Conservation of cofitness between CSW01_03430 and CSW01_05645 in Vibrio cholerae E7946 ATCC 55056

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03430 U32 family peptidase 1.0 CSW01_05645 biotin synthase 0.47 9
Rahnella sp. WP5 0.68 EX31_RS08485 U32 family peptidase 0.69 EX31_RS23695 biotin synthase BioB low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF1509 FIG139928: Putative protease 0.70 GFF671 Biotin synthase (EC 2.8.1.6) low > 78
Dickeya dadantii 3937 0.67 DDA3937_RS03110 U32 family peptidase 0.71 DDA3937_RS08510 biotin synthase BioB low > 74
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_00541 hypothetical protein 0.70 OHPLBJKB_02938 Biotin synthase low > 74
Escherichia fergusonii Becca 0.67 EFB2_00664 hypothetical protein 0.69 EFB2_03330 Biotin synthase low > 86
Escherichia coli Nissle 1917 0.67 ECOLIN_RS18145 U32 family peptidase 0.69 ECOLIN_RS04130 biotin synthase BioB low > 55
Escherichia coli ECOR38 0.67 HEPCGN_17045 rlhA U32 family peptidase 0.70 HEPCGN_01640 bioB biotin synthase BioB low > 88
Dickeya dianthicola 67-19 0.67 HGI48_RS03285 U32 family peptidase 0.71 HGI48_RS08675 biotin synthase BioB low > 71
Escherichia coli BL21 0.67 ECD_03026 U32 peptidase family protein 0.70 ECD_00742 biotin synthase low > 61
Escherichia coli ECRC99 0.67 KEDOAH_09980 rlhA U32 family peptidase 0.69 KEDOAH_21510 bioB biotin synthase BioB — —
Escherichia coli ECRC100 0.67 OKFHMN_18170 rlhA U32 family peptidase 0.69 OKFHMN_06400 bioB biotin synthase BioB low > 79
Escherichia coli ECRC62 0.67 BNILDI_01560 rlhA U32 family peptidase 0.70 BNILDI_21040 bioB biotin synthase BioB low > 75
Escherichia coli ECRC102 0.67 NIAGMN_15930 rlhA U32 family peptidase 0.69 NIAGMN_04445 bioB biotin synthase BioB low > 80
Escherichia coli BW25113 0.67 b3159 yhbV orf, hypothetical protein (VIMSS) 0.70 b0775 bioB biotin synthase (NCBI) low > 76
Escherichia coli ECRC101 0.67 MCAODC_08690 rlhA U32 family peptidase 0.69 MCAODC_25615 bioB biotin synthase BioB low > 88
Escherichia coli ECRC98 0.67 JDDGAC_21795 rlhA U32 family peptidase 0.69 JDDGAC_10035 bioB biotin synthase BioB low > 87
Serratia liquefaciens MT49 0.66 IAI46_02010 U32 family peptidase 0.69 IAI46_06525 biotin synthase BioB 0.43 54
Escherichia coli ECOR27 0.66 NOLOHH_09970 rlhA U32 family peptidase 0.70 NOLOHH_22770 bioB biotin synthase BioB low > 76
Dickeya dianthicola ME23 0.66 DZA65_RS03280 U32 family peptidase 0.70 DZA65_RS08965 biotin synthase BioB low > 75
Klebsiella pneumoniae MKP103 0.66 KDGMDA_05845 U32 family peptidase 0.70 KDGMDA_17025 biotin synthase BioB low > 95
Klebsiella michiganensis M5al 0.65 BWI76_RS24975 U32 family peptidase 0.69 BWI76_RS08760 biotin synthase low > 92
Enterobacter asburiae PDN3 0.65 EX28DRAFT_3208 Collagenase and related proteases 0.70 EX28DRAFT_2216 biotin synthase (EC 2.8.1.6) low > 76
Pectobacterium carotovorum WPP14 0.65 HER17_RS18165 U32 family peptidase 0.69 HER17_RS13460 biotin synthase BioB low > 75
Enterobacter sp. TBS_079 0.64 MPMX20_04063 hypothetical protein 0.69 MPMX20_01403 Biotin synthase low > 85
Pantoea sp. MT58 0.63 IAI47_16970 U32 family peptidase 0.70 IAI47_13530 biotin synthase BioB low > 76
