Conservation of cofitness between CSW01_10410 and CSW01_02205 in Vibrio cholerae E7946 ATCC 55056

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10410 zinc ABC transporter permease 1.0 CSW01_02205 ribonuclease E/G 0.71 8
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF1638 Zinc ABC transporter, inner membrane permease protein ZnuB 0.80 GFF2138 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) low > 78
Klebsiella michiganensis M5al 0.58 BWI76_RS18140 zinc ABC transporter permease 0.81 BWI76_RS25480 ribonuclease E/G low > 92
Klebsiella pneumoniae MKP103 0.58 KDGMDA_25405 zinc ABC transporter permease subunit ZnuB 0.81 KDGMDA_06255 ribonuclease G low > 95
Escherichia coli ECOR27 0.58 NOLOHH_16735 znuB zinc ABC transporter permease subunit ZnuB 0.80 NOLOHH_09530 rng ribonuclease G low > 76
Escherichia fergusonii Becca 0.58 EFB2_02083 High-affinity zinc uptake system membrane protein ZnuB 0.80 EFB2_00584 Ribonuclease G low > 86
Escherichia coli ECRC62 0.58 BNILDI_15525 znuB zinc ABC transporter permease subunit ZnuB 0.80 BNILDI_01990 rng ribonuclease G low > 75
Escherichia coli ECOR38 0.58 HEPCGN_04700 znuB zinc ABC transporter permease subunit ZnuB 0.80 HEPCGN_16610 rng ribonuclease G low > 88
Escherichia coli BL21 0.58 ECD_01830 zinc ABC transporter permease 0.80 ECD_03106 ribonuclease G low > 61
Escherichia coli BW25113 0.58 b1859 znuB high-affinity zinc transporter membrane component (NCBI) 0.80 b3247 cafA bundles of cytoplasmic filaments (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.58 OHPLBJKB_01869 High-affinity zinc uptake system membrane protein ZnuB 0.80 OHPLBJKB_00458 Ribonuclease G low > 74
Escherichia coli Nissle 1917 0.57 ECOLIN_RS10355 zinc ABC transporter permease subunit ZnuB 0.80 ECOLIN_RS18605 ribonuclease G
Enterobacter sp. TBS_079 0.57 MPMX20_02765 High-affinity zinc uptake system membrane protein ZnuB 0.80 MPMX20_04153 Ribonuclease G low > 85
Escherichia coli ECRC100 0.57 OKFHMN_26295 znuB zinc ABC transporter permease subunit ZnuB 0.80 OKFHMN_17745 rng ribonuclease G low > 79
Escherichia coli ECRC98 0.57 JDDGAC_00870 znuB zinc ABC transporter permease subunit ZnuB 0.80 JDDGAC_21370 rng ribonuclease G low > 87
Escherichia coli ECRC99 0.57 KEDOAH_01810 znuB zinc ABC transporter permease subunit ZnuB 0.80 KEDOAH_10405 rng ribonuclease G
Escherichia coli ECRC101 0.57 MCAODC_19110 znuB zinc ABC transporter permease subunit ZnuB 0.80 MCAODC_08265 rng ribonuclease G 0.45 3
Escherichia coli ECRC102 0.57 NIAGMN_01765 znuB zinc ABC transporter permease subunit ZnuB 0.80 NIAGMN_15505 rng ribonuclease G low > 80
Enterobacter asburiae PDN3 0.57 EX28DRAFT_0697 ABC-type Mn2+/Zn2+ transport systems, permease components 0.80 EX28DRAFT_3297 ribonuclease, Rne/Rng family low > 76
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_0278 ABC-3 0.56 Psyr_4159 RNAse G low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_0278 ABC-3 0.56 Psyr_4159 RNAse G low > 86
Marinobacter adhaerens HP15 0.54 HP15_3523 zinc ABC transporter, permease protein 0.57 HP15_2451 ribonuclease, Rne/Rng family
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_600 Zinc ABC transporter, inner membrane permease protein ZnuB 0.57 PfGW456L13_5029 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) low > 87
Pantoea sp. MT58 0.54 IAI47_08455 zinc ABC transporter permease subunit ZnuB 0.78 IAI47_02455 ribonuclease G low > 76
Erwinia tracheiphila SCR3 0.54 LU632_RS13405 znuB zinc ABC transporter permease subunit ZnuB 0.79 LU632_RS21430 rng ribonuclease G
Pantoea agglomerans CFBP13505 P0401 0.54 PagCFBP13505_RS02335 zinc ABC transporter permease subunit ZnuB 0.78 PagCFBP13505_RS11050 ribonuclease G low > 74
Pseudomonas fluorescens FW300-N2E3 0.54 AO353_10900 hypothetical protein 0.56 AO353_05230 ribonuclease G low > 101
Pseudomonas stutzeri RCH2 0.54 Psest_4310 ABC-type Mn2+/Zn2+ transport systems, permease components 0.56 Psest_3323 ribonuclease, Rne/Rng family low > 67
Pseudomonas sp. DMC3 0.53 GFF637 High-affinity zinc uptake system membrane protein ZnuB 0.57 GFF1813 Ribonuclease G low > 89
Pseudomonas segetis P6 0.53 MPMX49_00327 High-affinity zinc uptake system membrane protein ZnuB 0.55 MPMX49_03868 Ribonuclease G low > 75
Serratia liquefaciens MT49 0.53 IAI46_14615 zinc ABC transporter permease subunit ZnuB 0.80 IAI46_22700 ribonuclease G low > 86
