Conservation of cofitness between CSW01_04945 and CSW01_13635 in Vibrio cholerae E7946 ATCC 55056

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04945 cysteine synthase A 1.0 CSW01_13635 thiol:disulfide interchange protein DsbD 0.49 15
Pectobacterium carotovorum WPP14 0.79 HER17_RS17170 cysteine synthase A 0.47 HER17_RS18850 protein-disulfide reductase DsbD low > 75
Escherichia coli ECOR38 0.79 HEPCGN_21380 cysK cysteine synthase A 0.46 HEPCGN_10675 dsbD protein-disulfide reductase DsbD low > 88
Dickeya dadantii 3937 0.79 DDA3937_RS04490 cysteine synthase A 0.43 DDA3937_RS02705 protein-disulfide reductase DsbD low > 74
Escherichia coli ECRC62 0.79 BNILDI_12745 cysK cysteine synthase A 0.47 BNILDI_06775 dsbD protein-disulfide reductase DsbD low > 75
Escherichia coli ECRC102 0.79 NIAGMN_19970 cysK cysteine synthase A 0.47 NIAGMN_10295 dsbD protein-disulfide reductase DsbD low > 80
Escherichia fergusonii Becca 0.79 EFB2_01462 Cysteine synthase A 0.47 EFB2_04399 Thiol:disulfide interchange protein DsbD low > 86
Escherichia coli ECRC98 0.79 JDDGAC_26150 cysK cysteine synthase A 0.47 JDDGAC_16085 dsbD protein-disulfide reductase DsbD low > 87
Escherichia coli ECOR27 0.79 NOLOHH_13880 cysK cysteine synthase A 0.47 NOLOHH_04715 dsbD protein-disulfide reductase DsbD low > 76
Escherichia coli ECRC101 0.79 MCAODC_12730 cysK cysteine synthase A 0.46 MCAODC_02960 dsbD protein-disulfide reductase DsbD low > 87
Escherichia coli BW25113 0.79 b2414 cysK cysteine synthase A, O-acetylserine sulfhydrolase A subunit (NCBI) 0.47 b4136 dipZ thiol:disulfide interchange protein precursor (NCBI) low > 76
Escherichia coli Nissle 1917 0.79 ECOLIN_RS13870 cysteine synthase A 0.47 ECOLIN_RS24030 protein-disulfide reductase DsbD low > 55
Escherichia coli ECRC100 0.79 OKFHMN_22200 cysK cysteine synthase A 0.47 OKFHMN_12450 dsbD protein-disulfide reductase DsbD low > 79
Escherichia coli BL21 0.79 ECD_02314 cysteine synthase A, O-acetylserine sulfhydrolase A subunit 0.47 ECD_04006 thiol:disulfide interchange protein and activator of DsbC low > 61
Escherichia coli ECRC99 0.79 KEDOAH_06020 cysK cysteine synthase A 0.47 KEDOAH_15715 dsbD protein-disulfide reductase DsbD — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_01309 Cysteine synthase A 0.47 OHPLBJKB_03907 Thiol:disulfide interchange protein DsbD low > 74
Enterobacter sp. TBS_079 0.78 MPMX20_03308 Cysteine synthase A 0.45 MPMX20_00416 Thiol:disulfide interchange protein DsbD low > 85
Enterobacter asburiae PDN3 0.78 EX28DRAFT_0214 cysteine synthase A 0.46 EX28DRAFT_3333 Thiol:disulfide interchange protein low > 76
Dickeya dianthicola ME23 0.78 DZA65_RS04370 cysteine synthase A 0.42 DZA65_RS02835 protein-disulfide reductase DsbD low > 75
Dickeya dianthicola 67-19 0.78 HGI48_RS04450 cysteine synthase A 0.42 HGI48_RS02680 protein-disulfide reductase DsbD low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.78 GFF2044 Cysteine synthase (EC 2.5.1.47) 0.46 GFF2016 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) low > 78
Serratia liquefaciens MT49 0.78 IAI46_18445 cysteine synthase A 0.45 IAI46_01465 protein-disulfide reductase DsbD low > 87
Klebsiella michiganensis M5al 0.78 BWI76_RS20640 cysteine synthase A 0.47 BWI76_RS02315 protein-disulfide reductase DsbD low > 92
Shewanella oneidensis MR-1 0.78 SO2903 cysK cysteine synthase A (NCBI ptt file) 0.44 SO0696 dsbD thiol:disulfide interchange protein DsbD (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.78 Shewana3_1561 cysteine synthase (RefSeq) 0.43 Shewana3_3576 dipZ thiol:disulfide interchange protein precursor (RefSeq) low > 73
Klebsiella pneumoniae MKP103 0.78 KDGMDA_27485 cysteine synthase A 0.45 KDGMDA_10805 Thiol:disulfide interchange protein DsbD low > 95
Pantoea agglomerans CFBP13505 P0401 0.77 PagCFBP13505_RS19985 cysteine synthase A 0.44 PagCFBP13505_RS09505 protein-disulfide reductase DsbD low > 74
Pantoea sp. MT58 0.77 IAI47_05440 cysteine synthase A 0.43 IAI47_17335 protein-disulfide reductase DsbD low > 76
Erwinia tracheiphila SCR3 0.77 LU632_RS06625 cysK cysteine synthase A 0.40 LU632_RS01840 protein-disulfide reductase DsbD low > 73
Erwinia tracheiphila HP pepo 2.2 0.77 IJEDHG_17655 cysK cysteine synthase A 0.40 IJEDHG_07065 Thiol:disulfide interchange protein DsbD low > 61
Erwinia amylovora T8 0.77 OLJFJH_10865 cysteine synthase A 0.42 OLJFJH_02625 protein-disulfide reductase DsbD low > 58
Rahnella sp. WP5 0.76 EX31_RS20175 cysteine synthase A 0.46 EX31_RS08975 protein-disulfide reductase DsbD low > 89
