Conservation of cofitness between CSW01_01005 and CSW01_08010 in Vibrio cholerae E7946 ATCC 55056

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01005 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 1.0 CSW01_08010 MFS transporter 0.43 18
Rahnella sp. WP5 0.65 EX31_RS05170 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.23 EX31_RS05285 MFS transporter low > 89
Enterobacter asburiae PDN3 0.65 EX28DRAFT_4062 Protein involved in catabolism of external DNA 0.13 EX28DRAFT_0728 Major Facilitator Superfamily low > 76
Enterobacter sp. TBS_079 0.64 MPMX20_04398 Ribosomal RNA large subunit methyltransferase J 0.23 MPMX20_00062 Multidrug resistance protein 3 low > 85
Klebsiella pneumoniae MKP103 0.64 KDGMDA_07435 Ribosomal RNA large subunit methyltransferase J 0.23 KDGMDA_08315 EmrB/QacA family drug resistance transporter low > 95
Klebsiella michiganensis M5al 0.64 BWI76_RS26680 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.23 BWI76_RS27675 EmrB/QacA family drug resistance transporter low > 92
Erwinia amylovora T8 0.63 OLJFJH_04555 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.18 OLJFJH_14265 MFS transporter low > 58
Serratia liquefaciens MT49 0.63 IAI46_24235 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.25 IAI46_12720 MFS transporter low > 87
Pectobacterium carotovorum WPP14 0.62 HER17_RS21245 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.18 HER17_RS10725 MFS transporter low > 75
Erwinia tracheiphila SCR3 0.62 LU632_RS19485 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.13 LU632_RS13235 MFS transporter low > 73
Erwinia tracheiphila HP pepo 2.2 0.62 IJEDHG_12575 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.13 IJEDHG_22350 Multidrug MFS transporter low > 61
Pantoea sp. MT58 0.61 IAI47_01340 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.18 IAI47_09785 MFS transporter low > 76
Pantoea agglomerans CFBP13505 P0401 0.61 PagCFBP13505_RS17840 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.18 PagCFBP13505_RS06370 MFS transporter low > 74
Shewanella sp. ANA-3 0.49 Shewana3_4038 hypothetical protein (RefSeq) 0.46 Shewana3_0064 major facilitator transporter (RefSeq) low > 73
Azospirillum brasilense Sp245 0.48 AZOBR_RS21900 lactate dehydrogenase 0.25 AZOBR_RS10785 transporter low > 97
Azospirillum sp. SherDot2 0.46 MPMX19_01202 Ribosomal RNA large subunit methyltransferase J 0.23 MPMX19_00797 Multidrug resistance protein 3 low > 112
Pseudomonas putida KT2440 0.44 PP_4945 23S rRNA m(6)A2030 methyltransferase 0.27 PP_1388 Drug resistance transporter, EmrB/QacA family low > 96
Pseudomonas aeruginosa MRSN321 0.43 DY961_RS10910 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.27 DY961_RS27500 MDR family MFS transporter low > 100
Pseudomonas aeruginosa PUPa3 0.43 DQ20_RS51160 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.27 DQ20_RS32050 MDR family MFS transporter low > 101
Pseudomonas aeruginosa PA14 0.43 IKLFDK_28440 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.27 IKLFDK_24350 MFS transporter low > 98
Agrobacterium fabrum C58 0.43 Atu1135 hypothetical protein 0.21 Atu0838 MFS permease low > 89
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS04360 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.23 ABZR87_RS18795 MDR family MFS transporter low > 80
Pseudomonas stutzeri RCH2 0.42 Psest_0408 Protein involved in catabolism of external DNA 0.14 Psest_0847 drug resistance transporter, EmrB/QacA subfamily low > 67
Pseudomonas sp. SVBP6 0.42 COO64_RS17660 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.26 COO64_RS26260 MDR family MFS transporter low > 93
Rhizobium sp. OAE497 0.41 ABIE40_RS06520 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.22 ABIE40_RS18620 MDR family MFS transporter low > 107
Herbaspirillum seropedicae SmR1 0.41 HSERO_RS10595 competence protein ComJ 0.19 HSERO_RS09275 DSBA oxidoreductase low > 78
Pseudomonas sp. BP01 0.41 JOY50_RS09970 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.26 JOY50_RS14460 MDR family MFS transporter low > 84
