Conservation of cofitness between CSW01_06280 and CSW01_04820 in Vibrio cholerae E7946 ATCC 55056

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06280 succinylglutamate desuccinylase 1.0 CSW01_04820 serine hydroxymethyltransferase 0.76 4
Shewanella loihica PV-4 0.28 Shew_1924 succinylglutamate desuccinylase (RefSeq) 0.81 Shew_1185 glyA serine hydroxymethyltransferase (RefSeq) — —
Shewanella amazonensis SB2B 0.28 Sama_1708 succinylglutamate desuccinylase (RefSeq) 0.82 Sama_1014 glyA serine hydroxymethyltransferase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.27 SO2338 astE succinylglutamate desuccinylase (NCBI ptt file) 0.83 SO3471 glyA serine hydroxymethyltransferase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.27 Shewana3_2132 succinylglutamate desuccinylase (RefSeq) 0.83 Shewana3_1094 glyA serine hydroxymethyltransferase (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.26 MIT1002_01538 Succinylglutamate desuccinylase 0.73 MIT1002_02702 Serine hydroxymethyltransferase — —
Kangiella aquimarina DSM 16071 0.26 B158DRAFT_1551 succinylglutamate desuccinylase (EC 3.5.1.96) 0.72 B158DRAFT_1908 Glycine/serine hydroxymethyltransferase — —
Pseudomonas segetis P6 0.25 MPMX49_03201 Succinylglutamate desuccinylase 0.74 MPMX49_03979 Serine hydroxymethyltransferase — —
Paraburkholderia sabiae LMG 24235 0.25 QEN71_RS23350 succinylglutamate desuccinylase 0.70 QEN71_RS33600 serine hydroxymethyltransferase low > 153
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.25 GFF3496 Succinylglutamate desuccinylase (EC 3.5.1.96) 0.79 GFF2447 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.25 Psyr_3559 succinylglutamate desuccinylase 0.75 Psyr_4270 serine hydroxymethyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.25 Psyr_3559 succinylglutamate desuccinylase 0.75 Psyr_4270 serine hydroxymethyltransferase low > 86
Erwinia amylovora T8 0.25 OLJFJH_14785 succinylglutamate desuccinylase 0.79 OLJFJH_10340 Serine hydroxymethyltransferase — —
Pseudomonas aeruginosa PA14 0.25 IKLFDK_04015 succinylglutamate desuccinylase 0.73 IKLFDK_00500 Serine hydroxymethyltransferase 3 — —
Pseudomonas aeruginosa PUPa3 0.25 DQ20_RS44835 astE;go_function=succinylglutamate succinylglutamate desuccinylase 0.74 DQ20_RS55885 glyA;go_function=glycine serine hydroxymethyltransferase — —
Pseudomonas aeruginosa MRSN321 0.25 DY961_RS07965 astE;go_function=succinylglutamate succinylglutamate desuccinylase 0.74 DY961_RS23420 glyA;go_function=glycine serine hydroxymethyltransferase low > 100
Escherichia coli ECRC100 0.24 OKFHMN_26925 astE succinylglutamate desuccinylase 0.79 OKFHMN_21510 glyA serine hydroxymethyltransferase low > 79
Escherichia coli HS(pFamp)R (ATCC 700891) 0.24 OHPLBJKB_01988 Succinylglutamate desuccinylase 0.79 OHPLBJKB_01156 Serine hydroxymethyltransferase low > 74
Pseudomonas fluorescens FW300-N2E3 0.24 AO353_02995 succinylglutamate desuccinylase 0.74 AO353_14020 serine hydroxymethyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.24 Pf6N2E2_5671 Succinylglutamate desuccinylase (EC 3.5.1.96) 0.75 Pf6N2E2_5082 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Enterobacter asburiae PDN3 0.24 EX28DRAFT_1748 succinylglutamate desuccinylase (EC 3.5.1.96) 0.79 EX28DRAFT_0099 Glycine/serine hydroxymethyltransferase — —
Escherichia coli ECRC98 0.24 JDDGAC_01500 astE succinylglutamate desuccinylase 0.79 JDDGAC_25175 glyA serine hydroxymethyltransferase — —
Escherichia coli Nissle 1917 0.24 ECOLIN_RS09725 succinylglutamate desuccinylase 0.79 ECOLIN_RS14440 serine hydroxymethyltransferase — —
Escherichia coli ECOR27 0.24 NOLOHH_17440 astE succinylglutamate desuccinylase 0.79 NOLOHH_13185 glyA serine hydroxymethyltransferase low > 76
Escherichia coli ECRC99 0.24 KEDOAH_01185 astE succinylglutamate desuccinylase 0.79 KEDOAH_06710 glyA serine hydroxymethyltransferase — —
Escherichia coli ECRC101 0.24 MCAODC_18485 astE succinylglutamate desuccinylase 0.79 MCAODC_12040 glyA serine hydroxymethyltransferase — —
Escherichia coli ECRC102 0.24 NIAGMN_01140 astE succinylglutamate desuccinylase 0.79 NIAGMN_19280 glyA serine hydroxymethyltransferase low > 80
Escherichia coli BW25113 0.24 b1744 astE succinylglutamate desuccinylase (NCBI) 0.79 b2551 glyA serine hydroxymethyltransferase (NCBI) — —
Escherichia coli BL21 0.24 ECD_01713 succinylglutamate desuccinylase 0.79 ECD_02443 serine hydroxymethyltransferase low > 61
