Conservation of cofitness between CSW01_03210 and CSW01_13810 in Vibrio cholerae E7946 ATCC 55056

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03210 iron ABC transporter permease 1.0 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) 0.94 12
Shewanella sp. ANA-3 0.51 Shewana3_3516 binding-protein-dependent transport systems inner membrane component (RefSeq) 0.36 Shewana3_0147 phosphoenolpyruvate carboxykinase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.50 SO0743 iron(III) ABC transporter, permease protein (NCBI ptt file) 0.36 SO0162 pckA phosphoenolpyruvate carboxykinase (ATP) (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.47 Shew_0862 binding-protein-dependent transport systems inner membrane component (RefSeq) 0.37 Shew_3623 phosphoenolpyruvate carboxykinase (RefSeq) low > 60
Marinobacter adhaerens HP15 0.46 HP15_1455 iron(III) ABC transporter, permease protein 0.36 HP15_3498 phosphoenolpyruvate carboxykinase (ATP)
Shewanella amazonensis SB2B 0.45 Sama_0667 iron(III) ABC transporter, permease protein (RefSeq) 0.38 Sama_0165 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (from data) low > 62
Agrobacterium fabrum C58 0.38 Atu0613 ABC transporter, membrane spanning protein 0.42 Atu0035 phosphoenolpyruvate carboxykinase low > 89
Sinorhizobium meliloti 1021 0.36 SMc00775 iron(III) permease 0.41 SMc02562 phosphoenolpyruvate carboxykinase low > 103
Dinoroseobacter shibae DFL-12 0.36 Dshi_2023 binding-protein-dependent transport systems inner membrane component (RefSeq) 0.39 Dshi_0213 Phosphoenolpyruvate carboxykinase (ATP) (RefSeq)
Phaeobacter inhibens DSM 17395 0.35 PGA1_c32540 putative Fe(3+)-transport system protein SfuB 0.39 PGA1_c01140 phosphoenolpyruvate carboxykinase 0.57 57
Pectobacterium carotovorum WPP14 0.33 HER17_RS05515 iron ABC transporter permease 0.80 HER17_RS01710 phosphoenolpyruvate carboxykinase (ATP) low > 75
Pseudomonas orientalis W4I3 0.33 QF045_RS01630 iron ABC transporter permease 0.35 QF045_RS04340 phosphoenolpyruvate carboxykinase low > 93
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_2233 Ferric iron ABC transporter, permease protein 0.34 Pf1N1B4_1779 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
Pseudomonas lactucae CFBP13502 0.32 GEMAOFIL_05590 hypothetical protein 0.35 GEMAOFIL_00469 Phosphoenolpyruvate carboxykinase (ATP) low > 96
Pseudomonas segetis P6 0.32 ACVTMO_RS22240 ABC transporter permease 0.32 ACVTMO_RS03850 phosphoenolpyruvate carboxykinase low > 75
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_4484 Ferric iron ABC transporter, permease protein 0.32 Pf6N2E2_3899 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) low > 103
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_08740 iron ABC transporter permease 0.33 AO353_11775 phosphoenolpyruvate carboxykinase [ATP] low > 101
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_13030 iron ABC transporter permease 0.32 AO356_10140 phosphoenolpyruvate carboxykinase [ATP] low > 104
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS28920 iron ABC transporter permease 0.34 PFLU_RS01320 phosphoenolpyruvate carboxykinase low > 109
Pseudomonas sp. S08-1 0.32 OH686_11180 Ferric iron ABC transporter, permease protein 0.32 OH686_11060 phosphoenolpyruvate carboxykinase (ATP) low > 80
Pseudomonas fluorescens SBW25 0.32 PFLU_RS28920 iron ABC transporter permease 0.34 PFLU_RS01320 phosphoenolpyruvate carboxykinase low > 109
Pseudomonas simiae WCS417 0.31 PS417_27260 iron ABC transporter permease 0.34 PS417_01210 hypothetical protein low > 88
Pseudomonas sp. RS175 0.31 PFR28_04317 hypothetical protein 0.34 PFR28_04874 Phosphoenolpyruvate carboxykinase (ATP) 0.28 17
Xanthobacter sp. DMC5 0.31 GFF360 hypothetical protein 0.40 GFF4136 Phosphoenolpyruvate carboxykinase (ATP)