Paraburkholderia sabiae LMG 24235 0.41 QEN71_RS23895 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.23 QEN71_RS07930 MDR family MFS transporter low > 153
Ralstonia solanacearum PSI07 0.41 RPSI07_RS08205 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.22 RPSI07_RS05785 MFS transporter low > 81
Ralstonia solanacearum GMI1000 0.40 RS_RS16875 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.22 RS_RS23200 MFS transporter 0.27 62
Pseudomonas sp. DMC3 0.40 GFF3149 Ribosomal RNA large subunit methyltransferase J 0.25 GFF5056 Multidrug resistance protein 3 low > 89
Burkholderia phytofirmans PsJN 0.40 BPHYT_RS06880 competence protein ComJ 0.23 BPHYT_RS24280 DSBA oxidoreductase low > 109
Cupriavidus basilensis FW507-4G11 0.40 RR42_RS09005 competence protein ComJ 0.23 RR42_RS00325 MFS transporter low > 128
Pseudomonas sp. RS175 0.39 PFR28_05056 Ribosomal RNA large subunit methyltransferase J 0.26 PFR28_00544 Putative multidrug resistance protein MdtD low > 88
Pseudomonas lactucae CFBP13502 0.39 GEMAOFIL_00676 Ribosomal RNA large subunit methyltransferase J 0.27 GEMAOFIL_01605 Multidrug resistance protein 3 low > 96
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_4772 Protein of unknown function DUF519 0.23 Psyr_4004 Drug resistance transporter EmrB/QacA subfamily low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_4772 Protein of unknown function DUF519 0.23 Psyr_4004 Drug resistance transporter EmrB/QacA subfamily low > 86
Pseudomonas fluorescens FW300-N1B4 0.38 Pf1N1B4_1481 Protein involved in catabolism of external DNA 0.25 Pf1N1B4_704 drug resistance transporter, EmrB/QacA family low > 87
Pseudomonas fluorescens FW300-N2E2 0.38 Pf6N2E2_3679 Protein involved in catabolism of external DNA 0.25 Pf6N2E2_2915 drug resistance transporter, EmrB/QacA family low > 103
Pseudomonas orientalis W4I3 0.38 QF045_RS05260 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.27 QF045_RS09995 MDR family MFS transporter low > 93
Pseudomonas fluorescens SBW25 0.38 PFLU_RS02255 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.27 PFLU_RS07440 MFS transporter low > 109
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_08990 lactate dehydrogenase 0.25 AO356_05300 disulfide bond formation protein DsbA low > 104
Pseudomonas simiae WCS417 0.38 PS417_02200 lactate dehydrogenase 0.27 PS417_07335 DSBA oxidoreductase — —
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_219 Protein involved in catabolism of external DNA 0.26 PfGW456L13_1786 drug resistance transporter, EmrB/QacA family low > 87
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_12840 lactate dehydrogenase 0.26 AO353_03900 disulfide bond formation protein DsbA low > 101
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS02255 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.27 PFLU_RS07440 MFS transporter low > 109
Rhodanobacter sp000427505 FW510-R12 0.38 LRK53_RS08040 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.12 LRK53_RS11570 MFS transporter low > 59
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS21180 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.13 ABZR86_RS01865 MFS transporter low > 74
Bosea sp. OAE506 0.37 ABIE41_RS11490 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.23 ABIE41_RS01910 MDR family MFS transporter low > 77
Rhodanobacter sp. FW510-T8 0.36 OKGIIK_04560 rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.12 OKGIIK_07515 MFS transporter low > 53
Hydrogenophaga sp. GW460-11-11-14-LB1 0.33 GFF1683 Protein involved in catabolism of external DNA 0.13 GFF189 MFS permease low > 90
Xanthobacter sp. DMC5 0.32 GFF4654 Ribosomal RNA large subunit methyltransferase J 0.21 GFF935 Multidrug resistance protein 3 — —
Variovorax sp. SCN45 0.31 GFF2057 23S rRNA (adenine(2030)-N(6))-methyltransferase (EC 2.1.1.266) 0.22 GFF136 Uncharacterized MFS-type transporter low > 127
Brevundimonas sp. GW460-12-10-14-LB2 0.22 A4249_RS02525 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.12 A4249_RS05645 MFS transporter low > 48

Not shown: 45 genomes with orthologs for CSW01_01005 only; 3 genomes with orthologs for CSW01_08010 only