Conservation of cofitness between CSW01_02460 and CSW01_01980 in Vibrio cholerae E7946 ATCC 55056

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02460 type IV pili twitching motility protein PilT 1.0 CSW01_01980 transcriptional regulator Zur 0.86 14
Acinetobacter baumannii LAC-4 0.73 RR41_RS14800 type IV pilus twitching motility protein PilT 0.31 RR41_RS18180 transcriptional repressor low > 55
Alteromonas macleodii MIT1002 0.72 MIT1002_03060 Twitching mobility protein 0.42 MIT1002_03799 Zinc uptake regulation protein low > 70
Acinetobacter radioresistens SK82 0.72 MPMX26_02405 Twitching mobility protein 0.31 MPMX26_00095 Zinc uptake regulation protein low > 36
Dyella japonica UNC79MFTsu3.2 0.71 ABZR86_RS10420 type IV pilus twitching motility protein PilT 0.37 ABZR86_RS07900 transcriptional repressor low > 74
Xanthomonas campestris pv. campestris strain 8004 0.70 Xcc-8004.1713.1 Twitching motility protein PilT 0.36 Xcc-8004.1790.1 Zinc uptake regulation protein ZUR low > 74
Pseudomonas sp. S08-1 0.70 OH686_10970 Twitching motility protein PilT 0.32 OH686_12240 Zinc uptake regulation protein Zur low > 80
Pseudomonas segetis P6 0.69 MPMX49_00612 Twitching mobility protein 0.32 MPMX49_00325 Zinc uptake regulation protein — —
Pseudomonas fluorescens FW300-N1B4 0.69 Pf1N1B4_2343 Twitching motility protein PilT 0.32 Pf1N1B4_1871 Zinc uptake regulation protein ZUR low > 87
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_4602 Twitching motility protein PilT 0.34 Pf6N2E2_4166 Zinc uptake regulation protein ZUR — —
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_13430 twitching motility protein PilT 0.33 AO356_11485 Fur family transcriptional regulator — —
Pseudomonas sp. DMC3 0.69 GFF208 Twitching mobility protein 0.32 GFF635 Zinc uptake regulation protein low > 89
Pseudomonas stutzeri RCH2 0.69 Psest_0285 pilus retraction protein PilT 0.31 Psest_4308 Fe2+/Zn2+ uptake regulation proteins — —
Rhodanobacter denitrificans FW104-10B01 0.69 LRK54_RS04255 type IV pilus twitching motility protein PilT 0.38 LRK54_RS01640 transcriptional repressor low > 59
Lysobacter sp. OAE881 0.69 ABIE51_RS16055 type IV pilus twitching motility protein PilT 0.37 ABIE51_RS06205 transcriptional repressor — —
Rhodanobacter denitrificans MT42 0.69 LRK55_RS04025 type IV pilus twitching motility protein PilT 0.38 LRK55_RS01420 transcriptional repressor 0.38 51
Pseudomonas sp. RS175 0.69 PFR28_04241 Twitching mobility protein 0.34 PFR28_04620 Zinc uptake regulation protein low > 88
Pseudomonas aeruginosa PA14 0.69 IKLFDK_23445 type IV pilus twitching motility protein PilT 0.33 IKLFDK_25915 zinc uptake transcriptional repressor Zur low > 100
Marinobacter adhaerens HP15 0.68 HP15_289 twitching motility protein PilT 0.30 HP15_3521 zinc uptake regulation protein low > 73
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_1012 Twitching motility protein PilT 0.33 PfGW456L13_598 Zinc uptake regulation protein ZUR low > 87
Pseudomonas fluorescens FW300-N2E3 0.68 AO353_08155 twitching motility protein PilT 0.32 AO353_10910 Fur family transcriptional regulator — —
Pseudomonas syringae pv. syringae B728a 0.67 Psyr_0478 pilus retraction ATPase PilT 0.31 Psyr_0276 zinc uptake regulation protein, putative low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.67 Psyr_0478 pilus retraction ATPase PilT 0.31 Psyr_0276 zinc uptake regulation protein, putative low > 86
Pseudomonas lactucae CFBP13502 0.65 GEMAOFIL_05481 Twitching mobility protein 0.31 GEMAOFIL_00280 Zinc uptake regulation protein — —
Pseudomonas fluorescens SBW25 0.64 PFLU_RS28365 type IV pilus twitching motility protein PilT 0.32 PFLU_RS00375 transcriptional repressor low > 109
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS28365 type IV pilus twitching motility protein PilT 0.32 PFLU_RS00375 transcriptional repressor — —
Pseudomonas simiae WCS417 0.63 PS417_26720 twitching motility protein PilT 0.32 PS417_00385 Fur family transcriptional regulator low > 88
Pseudomonas sp. SVBP6 0.54 COO64_RS13005 type IV pilus twitching motility protein PilT 0.33 COO64_RS02455 zur zinc uptake transcriptional repressor Zur — —
Pseudomonas putida KT2440 0.50 PP_5093 twitching motility protein 0.33 PP_0119 putative zinc uptake regulation protein ZUR low > 96
Pseudomonas sp. BP01 0.50 JOY50_RS20915 type IV pilus twitching motility protein PilT 0.33 JOY50_RS21130 zur zinc uptake transcriptional repressor Zur low > 84
Synechocystis sp000284455 PCC 6803 0.48 SGL_RS12210 type IV pilus twitching motility protein PilT 0.17 SGL_RS08080 Fur family transcriptional regulator low > 52
