Conservation of cofitness between CSW01_03205 and CSW01_13810 in Vibrio cholerae E7946 ATCC 55056

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03205 iron ABC transporter substrate-binding protein 1.0 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) 0.93 10
Shewanella amazonensis SB2B 0.67 Sama_0666 iron(III) ABC transporter, periplasmic iron(III)-binding protein (RefSeq) 0.38 Sama_0165 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (from data) low > 62
Shewanella loihica PV-4 0.66 Shew_0861 extracellular solute-binding protein (RefSeq) 0.37 Shew_3623 phosphoenolpyruvate carboxykinase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.64 SO0744 iron(III) ABC transporter, periplasmic iron(III)-binding protein (NCBI ptt file) 0.36 SO0162 pckA phosphoenolpyruvate carboxykinase (ATP) (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.64 Shewana3_3517 extracellular solute-binding protein (RefSeq) 0.36 Shewana3_0147 phosphoenolpyruvate carboxykinase (RefSeq) low > 73
Marinobacter adhaerens HP15 0.53 HP15_1456 extracellular solute-binding protein, family 1 0.36 HP15_3498 phosphoenolpyruvate carboxykinase (ATP)
Sinorhizobium meliloti 1021 0.52 SMc00784 iron binding protein 0.41 SMc02562 phosphoenolpyruvate carboxykinase low > 103
Agrobacterium fabrum C58 0.49 Atu0202 ABC transporter, substrate binding protein (iron) 0.42 Atu0035 phosphoenolpyruvate carboxykinase low > 89
Rhodopseudomonas palustris CGA009 0.47 TX73_021525 Fe(3+) ABC transporter substrate-binding protein 0.42 TX73_001865 phosphoenolpyruvate carboxykinase
Rhizobium sp. OAE497 0.45 ABIE40_RS21710 extracellular solute-binding protein 0.40 ABIE40_RS19415 phosphoenolpyruvate carboxykinase low > 107
Rahnella sp. WP5 0.43 EX31_RS17570 extracellular solute-binding protein 0.79 EX31_RS04780 phosphoenolpyruvate carboxykinase (ATP) low > 89
Bosea sp. OAE506 0.43 ABIE41_RS15170 extracellular solute-binding protein 0.40 ABIE41_RS02665 phosphoenolpyruvate carboxykinase low > 77
Xanthobacter sp. DMC5 0.43 GFF361 Iron uptake protein A2 0.40 GFF4136 Phosphoenolpyruvate carboxykinase (ATP)
Pectobacterium carotovorum WPP14 0.43 HER17_RS14365 Fe(3+) ABC transporter substrate-binding protein 0.80 HER17_RS01710 phosphoenolpyruvate carboxykinase (ATP) low > 75
Pseudomonas sp. SVBP6 0.34 COO64_RS00970 extracellular solute-binding protein 0.33 COO64_RS00660 phosphoenolpyruvate carboxykinase low > 93
Pseudomonas stutzeri RCH2 0.34 Psest_0179 ABC-type Fe3+ transport system, periplasmic component 0.33 Psest_3988 phosphoenolpyruvate carboxykinase (ATP)
Phaeobacter inhibens DSM 17395 0.33 PGA1_c32510 iron uptake protein FutA 0.39 PGA1_c01140 phosphoenolpyruvate carboxykinase 0.42 59
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_13025 iron ABC transporter substrate-binding protein 0.32 AO356_10140 phosphoenolpyruvate carboxykinase [ATP] low > 104
Pseudomonas sp. S08-1 0.32 OH686_11185 Ferric iron ABC transporter, iron-binding protein 0.32 OH686_11060 phosphoenolpyruvate carboxykinase (ATP) low > 80
Pseudomonas sp. BP01 0.32 JOY50_RS22425 extracellular solute-binding protein 0.33 JOY50_RS18315 phosphoenolpyruvate carboxykinase low > 84
Pseudomonas fluorescens SBW25 0.32 PFLU_RS28925 extracellular solute-binding protein 0.34 PFLU_RS01320 phosphoenolpyruvate carboxykinase 0.59 26
Pseudomonas lactucae CFBP13502 0.32 GEMAOFIL_05591 putative binding protein component of ABC iron transporter 0.35 GEMAOFIL_00469 Phosphoenolpyruvate carboxykinase (ATP) low > 96
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS28925 extracellular solute-binding protein 0.34 PFLU_RS01320 phosphoenolpyruvate carboxykinase low > 109
Pseudomonas orientalis W4I3 0.32 QF045_RS01635 extracellular solute-binding protein 0.35 QF045_RS04340 phosphoenolpyruvate carboxykinase low > 93
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_4483 Ferric iron ABC transporter, iron-binding protein 0.32 Pf6N2E2_3899 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) low > 103
