Conservation of cofitness between CSW01_04590 and CSW01_02210 in Vibrio cholerae E7946 ATCC 55056

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04590 transcriptional regulator GcvA 1.0 CSW01_02210 DUF3971 domain-containing protein 0.60 6
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF4865 Glycine cleavage system transcriptional activator GcvA 0.19 GFF2139 FIG005080: Possible exported protein low > 78
Serratia liquefaciens MT49 0.72 IAI46_20340 transcriptional regulator GcvA 0.21 IAI46_22695 AsmA2 domain-containing protein YhdP low > 86
Rahnella sp. WP5 0.72 EX31_RS13110 transcriptional regulator GcvA 0.21 EX31_RS12260 AsmA2 domain-containing protein low > 89
Erwinia amylovora T8 0.72 OLJFJH_09170 Glycine cleavage system transcriptional activator 0.19 OLJFJH_06935 DUF3971 domain-containing protein low > 58
Escherichia coli ECRC98 0.72 JDDGAC_23785 gcvA glycine cleavage system transcriptional regulator GcvA 0.17 JDDGAC_21375 yhdP AsmA2 domain-containing protein YhdP low > 86
Escherichia coli ECRC99 0.72 KEDOAH_08010 gcvA glycine cleavage system transcriptional regulator GcvA 0.17 KEDOAH_10400 yhdP AsmA2 domain-containing protein YhdP — —
Escherichia coli BL21 0.72 ECD_02659 glycine cleavage system transcriptional activator; autorepressor 0.17 ECD_03105 DUF3971-AsmA2 domains protein low > 61
Escherichia coli ECOR27 0.72 NOLOHH_12000 gcvA glycine cleavage system transcriptional regulator GcvA 0.18 NOLOHH_09535 yhdP AsmA2 domain-containing protein YhdP low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_00923 Glycine cleavage system transcriptional activator 0.18 OHPLBJKB_00459 hypothetical protein 0.37 48
Escherichia coli ECRC62 0.72 BNILDI_10505 gcvA glycine cleavage system transcriptional regulator GcvA 0.18 BNILDI_01985 yhdP AsmA2 domain-containing protein YhdP low > 75
Escherichia coli ECRC102 0.72 NIAGMN_17890 gcvA glycine cleavage system transcriptional regulator GcvA 0.17 NIAGMN_15510 yhdP AsmA2 domain-containing protein YhdP — —
Escherichia coli ECRC101 0.72 MCAODC_10645 gcvA glycine cleavage system transcriptional regulator GcvA 0.17 MCAODC_08270 yhdP AsmA2 domain-containing protein YhdP low > 87
Escherichia coli BW25113 0.72 b2808 gcvA DNA-binding transcriptional dual regulator (NCBI) 0.18 b4472 yhdP conserved membrane protein, predicted transporter (NCBI) low > 76
Escherichia coli ECOR38 0.72 HEPCGN_19375 gcvA glycine cleavage system transcriptional regulator GcvA 0.18 HEPCGN_16615 yhdP AsmA2 domain-containing protein YhdP low > 87
Escherichia fergusonii Becca 0.72 EFB2_01109 Glycine cleavage system transcriptional activator 0.18 EFB2_00585 hypothetical protein low > 86
Escherichia coli ECRC100 0.72 OKFHMN_20120 gcvA glycine cleavage system transcriptional regulator GcvA 0.17 OKFHMN_17750 yhdP AsmA2 domain-containing protein YhdP low > 80
Escherichia coli Nissle 1917 0.72 ECOLIN_RS15650 glycine cleavage system transcriptional regulator GcvA 0.18 ECOLIN_RS18600 AsmA2 domain-containing protein YhdP 0.66 17
Erwinia tracheiphila SCR3 0.71 LU632_RS06255 transcriptional regulator GcvA 0.20 LU632_RS21425 yhdP AsmA2 domain-containing protein YhdP 0.45 18
Enterobacter sp. TBS_079 0.71 MPMX20_03671 Glycine cleavage system transcriptional activator 0.19 MPMX20_04152 hypothetical protein low > 85
Klebsiella michiganensis M5al 0.71 BWI76_RS22955 transcriptional regulator GcvA 0.19 BWI76_RS25475 TIGR02099 family protein low > 92
Dickeya dadantii 3937 0.71 DDA3937_RS05050 transcriptional regulator GcvA 0.20 DDA3937_RS01455 AsmA2 domain-containing protein YhdP 0.50 49
Pantoea sp. MT58 0.71 IAI47_04025 transcriptional regulator GcvA 0.21 IAI47_02460 AsmA2 domain-containing protein YhdP low > 76
Enterobacter asburiae PDN3 0.71 EX28DRAFT_2883 Transcriptional regulator 0.19 EX28DRAFT_3296 TIGR02099 family protein low > 76
Dickeya dianthicola ME23 0.71 DZA65_RS05390 transcriptional regulator GcvA 0.20 DZA65_RS01435 AsmA2 domain-containing protein low > 75