Pectobacterium carotovorum WPP14 0.48 HER17_RS03815 type IV pilus twitching motility protein PilT 0.48 HER17_RS18780 zinc uptake transcriptional repressor Zur low > 75
Serratia liquefaciens MT49 0.48 IAI46_21405 type IV pilus twitching motility protein PilT 0.45 IAI46_22990 zinc uptake transcriptional repressor Zur low > 86
Dickeya dadantii 3937 0.47 DDA3937_RS17295 type IV pilus twitching motility protein PilT 0.46 DDA3937_RS02765 zinc uptake transcriptional repressor Zur low > 74
Enterobacter sp. TBS_079 0.47 MPMX20_03808 putative protein YggR 0.45 MPMX20_00262 Zinc uptake regulation protein low > 85
Dickeya dianthicola 67-19 0.46 HGI48_RS17340 type IV pilus twitching motility protein PilT 0.45 HGI48_RS02740 zinc uptake transcriptional repressor Zur low > 71
Dickeya dianthicola ME23 0.46 DZA65_RS18430 type IV pilus twitching motility protein PilT 0.45 DZA65_RS02895 zinc uptake transcriptional repressor Zur low > 75
Klebsiella pneumoniae MKP103 0.46 KDGMDA_04610 twitching motility protein PilT 0.44 KDGMDA_10345 zinc uptake transcriptional repressor Zur low > 95
Enterobacter asburiae PDN3 0.45 EX28DRAFT_2988 pilus retraction protein PilT 0.46 EX28DRAFT_4266 Fe2+/Zn2+ uptake regulation proteins low > 76
Escherichia fergusonii Becca 0.45 EFB2_00952 putative protein YggR 0.45 EFB2_04557 Zinc uptake regulation protein low > 86
Escherichia coli ECOR38 0.45 HEPCGN_18565 yggR Uncharacterized protein YggR 0.45 HEPCGN_11570 zur zinc uptake transcriptional repressor Zur low > 88
Escherichia coli Nissle 1917 0.45 ECOLIN_RS16410 type IV pilus twitching motility protein PilT 0.45 ECOLIN_RS23350 zinc uptake transcriptional repressor Zur low > 55
Escherichia coli ECOR27 0.45 NOLOHH_11130 yggR Uncharacterized protein YggR 0.45 NOLOHH_05205 zur zinc uptake transcriptional repressor Zur low > 76
Escherichia coli ECRC62 0.45 BNILDI_09710 yggR Uncharacterized protein YggR 0.45 BNILDI_06315 zur zinc uptake transcriptional repressor Zur low > 75
Escherichia coli BL21 0.45 ECD_02780 putative PilT family AAA+ ATPase 0.45 ECD_03918 transcriptional repressor, Zn(II)-binding low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF3053 Twitching motility protein PilT 0.45 GFF1416 Zinc uptake regulation protein ZUR low > 78
Erwinia tracheiphila HP pepo 2.2 0.45 IJEDHG_03445 type IV pili twitching motility protein PilT 0.47 IJEDHG_08440 zur zinc uptake transcriptional repressor Zur low > 61
Escherichia coli ECRC100 0.45 OKFHMN_19260 yggR Uncharacterized protein YggR 0.45 OKFHMN_13050 zur zinc uptake transcriptional repressor Zur low > 79
Escherichia coli ECRC101 0.45 MCAODC_09780 yggR Uncharacterized protein YggR 0.45 MCAODC_03550 zur zinc uptake transcriptional repressor Zur low > 88
Escherichia coli ECRC102 0.45 NIAGMN_17025 yggR Uncharacterized protein YggR 0.45 NIAGMN_10800 zur zinc uptake transcriptional repressor Zur low > 80
Escherichia coli ECRC98 0.45 JDDGAC_22890 yggR Uncharacterized protein YggR 0.45 JDDGAC_16675 zur zinc uptake transcriptional repressor Zur low > 87
Escherichia coli ECRC99 0.45 KEDOAH_08880 yggR Uncharacterized protein YggR 0.45 KEDOAH_15110 zur zinc uptake transcriptional repressor Zur — —
Escherichia coli BW25113 0.45 b2950 yggR putative protein transport (VIMSS) 0.45 b4046 yjbK putative regulator (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_00766 putative protein YggR 0.45 OHPLBJKB_03997 Zinc uptake regulation protein low > 74
Klebsiella michiganensis M5al 0.44 BWI76_RS24095 twitching motility protein PilT 0.44 BWI76_RS01890 transcriptional regulator Zur low > 92
Rahnella sp. WP5 0.44 EX31_RS02680 type IV pilus twitching motility protein PilT 0.46 EX31_RS11860 zinc uptake transcriptional repressor Zur low > 89
Pantoea sp. MT58 0.44 IAI47_03600 type IV pilus twitching motility protein PilT 0.46 IAI47_17875 zinc uptake transcriptional repressor Zur low > 76
Pantoea agglomerans CFBP13505 P0401 0.44 PagCFBP13505_RS16095 type IV pilus twitching motility protein PilT 0.47 PagCFBP13505_RS21200 zinc uptake transcriptional repressor Zur low > 74
Erwinia amylovora T8 0.42 OLJFJH_08535 type IV pili twitching motility protein PilT 0.45 OLJFJH_03565 zinc uptake transcriptional repressor Zur low > 58
Erwinia tracheiphila SCR3 0.20 LU632_RS25695 traJ plasmid transfer ATPase TraJ 0.49 LU632_RS22295 zur zinc uptake transcriptional repressor Zur low > 74

Not shown: 25 genomes with orthologs for CSW01_02460 only; 16 genomes with orthologs for CSW01_01980 only