Pseudomonas sp. BP01 0.30 JOY50_RS22420 ABC transporter permease 0.33 JOY50_RS18315 phosphoenolpyruvate carboxykinase low > 84
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_0245 Binding-protein-dependent transport systems inner membrane component 0.33 Psyr_0168 Phosphoenolpyruvate carboxykinase (ATP) low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_0245 Binding-protein-dependent transport systems inner membrane component 0.33 Psyr_0168 Phosphoenolpyruvate carboxykinase (ATP) low > 86
Pseudomonas sp. DMC3 0.30 GFF311 hypothetical protein 0.33 GFF4175 Phosphoenolpyruvate carboxykinase (ATP) low > 89
Rhizobium sp. OAE497 0.30 ABIE40_RS21705 iron ABC transporter permease 0.40 ABIE40_RS19415 phosphoenolpyruvate carboxykinase low > 107
Kangiella aquimarina DSM 16071 0.30 B158DRAFT_0541 ABC-type Fe3+ transport system, permease component 0.76 B158DRAFT_2395 phosphoenolpyruvate carboxykinase (ATP)
Pseudomonas sp. SVBP6 0.30 COO64_RS00965 iron ABC transporter permease 0.33 COO64_RS00660 phosphoenolpyruvate carboxykinase low > 93
Pseudomonas fluorescens GW456-L13 0.29 PfGW456L13_901 Ferric iron ABC transporter, permease protein 0.33 PfGW456L13_420 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) low > 87
Bosea sp. OAE506 0.29 ABIE41_RS15165 iron ABC transporter permease 0.40 ABIE41_RS02665 phosphoenolpyruvate carboxykinase low > 77
Rahnella sp. WP5 0.28 EX31_RS17575 iron ABC transporter permease 0.79 EX31_RS04780 phosphoenolpyruvate carboxykinase (ATP) low > 89
Pseudomonas aeruginosa MRSN321 0.28 DY961_RS11950 iron ABC transporter permease 0.34 DY961_RS11825 phosphoenolpyruvate carboxykinase
Pseudomonas aeruginosa PA14 0.28 IKLFDK_27390 iron ABC transporter permease 0.34 IKLFDK_27515 phosphoenolpyruvate carboxykinase low > 98
Pseudomonas stutzeri RCH2 0.27 Psest_0180 ABC-type Fe3+ transport system, permease component 0.33 Psest_3988 phosphoenolpyruvate carboxykinase (ATP)
Pseudomonas aeruginosa PUPa3 0.27 DQ20_RS50165 iron ABC transporter permease 0.34 DQ20_RS50285 phosphoenolpyruvate carboxykinase low > 101
Dickeya dadantii 3937 0.26 DDA3937_RS16000 iron ABC transporter permease 0.81 DDA3937_RS19610 phosphoenolpyruvate carboxykinase (ATP) low > 74
Dickeya dianthicola 67-19 0.26 HGI48_RS16120 iron ABC transporter permease 0.81 HGI48_RS19740 phosphoenolpyruvate carboxykinase (ATP) low > 71
Dickeya dianthicola ME23 0.26 DZA65_RS17205 iron ABC transporter permease 0.81 DZA65_RS20830 phosphoenolpyruvate carboxykinase (ATP) low > 75
Rhodopseudomonas palustris CGA009 0.24 TX73_021530 iron ABC transporter permease 0.42 TX73_001865 phosphoenolpyruvate carboxykinase
Alteromonas macleodii MIT1002 0.12 MIT1002_00116 Spermidine/putrescine transport system permease protein PotB 0.36 MIT1002_03972 Phosphoenolpyruvate carboxykinase [ATP] low > 70
Enterobacter sp. TBS_079 0.08 MPMX20_01120 hypothetical protein 0.79 MPMX20_04290 Phosphoenolpyruvate carboxykinase (ATP) low > 85
Enterobacter asburiae PDN3 0.08 EX28DRAFT_2436 ABC-type Fe3+ transport system, permease component 0.79 EX28DRAFT_4140 phosphoenolpyruvate carboxykinase (ATP) low > 76
Klebsiella michiganensis M5al 0.07 BWI76_RS10475 binding-protein-dependent transport system inner membrane protein 0.79 BWI76_RS26155 phosphoenolpyruvate carboxykinase (ATP) low > 92
Erwinia tracheiphila SCR3 0.07 LU632_RS03340 iron ABC transporter permease 0.78 LU632_RS22930 pckA phosphoenolpyruvate carboxykinase (ATP) low > 73
Erwinia tracheiphila HP pepo 2.2 0.07 IJEDHG_05515 Iron ABC transporter permease 0.78 IJEDHG_11970 pckA phosphoenolpyruvate carboxykinase (ATP) low > 61

Not shown: 15 genomes with orthologs for CSW01_03210 only; 32 genomes with orthologs for CSW01_13810 only