Pseudomonas fluorescens FW300-N2C3 0.24 AO356_18755 succinylglutamate desuccinylase 0.74 AO356_15725 serine hydroxymethyltransferase — —
Pseudomonas sp. RS175 0.24 PFR28_03277 Succinylglutamate desuccinylase 0.75 PFR28_03786 Serine hydroxymethyltransferase — —
Pseudomonas sp. S08-1 0.24 OH686_21320 succinylglutamate desuccinylase 0.74 OH686_16230 Serine hydroxymethyltransferase — —
Escherichia fergusonii Becca 0.24 EFB2_02249 Succinylglutamate desuccinylase 0.79 EFB2_01345 Serine hydroxymethyltransferase — —
Escherichia coli ECOR38 0.24 HEPCGN_05290 astE succinylglutamate desuccinylase 0.79 HEPCGN_20655 glyA serine hydroxymethyltransferase low > 88
Pseudomonas fluorescens GW456-L13 0.24 PfGW456L13_1977 Succinylglutamate desuccinylase (EC 3.5.1.96) (from data) 0.74 PfGW456L13_1451 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Pseudomonas sp. BP01 0.24 JOY50_RS00950 astE succinylglutamate desuccinylase 0.74 JOY50_RS24625 glyA serine hydroxymethyltransferase — —
Pseudomonas putida KT2440 0.24 PP_4475 succinylglutamate desuccinylase 0.74 PP_0671 serine hydroxymethyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.24 H281DRAFT_06483 succinylglutamate desuccinylase 0.63 H281DRAFT_04726 serine hydroxymethyltransferase — —
Escherichia coli ECRC62 0.24 BNILDI_16225 astE succinylglutamate desuccinylase 0.79 BNILDI_11985 glyA serine hydroxymethyltransferase low > 75
Klebsiella michiganensis M5al 0.24 BWI76_RS11690 succinylglutamate desuccinylase 0.79 BWI76_RS21225 serine hydroxymethyltransferase — —
Enterobacter sp. TBS_079 0.24 MPMX20_01869 Succinylglutamate desuccinylase 0.79 MPMX20_03420 Serine hydroxymethyltransferase — —
Pseudomonas sp. SVBP6 0.24 COO64_RS21585 astE succinylglutamate desuccinylase 0.74 COO64_RS02995 glyA serine hydroxymethyltransferase — —
Burkholderia phytofirmans PsJN 0.24 BPHYT_RS07720 Succinylglutamate desuccinylase (EC 3.5.1.96) (from data) 0.63 BPHYT_RS03725 serine hydroxymethyltransferase low > 109
Pantoea sp. MT58 0.24 IAI47_11075 succinylglutamate desuccinylase 0.81 IAI47_04960 serine hydroxymethyltransferase — —
Pseudomonas fluorescens FW300-N1B4 0.24 Pf1N1B4_3447 Succinylglutamate desuccinylase (EC 3.5.1.96) 0.74 Pf1N1B4_2778 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Klebsiella pneumoniae MKP103 0.24 KDGMDA_19370 succinylglutamate desuccinylase 0.79 KDGMDA_28355 Serine hydroxymethyltransferase low > 95
Pantoea agglomerans CFBP13505 P0401 0.24 PagCFBP13505_RS17520 succinylglutamate desuccinylase 0.81 PagCFBP13505_RS14850 serine hydroxymethyltransferase — —
Pseudomonas lactucae CFBP13502 0.23 GEMAOFIL_04479 Succinylglutamate desuccinylase 0.74 GEMAOFIL_05008 Serine hydroxymethyltransferase — —
Paraburkholderia graminis OAS925 0.23 ABIE53_001774 succinylglutamate desuccinylase 0.63 ABIE53_000888 glycine hydroxymethyltransferase — —
Pseudomonas sp. DMC3 0.23 GFF4873 Succinylglutamate desuccinylase 0.74 GFF3963 Serine hydroxymethyltransferase — —
Pseudomonas simiae WCS417 0.23 PS417_21680 succinylglutamate desuccinylase 0.74 PS417_24280 serine hydroxymethyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.23 PFLU_RS23285 succinylglutamate desuccinylase 0.74 PFLU_RS26195 serine hydroxymethyltransferase — —
Pseudomonas fluorescens SBW25 0.23 PFLU_RS23285 succinylglutamate desuccinylase 0.74 PFLU_RS26195 serine hydroxymethyltransferase — —
Rahnella sp. WP5 0.23 EX31_RS17390 succinylglutamate desuccinylase 0.80 EX31_RS20585 serine hydroxymethyltransferase — —
Pseudomonas orientalis W4I3 0.23 QF045_RS23785 succinylglutamate desuccinylase 0.75 QF045_RS26575 serine hydroxymethyltransferase — —
Acinetobacter radioresistens SK82 0.22 MPMX26_02247 Succinylglutamate desuccinylase 0.71 MPMX26_02049 Serine hydroxymethyltransferase — —
Serratia liquefaciens MT49 0.22 IAI46_15315 succinylglutamate desuccinylase 0.81 IAI46_19395 serine hydroxymethyltransferase — —
Marinobacter adhaerens HP15 0.21 HP15_3034 succinylglutamate desuccinylase 0.74 HP15_489 glycine hydroxymethyltransferase — —
Acinetobacter baumannii LAC-4 0.20 RR41_RS01880 succinylglutamate desuccinylase 0.70 RR41_RS06055 serine hydroxymethyltransferase — —
Pseudomonas stutzeri RCH2 0.18 Psest_2717 Succinylglutamate desuccinylase 0.74 Psest_3404 Glycine/serine hydroxymethyltransferase — —

Not shown: 0 genomes with orthologs for CSW01_06280 only; 40 genomes with orthologs for CSW01_04820 only