Conservation of cofitness between CSW01_03145 and CSW01_10080 in Vibrio cholerae E7946 ATCC 55056

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03145 polynucleotide adenylyltransferase PcnB 1.0 CSW01_10080 4-amino-4-deoxychorismate lyase 0.56 6
Enterobacter asburiae PDN3 0.57 EX28DRAFT_3732 poly(A) polymerase 0.33 EX28DRAFT_1833 aminodeoxychorismate lyase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF89 Poly(A) polymerase (EC 2.7.7.19) 0.29 GFF3378 Aminodeoxychorismate lyase (EC 4.1.3.38) low > 78
Dickeya dianthicola ME23 0.57 DZA65_RS17145 polynucleotide adenylyltransferase PcnB 0.32 DZA65_RS13640 aminodeoxychorismate lyase low > 75
Enterobacter sp. TBS_079 0.56 MPMX20_00829 Poly(A) polymerase I 0.28 MPMX20_01776 Aminodeoxychorismate lyase low > 85
Dickeya dadantii 3937 0.56 DDA3937_RS15945 polynucleotide adenylyltransferase PcnB 0.32 DDA3937_RS23255 aminodeoxychorismate lyase low > 74
Klebsiella michiganensis M5al 0.56 BWI76_RS05005 polynucleotide adenylyltransferase 0.32 BWI76_RS11105 aminodeoxychorismate lyase low > 92
Serratia liquefaciens MT49 0.56 IAI46_21220 polynucleotide adenylyltransferase PcnB 0.33 IAI46_09805 aminodeoxychorismate lyase low > 86
Escherichia fergusonii Becca 0.56 EFB2_03901 Poly(A) polymerase I 0.33 EFB2_02879 Aminodeoxychorismate lyase low > 86
Dickeya dianthicola 67-19 0.56 HGI48_RS16060 polynucleotide adenylyltransferase PcnB 0.33 HGI48_RS13170 aminodeoxychorismate lyase low > 71
Escherichia coli ECRC101 0.56 MCAODC_00870 pcnB polynucleotide adenylyltransferase PcnB 0.33 MCAODC_22920 pabC aminodeoxychorismate lyase low > 87
Escherichia coli ECRC99 0.56 KEDOAH_17800 pcnB polynucleotide adenylyltransferase PcnB 0.33 KEDOAH_24195 pabC aminodeoxychorismate lyase — —
Escherichia coli ECRC100 0.56 OKFHMN_10355 pcnB polynucleotide adenylyltransferase PcnB 0.33 OKFHMN_03560 pabC aminodeoxychorismate lyase low > 80
Escherichia coli ECRC98 0.56 JDDGAC_13950 pcnB polynucleotide adenylyltransferase PcnB 0.33 JDDGAC_07220 pabC aminodeoxychorismate lyase low > 86
Escherichia coli BW25113 0.56 b0143 pcnB poly(A) polymerase I (VIMSS) 0.33 b1096 pabC 4-amino-4-deoxychorismate lyase (NCBI) low > 76
Escherichia coli BL21 0.56 ECD_00142 poly(A) polymerase 0.33 ECD_01092 4-amino-4-deoxychorismate lyase component of para-aminobenzoate synthase multienzyme complex — —
Escherichia coli Nissle 1917 0.56 ECOLIN_RS00790 polynucleotide adenylyltransferase PcnB 0.33 ECOLIN_RS06330 aminodeoxychorismate lyase low > 55
Escherichia coli ECOR38 0.56 HEPCGN_08305 pcnB polynucleotide adenylyltransferase PcnB 0.32 HEPCGN_23920 pabC aminodeoxychorismate lyase low > 87
Escherichia coli ECRC102 0.56 NIAGMN_08205 pcnB polynucleotide adenylyltransferase PcnB 0.33 NIAGMN_24270 pabC aminodeoxychorismate lyase — —
Escherichia coli ECOR27 0.56 NOLOHH_02700 pcnB polynucleotide adenylyltransferase PcnB 0.33 NOLOHH_21090 pabC aminodeoxychorismate lyase — —
Escherichia coli ECRC62 0.56 BNILDI_08970 pcnB polynucleotide adenylyltransferase PcnB 0.33 BNILDI_19250 pabC aminodeoxychorismate lyase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.56 OHPLBJKB_03519 Poly(A) polymerase I 0.33 OHPLBJKB_02570 Aminodeoxychorismate lyase low > 73
Pantoea sp. MT58 0.56 IAI47_15645 polynucleotide adenylyltransferase PcnB 0.30 IAI47_12055 aminodeoxychorismate lyase low > 76
Pectobacterium carotovorum WPP14 0.54 HER17_RS05570 polynucleotide adenylyltransferase PcnB 0.33 HER17_RS08665 aminodeoxychorismate lyase low > 75
Erwinia amylovora T8 0.54 OLJFJH_00775 polynucleotide adenylyltransferase PcnB 0.32 OLJFJH_15515 aminodeoxychorismate lyase low > 58
Erwinia tracheiphila SCR3 0.53 LU632_RS20090 pcnB polynucleotide adenylyltransferase PcnB 0.33 LU632_RS14805 pabC aminodeoxychorismate lyase low > 74
Alteromonas macleodii MIT1002 0.52 MIT1002_03692 Poly(A) polymerase I precursor 0.29 MIT1002_01736 Aminodeoxychorismate lyase low > 70
Shewanella oneidensis MR-1 0.52 SO0872 pcnB polyA polymerase (NCBI ptt file) 0.29 SO2615 pabC 4-amino-4-deoxychorismate lyase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.52 Shew_3131 poly(A) polymerase (RefSeq) 0.26 Shew_1577 aminotransferase, class IV (RefSeq) low > 60
