Conservation of cofitness between CSW01_01370 and CSW01_13550 in Vibrio cholerae E7946 ATCC 55056

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01370 mechanosensitive ion channel family protein 1.0 CSW01_13550 O-succinylhomoserine (thiol)-lyase 0.44 15
Kangiella aquimarina DSM 16071 0.60 B158DRAFT_2238 Small-conductance mechanosensitive channel 0.58 B158DRAFT_2459 cystathionine gamma-synthase (EC 2.5.1.48) low > 40
Serratia liquefaciens MT49 0.57 IAI46_04810 mechanosensitive ion channel 0.59 IAI46_24540 cystathionine gamma-synthase low > 86
Pectobacterium carotovorum WPP14 0.56 HER17_RS16010 mechanosensitive ion channel 0.60 HER17_RS00910 cystathionine gamma-synthase low > 75
Klebsiella michiganensis M5al 0.55 BWI76_RS07440 miniconductance mechanosensitive channel 0.58 BWI76_RS00785 cystathionine gamma-synthase low > 92
Escherichia coli BW25113 0.54 b0577 ybdG predicted mechanosensitive channel (NCBI) 0.59 b3939 metB cystathionine gamma-synthase (NCBI) low > 76
Escherichia coli ECRC99 0.54 KEDOAH_20295 ybdG mechanosensitive ion channel YbdG 0.59 KEDOAH_14485 metB cystathionine gamma-synthase — —
Escherichia coli ECRC62 0.54 BNILDI_22065 ybdG mechanosensitive ion channel YbdG 0.59 BNILDI_05715 metB cystathionine gamma-synthase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_03132 Miniconductance mechanosensitive channel YbdG 0.59 OHPLBJKB_04111 Cystathionine gamma-synthase low > 73
Escherichia coli BL21 0.54 ECD_00538 mechanosensitive channel protein, miniconductance 0.59 ECD_03825 cystathionine gamma-synthase, PLP-dependent low > 61
Escherichia coli ECOR27 0.54 NOLOHH_24055 ybdG mechanosensitive ion channel YbdG 0.59 NOLOHH_05820 metB cystathionine gamma-synthase low > 75
Escherichia coli ECRC101 0.54 MCAODC_26890 ybdG mechanosensitive ion channel YbdG 0.59 MCAODC_04175 metB cystathionine gamma-synthase low > 87
Escherichia coli ECRC102 0.54 NIAGMN_05730 ybdG mechanosensitive ion channel YbdG 0.59 NIAGMN_11430 metB cystathionine gamma-synthase — —
Escherichia coli ECRC100 0.54 OKFHMN_07675 ybdG mechanosensitive ion channel YbdG 0.59 OKFHMN_13675 metB cystathionine gamma-synthase low > 80
Escherichia coli ECRC98 0.54 JDDGAC_11320 ybdG mechanosensitive ion channel YbdG 0.59 JDDGAC_17300 metB cystathionine gamma-synthase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF4472 Uncharacterized protein ybdG 0.59 GFF2323 Cystathionine gamma-synthase (EC 2.5.1.48) low > 78
Escherichia coli Nissle 1917 0.54 ECOLIN_RS03155 mechanosensitive ion channel YbdG 0.59 ECOLIN_RS22725 cystathionine gamma-synthase — —
Escherichia fergusonii Becca 0.54 EFB2_03517 Miniconductance mechanosensitive channel YbdG 0.59 EFB2_04679 Cystathionine gamma-synthase low > 86
Escherichia coli ECOR38 0.54 HEPCGN_00615 ybdG mechanosensitive ion channel YbdG 0.59 HEPCGN_12345 metB cystathionine gamma-synthase low > 87
Erwinia amylovora T8 0.54 OLJFJH_11020 miniconductance mechanosensitive channel 0.54 OLJFJH_06095 cystathionine gamma-synthase low > 58
Enterobacter asburiae PDN3 0.53 EX28DRAFT_2431 Small-conductance mechanosensitive channel 0.59 EX28DRAFT_4411 cystathionine gamma-synthase (EC 2.5.1.48) low > 76
Enterobacter sp. TBS_079 0.53 MPMX20_01129 Miniconductance mechanosensitive channel YbdG 0.59 MPMX20_04531 Cystathionine gamma-synthase low > 85
Erwinia tracheiphila SCR3 0.52 LU632_RS06755 mechanosensitive ion channel family protein 0.57 LU632_RS19640 metB cystathionine gamma-synthase low > 74
Shewanella sp. ANA-3 0.45 Shewana3_0117 MscS mechanosensitive ion channel (RefSeq) 0.59 Shewana3_3614 cystathionine gamma-synthase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.45 SO0121 hypothetical Small-conductance mechanosensitive channel (NCBI ptt file) 0.57 SO4056 metB cystathionine gamma-synthase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.45 Shew_3752 MscS mechanosensitive ion channel (RefSeq) 0.56 Shew_0520 O-succinylhomoserine (thiol)-lyase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.44 Sama_3632 putative small-conductance mechanosensitive channel (RefSeq) 0.59 Sama_3171 cystathionine gamma-synthase (RefSeq) low > 62
Pseudomonas stutzeri RCH2 0.44 Psest_1281 Small-conductance mechanosensitive channel 0.32 Psest_2578 O-succinylhomoserine sulfhydrylase low > 67
Bacteroides ovatus ATCC 8483 0.42 BACOVA_04843 transporter, small conductance mechanosensitive ion channel MscS family protein 0.26 BACOVA_03030 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase low > 94
