase family protein (NCBI ptt file) 0.58 SO4757 gidB glucose-inhibited division protein B (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.29 MIT1002_03160 Glyoxylate/hydroxypyruvate reductase A 0.55 MIT1002_04123 Ribosomal RNA small subunit methyltransferase G low > 70
Pectobacterium carotovorum WPP14 0.27 HER17_RS02495 D-2-hydroxyacid dehydrogenase 0.62 HER17_RS21605 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 75
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_4494 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.45 PfGW456L13_672 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB low > 87
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_17865 hydroxyacid dehydrogenase 0.46 AO353_10440 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 101
Pseudomonas simiae WCS417 0.26 PS417_07385 2-hydroxyacid dehydrogenase 0.42 PS417_28515 16S rRNA methyltransferase low > 88
Pseudomonas sp. SVBP6 0.26 COO64_RS26160 D-2-hydroxyacid dehydrogenase 0.44 COO64_RS02075 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 93
Pseudomonas sp. BP01 0.26 JOY50_RS01545 D-2-hydroxyacid dehydrogenase 0.46 JOY50_RS08385 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 84
Pseudomonas fluorescens SBW25-INTG 0.26 PFLU_RS07475 D-2-hydroxyacid dehydrogenase 0.42 PFLU_RS30170 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 109
Pseudomonas fluorescens SBW25 0.26 PFLU_RS07475 D-2-hydroxyacid dehydrogenase 0.42 PFLU_RS30170 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 109
Pseudomonas lactucae CFBP13502 0.25 GEMAOFIL_01611 Glyoxylate/hydroxypyruvate reductase A 0.42 GEMAOFIL_00173 Ribosomal RNA small subunit methyltransferase G low > 96
Pseudomonas orientalis W4I3 0.25 QF045_RS10040 D-2-hydroxyacid dehydrogenase 0.45 QF045_RS02900 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 93
Pseudomonas sp. DMC3 0.25 GFF2313 Glyoxylate/hydroxypyruvate reductase A 0.43 GFF568 Ribosomal RNA small subunit methyltransferase G low > 89
Pseudomonas fluorescens FW300-N1B4 0.25 Pf1N1B4_3347 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.45 Pf1N1B4_1935 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.25 Psyr_1565 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein 0.46 Psyr_5131 16S rRNA m(7)G-527 methyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.25 Psyr_1565 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein 0.46 Psyr_5131 16S rRNA m(7)G-527 methyltransferase low > 86
Pseudomonas fluorescens FW300-N2E2 0.25 Pf6N2E2_2725 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.46 Pf6N2E2_4204 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB low > 103
Dickeya dadantii 3937 0.25 DDA3937_RS18695 D-2-hydroxyacid dehydrogenase 0.63 DDA3937_RS21600 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 74
Dickeya dianthicola 67-19 0.25 HGI48_RS18625 D-2-hydroxyacid dehydrogenase 0.62 HGI48_RS21385 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 71
Pseudomonas putida KT2440 0.25 PP_4589 D-isomer specific 2-hydroxyacid dehydrogenase family protein 0.46 PP_0003 16S RNA methyltransferase low > 96
Pseudomonas sp. RS175 0.25 PFR28_00714 Glyoxylate/hydroxypyruvate reductase A 0.45 PFR28_04586 Ribosomal RNA small subunit methyltransferase G low > 88
Dickeya dianthicola ME23 0.24 DZA65_RS19760 D-2-hydroxyacid dehydrogenase 0.61 DZA65_RS22365 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 75
Pseudomonas segetis P6 0.24 MPMX49_01840 Glyoxylate/hydroxypyruvate reductase A 0.46 MPMX49_00244 Ribosomal RNA small subunit methyltransferase G low > 75
Pseudomonas fluorescens FW300-N2C3 0.24 AO356_04410 hydroxyacid dehydrogenase 0.46 AO356_11670 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 104
Pseudomonas aeruginosa PUPa3 0.24 DQ20_RS52955 D-2-hydroxyacid dehydrogenase 0.46 DQ20_RS58580 rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 101