Pantoea agglomerans CFBP13505 P0401 0.63 PagCFBP13505_RS09065 U32 family peptidase 0.69 PagCFBP13505_RS03770 biotin synthase BioB low > 74
Erwinia tracheiphila SCR3 0.60 LU632_RS21010 U32 family peptidase 0.71 LU632_RS09130 bioB biotin synthase BioB — —
Erwinia tracheiphila HP pepo 2.2 0.60 IJEDHG_14000 U32 family peptidase 0.71 IJEDHG_19565 bioB biotin synthase BioB — —
Pseudomonas sp. SVBP6 0.47 COO64_RS14195 U32 family peptidase 0.69 COO64_RS22725 bioB biotin synthase BioB low > 93
Pseudomonas lactucae CFBP13502 0.47 GEMAOFIL_03432 hypothetical protein 0.68 GEMAOFIL_05322 Biotin synthase low > 93
Pseudomonas sp. RS175 0.46 PFR28_02213 hypothetical protein 0.69 PFR28_04103 Biotin synthase low > 88
Pseudomonas simiae WCS417 0.46 PS417_15750 protease 0.68 PS417_26005 biotin synthase 0.18 26
Shewanella loihica PV-4 0.46 Shew_2788 peptidase U32 (RefSeq) 0.63 Shew_1719 biotin synthase (RefSeq) — —
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_25165 protease 0.69 AO356_14135 biotin synthase low > 104
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_722 FIG139928: Putative protease 0.69 Pf6N2E2_4759 Biotin synthase (EC 2.8.1.6) low > 103
Shewanella oneidensis MR-1 0.44 SO1248 hypothetical peptidase (NCBI ptt file) 0.65 SO2740 bioB biotin synthase (NCBI ptt file) — —
Shewanella sp. ANA-3 0.44 Shewana3_1064 peptidase U32 (RefSeq) 0.65 Shewana3_2519 biotin synthase (RefSeq) low > 73
Pseudomonas aeruginosa PA14 0.44 IKLFDK_20170 U32 family peptidase 0.70 IKLFDK_22935 biotin synthase BioB low > 100
Pseudomonas fluorescens FW300-N1B4 0.44 Pf1N1B4_5745 FIG139928: Putative protease 0.69 Pf1N1B4_2487 Biotin synthase (EC 2.8.1.6) low > 87
Pseudomonas stutzeri RCH2 0.44 Psest_0836 Collagenase and related proteases 0.70 Psest_0411 biotin synthetase low > 67
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_22055 protease 0.69 AO353_07525 biotin synthase low > 101
Shewanella amazonensis SB2B 0.41 Sama_0997 peptidase U32 (RefSeq) 0.66 Sama_1438 biotin synthase (RefSeq) — —
Kangiella aquimarina DSM 16071 0.39 B158DRAFT_2374 Collagenase and related proteases 0.65 B158DRAFT_0864 biotin synthase (EC 2.8.1.6) — —
Dechlorosoma suillum PS 0.38 Dsui_0963 collagenase-like protease 0.53 Dsui_1297 biotin synthetase low > 51
Castellaniella sp019104865 MT123 0.38 ABCV34_RS06415 U32 family peptidase 0.56 ABCV34_RS15280 biotin synthase BioB low > 48
Acidovorax sp. GW101-3H11 0.38 Ac3H11_4295 FIG139928: Putative protease 0.55 Ac3H11_2272 Biotin synthase (EC 2.8.1.6) low > 79
Ralstonia solanacearum IBSBF1503 0.37 RALBFv3_RS16700 U32 family peptidase 0.58 RALBFv3_RS10465 biotin synthase BioB low > 76
Ralstonia solanacearum UW163 0.37 UW163_RS18055 U32 family peptidase 0.58 UW163_RS03115 biotin synthase BioB — —
Ralstonia solanacearum GMI1000 0.36 RS_RS21790 U32 family peptidase 0.59 RS_RS01305 biotin synthase low > 80
Ralstonia solanacearum PSI07 0.35 RPSI07_RS06745 U32 family peptidase 0.59 RPSI07_RS22850 biotin synthase BioB low > 81
Cupriavidus basilensis FW507-4G11 0.34 RR42_RS08780 protease 0.56 RR42_RS00940 biotin synthase low > 128

Not shown: 3 genomes with orthologs for CSW01_03430 only; 58 genomes with orthologs for CSW01_05645 only