Conservation of cofitness between CSW01_01825 and CSW01_03435 in Vibrio cholerae E7946 ATCC 55056

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01825 DNA mismatch repair protein MutL 1.0 CSW01_03435 protease 0.54 7
Pantoea sp. MT58 0.46 IAI47_02580 DNA mismatch repair endonuclease MutL 0.72 IAI47_16965 U32 family peptidase low > 76
Erwinia tracheiphila SCR3 0.46 LU632_RS02045 mutL DNA mismatch repair endonuclease MutL 0.72 LU632_RS21005 U32 family peptidase low > 74
Dickeya dadantii 3937 0.45 DDA3937_RS18620 DNA mismatch repair endonuclease MutL 0.73 DDA3937_RS03115 U32 family peptidase low > 74
Serratia liquefaciens MT49 0.45 IAI46_01615 DNA mismatch repair endonuclease MutL 0.71 IAI46_02015 U32 family peptidase low > 86
Pectobacterium carotovorum WPP14 0.44 HER17_RS02575 DNA mismatch repair endonuclease MutL 0.74 HER17_RS18160 U32 family peptidase low > 75
Dickeya dianthicola ME23 0.44 DZA65_RS19690 DNA mismatch repair endonuclease MutL 0.73 DZA65_RS03285 U32 family peptidase low > 75
Dickeya dianthicola 67-19 0.44 HGI48_RS18555 DNA mismatch repair endonuclease MutL 0.73 HGI48_RS03290 U32 family peptidase low > 71
Enterobacter sp. TBS_079 0.44 MPMX20_00451 DNA mismatch repair protein MutL 0.72 MPMX20_04062 putative protease YhbU low > 85
Enterobacter asburiae PDN3 0.44 EX28DRAFT_3367 DNA mismatch repair protein MutL 0.72 EX28DRAFT_3207 Collagenase and related proteases low > 76
Rahnella sp. WP5 0.44 EX31_RS08830 DNA mismatch repair endonuclease MutL 0.74 EX31_RS08480 U32 family peptidase low > 89
Escherichia fergusonii Becca 0.44 EFB2_04365 DNA mismatch repair protein MutL 0.74 EFB2_00665 putative protease YhbU low > 86
Klebsiella michiganensis M5al 0.44 BWI76_RS02525 DNA mismatch repair protein MutL 0.75 BWI76_RS24970 peptidase U32 low > 92
Escherichia coli BL21 0.44 ECD_04037 methyl-directed mismatch repair protein 0.74 ECD_03025 U32 peptidase family protein low > 61
Escherichia coli BW25113 0.44 b4170 mutL DNA mismatch repair protein (NCBI) 0.74 b3158 yhbU predicted peptidase (collagenase-like) (NCBI) low > 76
Escherichia coli ECRC102 0.43 NIAGMN_10115 mutL DNA mismatch repair endonuclease MutL 0.74 NIAGMN_15935 ubiU Ubiquinone biosynthesis protein UbiU — —
Escherichia coli ECOR27 0.43 NOLOHH_04530 mutL DNA mismatch repair endonuclease MutL 0.74 NOLOHH_09975 ubiU Ubiquinone biosynthesis protein UbiU low > 75
Escherichia coli ECRC62 0.43 BNILDI_06960 mutL DNA mismatch repair endonuclease MutL 0.74 BNILDI_01555 ubiU Ubiquinone biosynthesis protein UbiU low > 75
Escherichia coli Nissle 1917 0.43 ECOLIN_RS24220 DNA mismatch repair endonuclease MutL 0.74 ECOLIN_RS18140 peptidase U32 family protein low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_03872 DNA mismatch repair protein MutL 0.74 OHPLBJKB_00542 putative protease YhbU low > 73
Escherichia coli ECOR38 0.43 HEPCGN_10495 mutL DNA mismatch repair endonuclease MutL 0.74 HEPCGN_17050 protease low > 87
Escherichia coli ECRC101 0.43 MCAODC_02780 mutL DNA mismatch repair endonuclease MutL 0.74 MCAODC_08695 protease low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF823 DNA mismatch repair protein MutL 0.74 GFF1510 FIG139552: Putative protease low > 78