Parabacteroides merdae CL09T00C40 0.41 HMPREF1078_RS02480 mechanosensitive ion channel 0.24 HMPREF1078_RS11020 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase low > 61
Bacteroides stercoris CC31F 0.41 HMPREF1181_RS09075 mechanosensitive ion channel 0.25 HMPREF1181_RS05290 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase low > 56
Bacteroides thetaiotaomicron VPI-5482 0.41 BT4053 putative membrane transport protein (NCBI ptt file) 0.25 BT2387 O-acetylhomoserine (thiol)-lyase (NCBI ptt file) low > 81
Alteromonas macleodii MIT1002 0.39 MIT1002_03422 Miniconductance mechanosensitive channel 0.19 MIT1002_02266 Methionine gamma-lyase low > 70
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_4452 Small-conductance mechanosensitive channel 0.30 PfGW456L13_3934 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) low > 87
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_18300 mechanosensitive ion channel protein MscS 0.38 AO353_23295 cystathionine beta-lyase low > 101
Pseudomonas sp. DMC3 0.39 GFF2354 Miniconductance mechanosensitive channel YbdG 0.38 GFF3060 Cystathionine beta-lyase low > 89
Acinetobacter radioresistens SK82 0.39 MPMX26_01489 Miniconductance mechanosensitive channel YbdG 0.32 MPMX26_01645 O-succinylhomoserine sulfhydrylase — —
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_3803 MscS Mechanosensitive ion channel 0.30 Psyr_1669 O-succinylhomoserine sulfhydrylase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_3803 MscS Mechanosensitive ion channel 0.30 Psyr_1669 O-succinylhomoserine sulfhydrylase low > 86
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS22200 mechanosensitive ion channel family protein 0.36 PFLU_RS16625 cystathionine gamma-synthase low > 109
Pseudomonas fluorescens SBW25 0.38 PFLU_RS22200 mechanosensitive ion channel family protein 0.36 PFLU_RS16625 cystathionine gamma-synthase low > 109
Pseudomonas sp. BP01 0.38 JOY50_RS01235 mechanosensitive ion channel family protein 0.34 JOY50_RS01570 PLP-dependent aspartate aminotransferase family protein low > 84
Pseudomonas putida KT2440 0.38 PP_4533 mechanosensitive channel of miniconductance 0.34 PP_4594 putative Cystathionine gamma-synthase low > 96
Pseudomonas sp. SVBP6 0.38 COO64_RS21935 mechanosensitive ion channel family protein 0.37 COO64_RS14890 cystathionine gamma-synthase low > 93
Pseudomonas fluorescens FW300-N1B4 0.38 Pf1N1B4_544 Small-conductance mechanosensitive channel 0.38 Pf1N1B4_4890 Cystathionine gamma-lyase (EC 4.4.1.1) low > 87
Pseudomonas sp. RS175 0.38 PFR28_00755 Miniconductance mechanosensitive channel YbdG 0.30 PFR28_02810 O-succinylhomoserine sulfhydrylase low > 88
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_04215 mechanosensitive ion channel protein MscS 0.30 AO356_21470 O-succinylhomoserine sulfhydrylase low > 104
Pontibacter actiniarum KMM 6156, DSM 19842 0.37 CA264_02745 mechanosensitive ion channel protein MscS 0.37 CA264_20315 cystathionine gamma-synthase low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.37 CA265_RS15985 mechanosensitive ion channel protein MscS 0.37 CA265_RS06375 cystathionine gamma-synthase low > 88
Castellaniella sp019104865 MT123 0.37 ABCV34_RS03055 mechanosensitive ion channel domain-containing protein 0.30 ABCV34_RS15785 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme low > 48
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_2677 Small-conductance mechanosensitive channel 0.30 Pf6N2E2_77 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) 0.22 80
Phocaeicola dorei CL03T12C01 0.36 ABI39_RS01685 mechanosensitive ion channel 0.26 ABI39_RS13825 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase low > 72
Pseudomonas aeruginosa PA14 0.36 IKLFDK_17800 mechanosensitive ion channel protein MscS 0.37 IKLFDK_23420 cystathionine gamma-synthase low > 101
Phocaeicola vulgatus CL09T03C04 0.36 HMPREF1058_RS02435 mechanosensitive ion channel 0.26 HMPREF1058_RS17635 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 0.36 6
Cellulophaga baltica 18 0.33 M666_RS16035 mechanosensitive ion channel 0.39 M666_RS03785 cystathionine gamma-synthase low > 67
Burkholderia phytofirmans PsJN 0.27 BPHYT_RS30840 small mechanosensitive ion channel protein MscS 0.26 BPHYT_RS33835 O-succinylhomoserine sulfhydrylase low > 109
Paraburkholderia sabiae LMG 24235 0.26 QEN71_RS37970 mechanosensitive ion channel 0.25 QEN71_RS17685 O-succinylhomoserine sulfhydrylase low > 153

Not shown: 0 genomes with orthologs for CSW01_01370 only; 52 genomes with orthologs for CSW01_13550 only