Conservation of cofitness between CSW01_01485 and CSW01_03210 in Vibrio cholerae E7946 ATCC 55056

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01485 transcriptional regulator 1.0 CSW01_03210 iron ABC transporter permease 0.97 2
Dickeya dianthicola ME23 0.55 DZA65_RS20970 gluconate operon transcriptional repressor GntR 0.26 DZA65_RS17205 iron ABC transporter permease low > 75
Dickeya dadantii 3937 0.55 DDA3937_RS19785 gluconate operon transcriptional repressor GntR 0.26 DDA3937_RS16000 iron ABC transporter permease low > 74
Dickeya dianthicola 67-19 0.55 HGI48_RS19900 gluconate operon transcriptional repressor GntR 0.26 HGI48_RS16120 iron ABC transporter permease low > 71
Erwinia tracheiphila HP pepo 2.2 0.54 IJEDHG_08040 gntR gluconate operon transcriptional repressor GntR 0.07 IJEDHG_05515 Iron ABC transporter permease low > 61
Rahnella sp. WP5 0.54 EX31_RS05060 gluconate operon transcriptional repressor GntR 0.28 EX31_RS17575 iron ABC transporter permease low > 89
Erwinia tracheiphila SCR3 0.53 LU632_RS19160 gntR gluconate operon transcriptional repressor GntR 0.07 LU632_RS03340 iron ABC transporter permease low > 73
Pectobacterium carotovorum WPP14 0.52 HER17_RS01450 gluconate operon transcriptional repressor GntR 0.33 HER17_RS05515 iron ABC transporter permease low > 75
Enterobacter sp. TBS_079 0.52 MPMX20_04319 HTH-type transcriptional regulator GntR 0.08 MPMX20_01120 hypothetical protein low > 85
Klebsiella michiganensis M5al 0.51 BWI76_RS26245 transcriptional regulator 0.07 BWI76_RS10475 binding-protein-dependent transport system inner membrane protein low > 92
Enterobacter asburiae PDN3 0.51 EX28DRAFT_4274 transcriptional regulator, LacI family 0.08 EX28DRAFT_2436 ABC-type Fe3+ transport system, permease component low > 76
Pseudomonas aeruginosa PA14 0.36 IKLFDK_11375 LacI family DNA-binding transcriptional regulator GntR 0.28 IKLFDK_27390 iron ABC transporter permease low > 98
Pseudomonas aeruginosa MRSN321 0.36 DY961_RS17990 gntR;inference=COORDINATES LacI family DNA-binding transcriptional regulator GntR 0.28 DY961_RS11950 iron ABC transporter permease low > 100
Pseudomonas aeruginosa PUPa3 0.36 DQ20_RS59230 gntR;inference=COORDINATES LacI family DNA-binding transcriptional regulator GntR 0.27 DQ20_RS50165 iron ABC transporter permease low > 101
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_558 Gluconate utilization system Gnt-I transcriptional repressor 0.32 Pf1N1B4_2233 Ferric iron ABC transporter, permease protein low > 87
Pseudomonas fluorescens SBW25-INTG 0.34 PFLU_RS23595 LacI family DNA-binding transcriptional regulator 0.32 PFLU_RS28920 iron ABC transporter permease low > 109
Pseudomonas stutzeri RCH2 0.34 Psest_2126 Transcriptional regulators 0.27 Psest_0180 ABC-type Fe3+ transport system, permease component
Pseudomonas fluorescens SBW25 0.34 PFLU_RS23595 LacI family DNA-binding transcriptional regulator 0.32 PFLU_RS28920 iron ABC transporter permease low > 109
Pseudomonas lactucae CFBP13502 0.34 GEMAOFIL_04536 HTH-type transcriptional regulator GntR 0.32 GEMAOFIL_05590 hypothetical protein low > 96
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_1925 Gluconate utilization system Gnt-I transcriptional repressor 0.29 PfGW456L13_901 Ferric iron ABC transporter, permease protein low > 87
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_2865 Gluconate utilization system Gnt-I transcriptional repressor 0.32 Pf6N2E2_4484 Ferric iron ABC transporter, permease protein low > 103
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_05065 LacI family transcriptional regulator 0.32 AO356_13030 iron ABC transporter permease low > 104
Pseudomonas sp. RS175 0.34 PFR28_00593 HTH-type transcriptional regulator GntR 0.31 PFR28_04317 hypothetical protein low > 88
Herbaspirillum seropedicae SmR1 0.34 HSERO_RS05460 LacI family transcription regulator 0.24 HSERO_RS16585 iron ABC transporter permease low > 78