Escherichia coli ECRC99 0.43 KEDOAH_15890 mutL DNA mismatch repair endonuclease MutL 0.74 KEDOAH_09975 protease — —
Escherichia coli ECRC98 0.43 JDDGAC_15905 mutL DNA mismatch repair endonuclease MutL 0.74 JDDGAC_21800 protease low > 86
Escherichia coli ECRC100 0.43 OKFHMN_12265 mutL DNA mismatch repair endonuclease MutL 0.74 OKFHMN_18175 protease low > 80
Shewanella loihica PV-4 0.37 Shew_0564 DNA mismatch repair protein MutL (RefSeq) 0.62 Shew_2787 peptidase U32 (RefSeq) low > 60
Shewanella sp. ANA-3 0.37 Shewana3_0595 mutL DNA mismatch repair protein (RefSeq) 0.62 Shewana3_1065 peptidase U32 (RefSeq) low > 73
Shewanella oneidensis MR-1 0.37 SO0601 mutL DNA mismatch repair protein MutL (NCBI ptt file) 0.62 SO1249 peptidase, U32 family (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.36 Sama_3027 mutL DNA mismatch repair protein (RefSeq) 0.60 Sama_0998 U32 family peptidase (RefSeq) low > 62
Pseudomonas simiae WCS417 0.35 PS417_02480 DNA mismatch repair protein 0.62 PS417_15755 protease low > 88
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_3616 DNA mismatch repair protein MutL 0.63 Pf6N2E2_721 FIG139552: Putative protease low > 103
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_1414 DNA mismatch repair protein MutL 0.63 Pf1N1B4_5746 FIG139552: Putative protease low > 87
Pseudomonas sp. RS175 0.34 PFR28_05119 DNA mismatch repair protein MutL 0.63 PFR28_02214 putative protease YhbU low > 88
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_13135 DNA mismatch repair protein 0.64 AO353_22050 protease low > 101
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_08665 DNA mismatch repair protein 0.63 AO356_25160 protease low > 104
Pseudomonas aeruginosa PA14 0.32 IKLFDK_28810 DNA mismatch repair endonuclease MutL 0.65 IKLFDK_20175 protease low > 101
Ralstonia solanacearum UW163 0.27 UW163_RS08395 DNA mismatch repair endonuclease MutL 0.53 UW163_RS18050 protease — —
Ralstonia solanacearum IBSBF1503 0.27 RALBFv3_RS05230 DNA mismatch repair endonuclease MutL 0.53 RALBFv3_RS16695 protease low > 76
Ralstonia solanacearum GMI1000 0.27 RS_RS12850 DNA mismatch repair protein MutL 0.49 RS_RS21795 U32 family peptidase low > 80
Dechlorosoma suillum PS 0.27 Dsui_1551 DNA mismatch repair protein MutL 0.60 Dsui_0962 collagenase-like protease low > 51
Ralstonia solanacearum PSI07 0.26 RPSI07_RS12070 DNA mismatch repair endonuclease MutL 0.53 RPSI07_RS06750 U32 family peptidase low > 81
Acidovorax sp. GW101-3H11 0.23 Ac3H11_313 DNA mismatch repair protein MutL 0.57 Ac3H11_4294 FIG139552: Putative protease low > 79
Castellaniella sp019104865 MT123 0.22 ABCV34_RS08785 DNA mismatch repair endonuclease MutL 0.63 ABCV34_RS06420 peptidase U32 family protein low > 48
Rhodopseudomonas palustris CGA009 0.21 TX73_022655 DNA mismatch repair endonuclease MutL 0.46 TX73_004810 U32 family peptidase — —
Rhodospirillum rubrum S1H 0.21 Rru_A2946 DNA mismatch repair protein (NCBI) 0.43 Rru_A2525 Peptidase U32 (NCBI) low > 58
Sinorhizobium meliloti 1021 0.19 SMc00932 DNA mismatch repair protein 0.42 SMa1291 Protease low > 103
Agrobacterium fabrum C58 0.19 Atu0699 DNA mismatch repair protein MutL 0.41 Atu4397 protease low > 89

Not shown: 48 genomes with orthologs for CSW01_01825 only; 7 genomes with orthologs for CSW01_03435 only