Shewanella loihica PV-4 0.75 Shew_2382 cysteine synthase A (RefSeq) 0.42 Shew_3266 dipZ thiol:disulfide interchange protein precursor (RefSeq) low > 60
Shewanella amazonensis SB2B 0.75 Sama_1508 cysteine synthase A (RefSeq) 0.42 Sama_0538 dipZ thiol:disulfide interchange protein precursor (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.73 MIT1002_02237 Cysteine synthase A 0.38 MIT1002_03939 Thiol:disulfide interchange protein DsbD precursor — —
Marinobacter adhaerens HP15 0.72 HP15_3453 cysteine synthase A 0.30 HP15_2101 membrane protein containing cytochrome c assembly protein, transmembrane region domain low > 73
Pseudomonas sp. DMC3 0.71 GFF2334 Cysteine synthase A 0.29 GFF4549 Thiol:disulfide interchange protein DsbD — —
Pseudomonas sp. RS175 0.71 PFR28_00734 Cysteine synthase A 0.27 PFR28_01029 Thiol:disulfide interchange protein DsbD — —
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_04305 cysteine synthase 0.28 AO356_02870 thiol:disulfide interchange protein — —
Pseudomonas lactucae CFBP13502 0.70 GEMAOFIL_01633 Cysteine synthase A 0.25 GEMAOFIL_04105 Thiol:disulfide interchange protein DsbD — —
Pseudomonas fluorescens FW300-N1B4 0.70 Pf1N1B4_3374 Cysteine synthase (EC 2.5.1.47) 0.27 Pf1N1B4_210 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) low > 87
Pseudomonas fluorescens FW300-N2E2 0.70 Pf6N2E2_2700 Cysteine synthase (EC 2.5.1.47) 0.28 Pf6N2E2_2398 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) — —
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_18020 cysteine synthase 0.25 AO353_19365 thiol:disulfide interchange protein low > 101
Pseudomonas fluorescens GW456-L13 0.70 PfGW456L13_4472 Cysteine synthase (EC 2.5.1.47) 0.28 PfGW456L13_2298 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) low > 87
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_1583 cysteine synthase 0.24 Psyr_4398 Protein-disulfide reductase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_1583 cysteine synthase 0.24 Psyr_4398 Protein-disulfide reductase — —
Pseudomonas simiae WCS417 0.70 PS417_07505 cysteine synthase 0.26 PS417_19525 thiol:disulfide interchange protein — —
Pseudomonas fluorescens SBW25-INTG 0.70 PFLU_RS07585 cysteine synthase A 0.25 PFLU_RS21490 protein-disulfide reductase DsbD — —
Pseudomonas fluorescens SBW25 0.70 PFLU_RS07585 cysteine synthase A 0.25 PFLU_RS21490 protein-disulfide reductase DsbD — —
Pseudomonas sp. S08-1 0.69 OH686_05215 cysteine synthase A 0.23 OH686_07580 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase — —
Pseudomonas orientalis W4I3 0.69 QF045_RS10150 cysteine synthase A 0.26 QF045_RS21665 protein-disulfide reductase DsbD — —
Pseudomonas putida KT2440 0.69 PP_4571 cysteine synthase A 0.25 PP_0561 thiol/disulfide interchange protein 1 low > 96
Pseudomonas sp. BP01 0.69 JOY50_RS01420 cysK cysteine synthase A 0.26 JOY50_RS23140 protein-disulfide reductase DsbD low > 84
Pseudomonas sp. SVBP6 0.69 COO64_RS22165 cysK cysteine synthase A 0.24 COO64_RS18765 dsbD protein-disulfide reductase DsbD low > 93
Pseudomonas aeruginosa PA14 0.68 IKLFDK_13610 cysteine synthase A 0.24 IKLFDK_12170 Thiol:disulfide interchange protein DsbD 2 low > 98
Pseudomonas aeruginosa MRSN321 0.68 DY961_RS03660 cysK;go_function=cysteine cysteine synthase A 0.24 DY961_RS05265 protein-disulfide reductase DsbD low > 100
Pseudomonas aeruginosa PUPa3 0.68 DQ20_RS34700 cysK;go_function=cysteine cysteine synthase A 0.24 DQ20_RS55390 protein-disulfide reductase DsbD low > 101
Pseudomonas segetis P6 0.67 MPMX49_02972 Cysteine synthase A 0.26 MPMX49_04100 Thiol:disulfide interchange protein DsbD — —
Pseudomonas stutzeri RCH2 0.65 Psest_1855 cysteine synthase A 0.27 Psest_1603 Thiol:disulfide interchange protein low > 67
Methylophilus sp. DMC18 0.63 GFF399 Cysteine synthase 0.29 GFF2039 Thiol:disulfide interchange protein DsbD — —
Dechlorosoma suillum PS 0.61 Dsui_2521 cysteine synthase A 0.31 Dsui_0718 thiol:disulfide interchange protein — —
Acinetobacter baumannii LAC-4 0.59 RR41_RS18015 cysteine synthase A 0.24 RR41_RS00770 protein-disulfide reductase DsbD low > 55
Brevundimonas sp. GW460-12-10-14-LB2 0.48 A4249_RS10255 cysteine synthase A 0.17 A4249_RS11500 protein-disulfide reductase DsbD low > 48
Cupriavidus basilensis FW507-4G11 0.38 RR42_RS21960 cysteine synthase 0.29 RR42_RS19110 thiol:disulfide interchange protein — —

Not shown: 32 genomes with orthologs for CSW01_04945 only; 13 genomes with orthologs for CSW01_13635 only