Pseudomonas orientalis W4I3 0.34 QF045_RS24095 LacI family DNA-binding transcriptional regulator 0.33 QF045_RS01630 iron ABC transporter permease low > 93
Pseudomonas sp. SVBP6 0.34 COO64_RS25590 LacI family DNA-binding transcriptional regulator 0.30 COO64_RS00965 iron ABC transporter permease low > 93
Pseudomonas simiae WCS417 0.33 PS417_21990 LacI family transcriptional regulator 0.31 PS417_27260 iron ABC transporter permease low > 88
Pseudomonas sp. DMC3 0.33 GFF5268 HTH-type transcriptional regulator GntR 0.30 GFF311 hypothetical protein low > 89
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_03255 LacI family transcriptional regulator 0.32 AO353_08740 iron ABC transporter permease low > 101
Pseudomonas segetis P6 0.33 ACVTMO_RS11810 gntR HTH-type transcriptional regulator GntR 0.32 ACVTMO_RS22240 ABC transporter permease low > 75
Burkholderia phytofirmans PsJN 0.32 BPHYT_RS00410 LacI family transcription regulator 0.12 BPHYT_RS23965 iron ABC transporter permease low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.32 Psyr_3336 transcriptional regulator, LacI family 0.30 Psyr_0245 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas syringae pv. syringae B728a 0.32 Psyr_3336 transcriptional regulator, LacI family 0.30 Psyr_0245 Binding-protein-dependent transport systems inner membrane component low > 86
Alteromonas macleodii MIT1002 0.31 MIT1002_03475 Gluconate utilization system GNT-I transcriptional repressor 0.12 MIT1002_00116 Spermidine/putrescine transport system permease protein PotB low > 70
Azospirillum brasilense Sp245 0.31 AZOBR_RS15720 LacI family transcription regulator 0.39 AZOBR_RS03155 iron ABC transporter permease
Pseudomonas sp. BP01 0.31 JOY50_RS23605 LacI family DNA-binding transcriptional regulator 0.30 JOY50_RS22420 ABC transporter permease low > 84
Pseudomonas putida KT2440 0.31 PP_3415 Transcriptional regulator, LacI family 0.29 PP_5195 putative Iron ABC transporter, permease protein low > 96
Xanthobacter sp. DMC5 0.31 GFF1533 HTH-type transcriptional regulator GntR 0.31 GFF360 hypothetical protein
Hydrogenophaga sp. GW460-11-11-14-LB1 0.30 GFF5509 Gluconate utilization system Gnt-I transcriptional repressor 0.27 GFF663 Ferric iron ABC transporter, permease protein low > 90
Variovorax sp. SCN45 0.30 GFF7257 KEGG: LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor 0.28 GFF6761 Ferric iron ABC transporter, permease protein low > 127
Sinorhizobium meliloti 1021 0.29 SM_b20667 LacI family transcriptional regulator 0.36 SMc00775 iron(III) permease low > 103
Azospirillum sp. SherDot2 0.29 MPMX19_05332 HTH-type transcriptional regulator GntR 0.29 MPMX19_01379 hypothetical protein low > 112
Acidovorax sp. GW101-3H11 0.29 Ac3H11_3230 Gluconate utilization system Gnt-I transcriptional repressor 0.30 Ac3H11_3971 Ferric iron ABC transporter, permease protein low > 79
Variovorax sp. OAS795 0.29 ABID97_RS01205 LacI family DNA-binding transcriptional regulator 0.29 ABID97_RS21260 iron ABC transporter permease low > 91
Phaeobacter inhibens DSM 17395 0.28 PGA1_c33870 putative HTH-type transcriptional regulator GntR 0.35 PGA1_c32540 putative Fe(3+)-transport system protein SfuB low > 62
Agrobacterium fabrum C58 0.28 Atu4685 LacI family transcriptional regulator 0.38 Atu0613 ABC transporter, membrane spanning protein low > 89
Dinoroseobacter shibae DFL-12 0.27 Dshi_3322 transcriptional regulator, LacI family (RefSeq) 0.36 Dshi_2023 binding-protein-dependent transport systems inner membrane component (RefSeq)
Castellaniella sp019104865 MT123 0.26 ABCV34_RS12285 LacI family DNA-binding transcriptional regulator 0.30 ABCV34_RS03550 iron ABC transporter permease
Cupriavidus basilensis FW507-4G11 0.26 RR42_RS22645 GntR family transcriptional regulator 0.36 RR42_RS04345 iron ABC transporter permease low > 128
Rhizobium sp. OAE497 0.25 ABIE40_RS04445 LacI family DNA-binding transcriptional regulator 0.30 ABIE40_RS21705 iron ABC transporter permease low > 107

Not shown: 26 genomes with orthologs for CSW01_01485 only; 13 genomes with orthologs for CSW01_03210 only