Shewanella sp. ANA-3 0.71 Shewana3_2894 DNA-binding transcriptional activator GcvA (RefSeq) 0.19 Shewana3_3643 hypothetical protein (RefSeq) — —
Dickeya dianthicola 67-19 0.71 HGI48_RS05050 transcriptional regulator GcvA 0.20 HGI48_RS01375 AsmA2 domain-containing protein YhdP low > 71
Pectobacterium carotovorum WPP14 0.71 HER17_RS16415 transcriptional regulator GcvA 0.21 HER17_RS20145 AsmA2 domain-containing protein YhdP low > 75
Shewanella loihica PV-4 0.71 Shew_2764 DNA-binding transcriptional activator GcvA (RefSeq) 0.18 Shew_0408 hypothetical protein (RefSeq) — —
Shewanella oneidensis MR-1 0.70 SO1533 glycine cleavage system transcriptional activator, putative (NCBI ptt file) 0.19 SO4093 conserved hypothetical protein (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.65 MIT1002_01520 Gcv operon activator 0.15 MIT1002_00225 putative protein involved in outer membrane biogenesis low > 70
Kangiella aquimarina DSM 16071 0.53 B158DRAFT_0909 Transcriptional regulator 0.08 B158DRAFT_2070 TIGR02099 family protein low > 40
Pseudomonas fluorescens FW300-N2E2 0.37 Pf6N2E2_1560 Glycine cleavage system transcriptional activator GcvA 0.07 Pf6N2E2_3282 FIG005080: Possible exported protein low > 103
Pseudomonas sp. SVBP6 0.34 COO64_RS14470 gcvA transcriptional regulator GcvA 0.09 COO64_RS04215 YhdP family protein low > 93
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS11810 LysR family transcriptional regulator 0.06 BPHYT_RS03550 hypothetical protein low > 109
Dyella japonica UNC79MFTsu3.2 0.33 ABZR86_RS20860 transcriptional regulator GcvA 0.09 ABZR86_RS21725 YhdP family protein low > 74
Pseudomonas aeruginosa PA14 0.31 IKLFDK_23190 LysR family transcriptional regulator 0.08 IKLFDK_01700 TIGR02099 family protein low > 101
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_15125 LysR family transcriptional regulator 0.07 AO356_07105 hypothetical protein low > 104
Variovorax sp. OAS795 0.31 ABID97_RS29015 transcriptional regulator GcvA 0.08 ABID97_RS02005 YhdP family protein low > 91
Paraburkholderia bryophila 376MFSha3.1 0.31 H281DRAFT_02051 LysR family transcriptional regulator, glycine cleavage system transcriptional activator 0.06 H281DRAFT_04690 TIGR02099 family protein low > 103
Pseudomonas sp. S08-1 0.31 OH686_11695 Transcriptional regulator, LysR family 0.07 OH686_08590 Possible exported protein — —
Pseudomonas sp. BP01 0.30 JOY50_RS09180 LysR family transcriptional regulator 0.07 JOY50_RS11060 YhdP family protein low > 84
Pseudomonas stutzeri RCH2 0.30 Psest_2739 Transcriptional regulator 0.08 Psest_3322 TIGR02099 family protein low > 67
Pseudomonas simiae WCS417 0.30 PS417_23350 LysR family transcriptional regulator 0.08 PS417_04275 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N1B4 0.30 Pf1N1B4_1817 Glycine cleavage system transcriptional activator 0.08 Pf1N1B4_1094 FIG005080: Possible exported protein low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_5015 transcriptional regulator, LysR family 0.08 Psyr_4158 conserved hypothetical protein 0.38 55
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_5015 transcriptional regulator, LysR family 0.08 Psyr_4158 conserved hypothetical protein low > 86
Pseudomonas fluorescens GW456-L13 0.29 PfGW456L13_555 Glycine cleavage system transcriptional activator 0.07 PfGW456L13_5028 FIG005080: Possible exported protein low > 87
Pseudomonas sp. DMC3 0.29 GFF687 Glycine cleavage system transcriptional activator 0.08 GFF1814 hypothetical protein low > 89
Herbaspirillum seropedicae SmR1 0.28 HSERO_RS07925 LysR family transcriptional regulator 0.08 HSERO_RS07145 hypothetical protein low > 78
Dechlorosoma suillum PS 0.27 Dsui_2033 transcriptional regulator 0.08 Dsui_3403 TIGR02099 family protein — —
Xanthomonas campestris pv. campestris strain 8004 0.22 Xcc-8004.1418.1 Glycine cleavage system transcriptional activator 0.05 Xcc-8004.1881.1 FIG005080: Possible exported protein — —

Not shown: 42 genomes with orthologs for CSW01_04590 only; 0 genomes with orthologs for CSW01_02210 only