Shewanella sp. ANA-3 0.52 Shewana3_3406 poly(A) polymerase (RefSeq) 0.28 Shewana3_1764 aminodeoxychorismate lyase apoprotein (RefSeq) — —
Kangiella aquimarina DSM 16071 0.48 B158DRAFT_0058 poly(A) polymerase 0.22 B158DRAFT_1750 aminodeoxychorismate lyase low > 40
Pseudomonas sp. SVBP6 0.46 COO64_RS15095 polynucleotide adenylyltransferase PcnB 0.25 COO64_RS05790 pabC aminodeoxychorismate lyase low > 93
Pseudomonas sp. DMC3 0.45 GFF4029 Poly(A) polymerase I 0.26 GFF4754 Aminodeoxychorismate lyase low > 89
Pseudomonas putida KT2440 0.45 PP_4697 poly(A) polymerase 0.23 PP_1917 4-amino-4-deoxychorismate lyase low > 96
Pseudomonas sp. BP01 0.45 JOY50_RS27670 polynucleotide adenylyltransferase PcnB 0.24 JOY50_RS16775 pabC aminodeoxychorismate lyase low > 84
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_0830 Poly(A) polymerase 0.25 Psyr_1650 aminodeoxychorismate lyase apoprotein low > 86
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_0830 Poly(A) polymerase 0.25 Psyr_1650 aminodeoxychorismate lyase apoprotein low > 86
Pseudomonas simiae WCS417 0.45 PS417_23900 poly(A) polymerase 0.25 PS417_21425 4-amino-4-deoxychorismate lyase low > 88
Pseudomonas sp. RS175 0.45 PFR28_03719 Poly(A) polymerase I 0.26 PFR28_03007 Aminodeoxychorismate lyase low > 88
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS25740 polynucleotide adenylyltransferase PcnB 0.26 PFLU_RS23040 aminodeoxychorismate lyase low > 109
Pseudomonas fluorescens SBW25 0.44 PFLU_RS25740 polynucleotide adenylyltransferase PcnB 0.26 PFLU_RS23040 aminodeoxychorismate lyase low > 109
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_14395 poly(A) polymerase 0.24 AO353_01350 4-amino-4-deoxychorismate lyase low > 101
Pseudomonas sp. S08-1 0.44 OH686_17255 Poly(A) polymerase 0.28 OH686_22155 aminodeoxychorismate lyase low > 80
Pseudomonas fluorescens GW456-L13 0.44 PfGW456L13_1523 Poly(A) polymerase (EC 2.7.7.19) 0.26 PfGW456L13_2108 Aminodeoxychorismate lyase (EC 4.1.3.38) low > 87
Marinobacter adhaerens HP15 0.44 HP15_326 polyA polymerase 0.17 HP15_2209 4-amino-4-deoxychorismate lyase 0.63 15
Pseudomonas aeruginosa PA14 0.44 IKLFDK_29965 polynucleotide adenylyltransferase PcnB 0.28 IKLFDK_15080 aminodeoxychorismate lyase — —
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_5155 Poly(A) polymerase (EC 2.7.7.19) 0.25 Pf6N2E2_5955 Aminodeoxychorismate lyase (EC 4.1.3.38) 0.34 86
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_16070 poly(A) polymerase 0.26 AO356_20180 4-amino-4-deoxychorismate lyase low > 104
Pseudomonas fluorescens FW300-N1B4 0.44 Pf1N1B4_2856 Poly(A) polymerase (EC 2.7.7.19) 0.24 Pf1N1B4_448 Aminodeoxychorismate lyase (EC 4.1.3.38) low > 87
Dyella japonica UNC79MFTsu3.2 0.43 ABZR86_RS00805 polynucleotide adenylyltransferase PcnB 0.24 ABZR86_RS06150 aminodeoxychorismate lyase low > 74
Lysobacter sp. OAE881 0.43 ABIE51_RS08015 polynucleotide adenylyltransferase PcnB 0.25 ABIE51_RS13925 aminodeoxychorismate lyase low > 62
Rhodanobacter sp. FW510-T8 0.43 OKGIIK_03875 pcnB tRNA nucleotidyltransferase/poly(A) polymerase 0.25 OKGIIK_05735 pabC aminodeoxychorismate lyase low > 52
Rhodanobacter sp000427505 FW510-R12 0.42 LRK53_RS13510 polynucleotide adenylyltransferase PcnB 0.28 LRK53_RS08905 aminodeoxychorismate lyase low > 60
Rhodanobacter denitrificans FW104-10B01 0.42 LRK54_RS15105 polynucleotide adenylyltransferase PcnB 0.26 LRK54_RS01165 aminodeoxychorismate lyase low > 59
Rhodanobacter denitrificans MT42 0.42 LRK55_RS14820 polynucleotide adenylyltransferase PcnB 0.26 LRK55_RS00940 aminodeoxychorismate lyase low > 63
Pseudomonas stutzeri RCH2 0.41 Psest_0998 poly(A) polymerase 0.27 Psest_1691 aminodeoxychorismate lyase low > 67
Methylophilus sp. DMC18 0.37 GFF2604 Poly(A) polymerase I 0.29 GFF627 Aminodeoxychorismate lyase low > 43

Not shown: 15 genomes with orthologs for CSW01_03145 only; 11 genomes with orthologs for CSW01_10080 only