Pseudomonas simiae WCS417 0.32 PS417_27265 iron ABC transporter substrate-binding protein 0.34 PS417_01210 hypothetical protein low > 88
Pseudomonas segetis P6 0.32 MPMX49_04483 putative binding protein component of ABC iron transporter 0.32 MPMX49_00777 Phosphoenolpyruvate carboxykinase (ATP) low > 75
Pseudomonas aeruginosa PUPa3 0.32 DQ20_RS50160 extracellular solute-binding protein 0.34 DQ20_RS50285 phosphoenolpyruvate carboxykinase low > 101
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_2232 Ferric iron ABC transporter, iron-binding protein 0.34 Pf1N1B4_1779 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
Pseudomonas aeruginosa MRSN321 0.32 DY961_RS11955 extracellular solute-binding protein 0.34 DY961_RS11825 phosphoenolpyruvate carboxykinase
Pseudomonas aeruginosa PA14 0.32 IKLFDK_27385 putative binding protein component of ABC iron transporter PA5217 0.34 IKLFDK_27515 phosphoenolpyruvate carboxykinase low > 98
Pseudomonas sp. RS175 0.32 PFR28_04318 putative binding protein component of ABC iron transporter 0.34 PFR28_04874 Phosphoenolpyruvate carboxykinase (ATP) 0.25 61
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_900 Ferric iron ABC transporter, iron-binding protein 0.33 PfGW456L13_420 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) low > 87
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_08745 iron ABC transporter substrate-binding protein 0.33 AO353_11775 phosphoenolpyruvate carboxykinase [ATP] low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_0244 extracellular solute-binding protein, family 1 0.33 Psyr_0168 Phosphoenolpyruvate carboxykinase (ATP) low > 86
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_0244 extracellular solute-binding protein, family 1 0.33 Psyr_0168 Phosphoenolpyruvate carboxykinase (ATP) low > 86
Pseudomonas sp. DMC3 0.31 GFF312 putative binding protein component of ABC iron transporter 0.33 GFF4175 Phosphoenolpyruvate carboxykinase (ATP) low > 89
Kangiella aquimarina DSM 16071 0.31 B158DRAFT_0540 ABC-type Fe3+ transport system, periplasmic component 0.76 B158DRAFT_2395 phosphoenolpyruvate carboxykinase (ATP)
Dinoroseobacter shibae DFL-12 0.31 Dshi_2021 extracellular solute-binding protein family 1 (RefSeq) 0.39 Dshi_0213 Phosphoenolpyruvate carboxykinase (ATP) (RefSeq)
Erwinia tracheiphila HP pepo 2.2 0.15 IJEDHG_05510 iron ABC transporter substrate-binding protein 0.78 IJEDHG_11970 pckA phosphoenolpyruvate carboxykinase (ATP) low > 61
Erwinia tracheiphila SCR3 0.15 LU632_RS03345 iron ABC transporter substrate-binding protein 0.78 LU632_RS22930 pckA phosphoenolpyruvate carboxykinase (ATP) low > 73
Enterobacter asburiae PDN3 0.14 EX28DRAFT_2437 ABC-type Fe3+ transport system, periplasmic component 0.79 EX28DRAFT_4140 phosphoenolpyruvate carboxykinase (ATP) low > 76
Enterobacter sp. TBS_079 0.14 MPMX20_01119 Fe(3+)-binding periplasmic protein 0.79 MPMX20_04290 Phosphoenolpyruvate carboxykinase (ATP) low > 85
Dickeya dadantii 3937 0.14 DDA3937_RS08590 iron ABC transporter substrate-binding protein 0.81 DDA3937_RS19610 phosphoenolpyruvate carboxykinase (ATP) low > 74
Klebsiella michiganensis M5al 0.13 BWI76_RS10470 iron ABC transporter substrate-binding protein 0.79 BWI76_RS26155 phosphoenolpyruvate carboxykinase (ATP) low > 92
Serratia liquefaciens MT49 0.13 IAI46_13015 iron ABC transporter substrate-binding protein 0.81 IAI46_23770 phosphoenolpyruvate carboxykinase (ATP) low > 87
Dickeya dianthicola ME23 0.13 DZA65_RS09025 iron ABC transporter substrate-binding protein 0.81 DZA65_RS20830 phosphoenolpyruvate carboxykinase (ATP) low > 75
Dickeya dianthicola 67-19 0.13 HGI48_RS08730 iron ABC transporter substrate-binding protein 0.81 HGI48_RS19740 phosphoenolpyruvate carboxykinase (ATP) low > 71

Not shown: 15 genomes with orthologs for CSW01_03205 only; 32 genomes with orthologs for CSW01_13810 only