Dickeya dianthicola ME23 0.53 DZA65_RS10535 zinc ABC transporter permease subunit ZnuB 0.80 DZA65_RS01430 ribonuclease G low > 75
Rahnella sp. WP5 0.53 EX31_RS10685 zinc ABC transporter permease subunit ZnuB 0.79 EX31_RS12255 ribonuclease G low > 89
Dickeya dianthicola 67-19 0.53 HGI48_RS10120 zinc ABC transporter permease subunit ZnuB 0.80 HGI48_RS01370 ribonuclease G low > 71
Erwinia tracheiphila HP pepo 2.2 0.53 IJEDHG_22145 znuB zinc ABC transporter permease subunit ZnuB 0.79 IJEDHG_13580 rng ribonuclease G
Pseudomonas aeruginosa PA14 0.53 IKLFDK_25905 zinc ABC transporter permease subunit ZnuB 0.57 IKLFDK_01695 ribonuclease G 0.55 63
Pseudomonas fluorescens SBW25 0.52 PFLU_RS00365 zinc ABC transporter permease subunit ZnuB 0.57 PFLU_RS04325 ribonuclease G low > 109
Pseudomonas lactucae CFBP13502 0.52 GEMAOFIL_00278 High-affinity zinc uptake system membrane protein ZnuB 0.57 GEMAOFIL_01059 Ribonuclease G low > 93
Pseudomonas fluorescens SBW25-INTG 0.52 PFLU_RS00365 zinc ABC transporter permease subunit ZnuB 0.57 PFLU_RS04325 ribonuclease G 0.43 6
Pseudomonas sp. RS175 0.52 PFR28_04618 High-affinity zinc uptake system membrane protein ZnuB 0.57 PFR28_00158 Ribonuclease G low > 88
Erwinia amylovora T8 0.52 OLJFJH_12865 zinc ABC transporter permease subunit ZnuB 0.79 OLJFJH_06930 ribonuclease G
Dickeya dadantii 3937 0.52 DDA3937_RS10090 zinc ABC transporter permease subunit ZnuB 0.80 DDA3937_RS01450 ribonuclease G low > 74
Pseudomonas simiae WCS417 0.52 PS417_00375 membrane protein 0.57 PS417_04270 ribonuclease G low > 88
Pectobacterium carotovorum WPP14 0.51 HER17_RS11815 zinc ABC transporter permease subunit ZnuB 0.79 HER17_RS20150 ribonuclease G low > 75
Pseudomonas fluorescens FW300-N2E2 0.50 Pf6N2E2_4168 Zinc ABC transporter, inner membrane permease protein ZnuB 0.57 Pf6N2E2_3283 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) low > 103
Pseudomonas fluorescens FW300-N2C3 0.50 AO356_11495 hypothetical protein 0.57 AO356_07110 ribonuclease G low > 104
Pseudomonas sp. SVBP6 0.50 COO64_RS02445 znuB zinc ABC transporter permease subunit ZnuB 0.56 COO64_RS04210 rng ribonuclease G low > 93
Pseudomonas fluorescens FW300-N1B4 0.50 Pf1N1B4_1869 Zinc ABC transporter, inner membrane permease protein ZnuB 0.57 Pf1N1B4_1095 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) low > 87
Pseudomonas sp. BP01 0.49 JOY50_RS21140 znuB zinc ABC transporter permease subunit ZnuB 0.56 JOY50_RS11055 rng ribonuclease G low > 84
Pseudomonas putida KT2440 0.49 PP_0117 Zn(2+) ABC transporter - permease subunit 0.57 PP_0937 endoribonuclease G (RNAse G) low > 96
Pseudomonas sp. S08-1 0.44 OH686_12250 Zinc ABC transporter, permease protein ZnuB 0.56 OH686_08595 Ribonuclease G low > 80
Acinetobacter baumannii LAC-4 0.31 RR41_RS18190 zinc ABC transporter permease subunit ZnuB 0.53 RR41_RS03605 ribonuclease G low > 55
Acinetobacter radioresistens SK82 0.30 MPMX26_00093 High-affinity zinc uptake system membrane protein ZnuB 0.52 MPMX26_00646 Ribonuclease G low > 36
Fusobacterium nucleatum SB010 0.18 HUW76_00690 metal ABC transporter permease 0.25 HUW76_02260 ribonuclease E/G low > 35
Hydrogenophaga sp. GW460-11-11-14-LB1 0.17 GFF3896 ABC transporter in pyoverdin gene cluster, permease component 0.50 GFF4531 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) low > 90
Parabacteroides merdae CL09T00C40 0.15 HMPREF1078_RS05625 metal ABC transporter permease 0.28 HMPREF1078_RS14165 Rne/Rng family ribonuclease low > 61
Herbaspirillum seropedicae SmR1 0.14 HSERO_RS15875 zinc ABC transporter permease 0.54 HSERO_RS17790 ribonuclease
Burkholderia phytofirmans PsJN 0.12 BPHYT_RS01385 cation ABC transporter permease 0.56 BPHYT_RS06375 ribonuclease low > 109
Castellaniella sp019104865 MT123 0.11 ABCV34_RS13445 metal ABC transporter permease 0.51 ABCV34_RS02480 ribonuclease G low > 48
Paraburkholderia bryophila 376MFSha3.1 0.11 H281DRAFT_04164 zinc/manganese transport system permease protein 0.56 H281DRAFT_04515 RNAse G low > 103
Paraburkholderia graminis OAS925 0.10 ABIE53_003400 zinc/manganese transport system permease protein 0.56 ABIE53_001538 ribonuclease G low > 113

Not shown: 22 genomes with orthologs for CSW01_10410 only; 30 genomes with orthologs for CSW01_02205 only