Conservation of cofitness between CSW01_18820 and CSW01_03435 in Vibrio cholerae E7946 ATCC 55056

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_18820 EamA/RhaT family transporter 1.0 CSW01_03435 protease 0.57 19
Shewanella oneidensis MR-1 0.42 SO1091 membrane protein, putative (NCBI ptt file) 0.62 SO1249 peptidase, U32 family (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.41 Shewana3_0924 hypothetical protein (RefSeq) 0.62 Shewana3_1065 peptidase U32 (RefSeq) low > 73
Agrobacterium fabrum C58 0.39 Atu5339 hypothetical protein 0.41 Atu4397 protease — —
Ralstonia solanacearum PSI07 0.39 RPSI07_RS07660 EamA/RhaT family transporter 0.53 RPSI07_RS06750 U32 family peptidase low > 81
Serratia liquefaciens MT49 0.39 IAI46_17860 DMT family transporter 0.71 IAI46_02015 U32 family peptidase low > 87
Ralstonia solanacearum UW163 0.38 UW163_RS16730 EamA/RhaT family transporter 0.53 UW163_RS18050 protease — —
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS23480 EamA/RhaT family transporter 0.53 RALBFv3_RS16695 protease low > 76
Cupriavidus basilensis FW507-4G11 0.38 RR42_RS35080 membrane protein 0.49 RR42_RS08775 protease low > 128
Pectobacterium carotovorum WPP14 0.38 HER17_RS06975 DMT family transporter 0.74 HER17_RS18160 U32 family peptidase low > 75
Ralstonia solanacearum GMI1000 0.37 RS_RS24970 EamA/RhaT family transporter 0.49 RS_RS21795 U32 family peptidase low > 80
Pantoea agglomerans CFBP13505 P0401 0.37 PagCFBP13505_RS00180 DMT family transporter 0.71 PagCFBP13505_RS09060 U32 family peptidase low > 74
Pantoea sp. MT58 0.37 IAI47_06225 DMT family transporter 0.72 IAI47_16965 U32 family peptidase low > 76
Rahnella sp. WP5 0.36 EX31_RS19620 DMT family transporter 0.74 EX31_RS08480 U32 family peptidase low > 89
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_13445 hypothetical protein 0.64 AO353_22050 protease low > 101
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_1363 Permease of the drug/metabolite transporter (DMT) superfamily 0.63 Pf1N1B4_5746 FIG139552: Putative protease low > 87
Pseudomonas aeruginosa MRSN321 0.33 DY961_RS25070 DMT family transporter 0.65 DY961_RS13305 peptidase U32 family protein low > 100
Pseudomonas sp. SVBP6 0.33 COO64_RS18100 DMT family transporter 0.64 COO64_RS14190 peptidase U32 family protein low > 93
Pseudomonas aeruginosa PUPa3 0.33 DQ20_RS57525 DMT family transporter 0.65 DQ20_RS48610 peptidase U32 family protein low > 101
Pseudomonas aeruginosa PA14 0.33 IKLFDK_02675 EamA family transporter 0.65 IKLFDK_20175 protease low > 98
Pseudomonas lactucae CFBP13502 0.32 GEMAOFIL_00785 hypothetical protein 0.63 GEMAOFIL_03433 putative protease YhbU low > 96
Pseudomonas simiae WCS417 0.27 PS417_02755 membrane protein 0.62 PS417_15755 protease low > 88
Sinorhizobium meliloti 1021 0.22 SMc00642 hypothetical protein 0.42 SMa1291 Protease low > 103
Rhodopseudomonas palustris CGA009 0.21 TX73_022275 DMT family transporter 0.46 TX73_004810 U32 family peptidase — —
Pseudomonas stutzeri RCH2 0.20 Psest_1063 Predicted permease, DMT superfamily 0.65 Psest_0835 Collagenase and related proteases low > 67
Azospirillum sp. SherDot2 0.19 MPMX19_00219 hypothetical protein 0.45 MPMX19_03049 putative protease YhbU low > 112
Dechlorosoma suillum PS 0.19 Dsui_2817 DMT(drug/metabolite transporter) superfamily permease 0.60 Dsui_0962 collagenase-like protease low > 51
Rhodospirillum rubrum S1H 0.19 Rru_A2900 Protein of unknown function DUF6, transmembrane (NCBI) 0.43 Rru_A2525 Peptidase U32 (NCBI) low > 58
Azospirillum brasilense Sp245 0.18 AZOBR_RS02730 multidrug DMT transporter permease 0.45 AZOBR_RS28235 protease low > 97
Acidovorax sp. GW101-3H11 0.15 Ac3H11_1724 Permeases of the drug/metabolite transporter (DMT) superfamily 0.57 Ac3H11_4294 FIG139552: Putative protease low > 79
Castellaniella sp019104865 MT123 0.14 ABCV34_RS05010 DMT family transporter 0.63 ABCV34_RS06420 peptidase U32 family protein low > 48
Klebsiella michiganensis M5al 0.13 BWI76_RS10350 EamA family transporter 0.75 BWI76_RS24970 peptidase U32 low > 92
Klebsiella pneumoniae MKP103 0.13 KDGMDA_22215 EamA/RhaT family transporter 0.75 KDGMDA_05840 protease low > 95
Pseudomonas fluorescens FW300-N2C3 0.10 AO356_22840 multidrug transporter 0.63 AO356_25160 protease low > 104
Kangiella aquimarina DSM 16071 0.10 B158DRAFT_0155 Permeases of the drug/metabolite transporter (DMT) superfamily 0.59 B158DRAFT_2375 Collagenase and related proteases low > 40
Shewanella loihica PV-4 0.10 Shew_0694 hypothetical protein (RefSeq) 0.62 Shew_2787 peptidase U32 (RefSeq) low > 60
Pseudomonas sp. RS175 0.10 PFR28_02476 putative amino-acid metabolite efflux pump 0.63 PFR28_02214 putative protease YhbU low > 88
Pseudomonas fluorescens FW300-N2E2 0.10 Pf6N2E2_455 Permease of the drug/metabolite transporter (DMT) superfamily 0.63 Pf6N2E2_721 FIG139552: Putative protease low > 103
Magnetospirillum magneticum AMB-1 0.09 AMB_RS04225 EamA/RhaT family transporter 0.46 AMB_RS02530 U32 family peptidase low > 64

Not shown: 36 genomes with orthologs for CSW01_18820 only; 22 genomes with orthologs for CSW01_03435 only