Pseudomonas aeruginosa MRSN321 0.24 DY961_RS18815 D-2-hydroxyacid dehydrogenase 0.46 DY961_RS26160 rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 100
Pseudomonas aeruginosa PA14 0.24 IKLFDK_06150 D-2-hydroxyacid dehydrogenase 0.45 IKLFDK_25590 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 98
Pseudomonas sp. S08-1 0.24 OH686_05305 D-3-phosphoglycerate dehydrogenase 0.46 OH686_12665 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 80
Paraburkholderia sabiae LMG 24235 0.23 QEN71_RS32025 glyoxylate/hydroxypyruvate reductase A 0.38 QEN71_RS29340 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 153
Paraburkholderia graminis OAS925 0.21 ABIE53_005027 glyoxylate/hydroxypyruvate reductase A 0.37 ABIE53_000263 16S rRNA (guanine527-N7)-methyltransferase low > 113
Acinetobacter radioresistens SK82 0.20 MPMX26_01500 Glyoxylate/hydroxypyruvate reductase A 0.38 MPMX26_01214 Ribosomal RNA small subunit methyltransferase G — —
Pseudomonas stutzeri RCH2 0.20 Psest_2788 Phosphoglycerate dehydrogenase and related dehydrogenases 0.42 Psest_4364 16S rRNA (guanine(527)-N(7))-methyltransferase GidB low > 67
Serratia liquefaciens MT49 0.20 IAI46_09955 glyoxylate/hydroxypyruvate reductase GhrA 0.67 IAI46_25115 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 87
Lysobacter sp. OAE881 0.20 ABIE51_RS10035 glyoxylate/hydroxypyruvate reductase A 0.38 ABIE51_RS01740 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 62
Paraburkholderia bryophila 376MFSha3.1 0.20 H281DRAFT_06341 glyoxylate/hydroxypyruvate reductase A 0.37 H281DRAFT_02386 16S rRNA m(7)G-527 methyltransferase (EC 2.1.1.170) low > 103
Klebsiella michiganensis M5al 0.20 BWI76_RS21910 glyoxylate/hydroxypyruvate reductase A 0.63 BWI76_RS00225 16S rRNA methyltransferase G low > 92
Variovorax sp. OAS795 0.20 ABID97_RS25925 glyoxylate/hydroxypyruvate reductase A 0.34 ABID97_RS02910 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 91
Azospirillum sp. SherDot2 0.19 MPMX19_00078 Glyoxylate/hydroxypyruvate reductase A 0.16 MPMX19_02570 Ribosomal RNA small subunit methyltransferase G — —
Ralstonia solanacearum IBSBF1503 0.19 RALBFv3_RS18895 glyoxylate/hydroxypyruvate reductase A 0.36 RALBFv3_RS08860 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Ralstonia solanacearum UW163 0.19 UW163_RS20235 glyoxylate/hydroxypyruvate reductase A 0.36 UW163_RS04750 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Ralstonia solanacearum PSI07 0.19 RPSI07_RS04655 glyoxylate/hydroxypyruvate reductase A 0.37 RPSI07_RS08415 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 81
Enterobacter sp. TBS_079 0.19 MPMX20_01715 Glyoxylate/hydroxypyruvate reductase A 0.62 MPMX20_04627 Ribosomal RNA small subunit methyltransferase G low > 85
Klebsiella pneumoniae MKP103 0.19 KDGMDA_18520 glyoxylate/hydroxypyruvate reductase GhrA 0.62 KDGMDA_08835 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 95
Ralstonia sp. UNC404CL21Col 0.18 ABZR87_RS21550 glyoxylate/hydroxypyruvate reductase A 0.37 ABZR87_RS04120 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.37 30
Variovorax sp. SCN45 0.18 GFF2017 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.34 GFF3337 16S rRNA (guanine(527)-N(7))-methyltransferase (EC 2.1.1.170) low > 127
Azospirillum brasilense Sp245 0.18 AZOBR_RS03790 D-2-hydroxyacid dehydrogenase 0.15 AZOBR_RS01815 16S rRNA methyltransferase low > 97
Castellaniella sp019104865 MT123 0.18 ABCV34_RS06730 glyoxylate/hydroxypyruvate reductase A 0.33 ABCV34_RS11720 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 48
Pantoea agglomerans CFBP13505 P0401 0.17 PagCFBP13505_RS01525 glyoxylate/hydroxypyruvate reductase A 0.64 PagCFBP13505_RS19040 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 74

Not shown: 9 genomes with orthologs for CSW01_01380 only; 40 genomes with orthologs for CSW01_14050 only