Conservation of cofitness between CSW01_01825 and CSW01_01735 in Vibrio cholerae E7946 ATCC 55056

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01825 DNA mismatch repair protein MutL 1.0 CSW01_01735 peptidase M23 0.50 17
Pantoea sp. MT58 0.46 IAI47_02580 DNA mismatch repair endonuclease MutL 0.26 IAI47_00720 murein hydrolase activator EnvC low > 76
Erwinia tracheiphila SCR3 0.46 LU632_RS02045 mutL DNA mismatch repair endonuclease MutL 0.26 LU632_RS21895 envC murein hydrolase activator EnvC low > 74
Erwinia amylovora T8 0.45 OLJFJH_02510 DNA mismatch repair endonuclease MutL 0.25 OLJFJH_05895 murein hydrolase activator EnvC low > 58
Serratia liquefaciens MT49 0.45 IAI46_01615 DNA mismatch repair endonuclease MutL 0.27 IAI46_24715 murein hydrolase activator EnvC low > 86
Dickeya dadantii 3937 0.45 DDA3937_RS18620 DNA mismatch repair endonuclease MutL 0.29 DDA3937_RS20420 murein hydrolase activator EnvC low > 74
Pectobacterium carotovorum WPP14 0.44 HER17_RS02575 DNA mismatch repair endonuclease MutL 0.29 HER17_RS20750 murein hydrolase activator EnvC low > 75
Dickeya dianthicola 67-19 0.44 HGI48_RS18555 DNA mismatch repair endonuclease MutL 0.29 HGI48_RS00780 murein hydrolase activator EnvC low > 71
Dickeya dianthicola ME23 0.44 DZA65_RS19690 DNA mismatch repair endonuclease MutL 0.29 DZA65_RS00835 murein hydrolase activator EnvC low > 75
Enterobacter sp. TBS_079 0.44 MPMX20_00451 DNA mismatch repair protein MutL 0.28 MPMX20_00120 Murein hydrolase activator EnvC low > 85
Rahnella sp. WP5 0.44 EX31_RS08830 DNA mismatch repair endonuclease MutL 0.27 EX31_RS14365 murein hydrolase activator EnvC low > 89
Enterobacter asburiae PDN3 0.44 EX28DRAFT_3367 DNA mismatch repair protein MutL 0.28 EX28DRAFT_3864 Membrane-bound metallopeptidase low > 76
Klebsiella michiganensis M5al 0.44 BWI76_RS02525 DNA mismatch repair protein MutL 0.27 BWI76_RS27235 murein hydrolase activator EnvC low > 92
Escherichia fergusonii Becca 0.44 EFB2_04365 DNA mismatch repair protein MutL 0.28 EFB2_00197 Murein hydrolase activator EnvC low > 86
Escherichia coli BW25113 0.44 b4170 mutL DNA mismatch repair protein (NCBI) 0.28 b3613 yibP putative membrane protein (VIMSS) low > 76
Escherichia coli BL21 0.44 ECD_04037 methyl-directed mismatch repair protein 0.27 ECD_03471 activator of AmiB,C murein hydrolases, septal ring factor — —
Escherichia coli Nissle 1917 0.43 ECOLIN_RS24220 DNA mismatch repair endonuclease MutL 0.28 ECOLIN_RS20620 murein hydrolase activator EnvC low > 55
Escherichia coli ECRC62 0.43 BNILDI_06960 mutL DNA mismatch repair endonuclease MutL 0.28 BNILDI_03905 envC murein hydrolase activator EnvC low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_03872 DNA mismatch repair protein MutL 0.28 OHPLBJKB_00086 Murein hydrolase activator EnvC low > 73
Escherichia coli ECOR27 0.43 NOLOHH_04530 mutL DNA mismatch repair endonuclease MutL 0.28 NOLOHH_07610 envC murein hydrolase activator EnvC low > 75
Escherichia coli ECRC102 0.43 NIAGMN_10115 mutL DNA mismatch repair endonuclease MutL 0.28 NIAGMN_13490 envC murein hydrolase activator EnvC — —
Escherichia coli ECOR38 0.43 HEPCGN_10495 mutL DNA mismatch repair endonuclease MutL 0.28 HEPCGN_14570 envC murein hydrolase activator EnvC low > 87
Escherichia coli ECRC98 0.43 JDDGAC_15905 mutL DNA mismatch repair endonuclease MutL 0.28 JDDGAC_19355 envC murein hydrolase activator EnvC low > 86
Escherichia coli ECRC100 0.43 OKFHMN_12265 mutL DNA mismatch repair endonuclease MutL 0.28 OKFHMN_15730 envC murein hydrolase activator EnvC low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF823 DNA mismatch repair protein MutL 0.28 GFF397 Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP — —
Escherichia coli ECRC101 0.43 MCAODC_02780 mutL DNA mismatch repair endonuclease MutL 0.28 MCAODC_06240 envC murein hydrolase activator EnvC low > 87
Escherichia coli ECRC99 0.43 KEDOAH_15890 mutL DNA mismatch repair endonuclease MutL 0.28 KEDOAH_12420 envC murein hydrolase activator EnvC — —
Shewanella loihica PV-4 0.37 Shew_0564 DNA mismatch repair protein MutL (RefSeq) 0.29 Shew_3807 peptidase M23B (RefSeq) low > 60
Shewanella sp. ANA-3 0.37 Shewana3_0595 mutL DNA mismatch repair protein (RefSeq) 0.28 Shewana3_0050 peptidase M23B (RefSeq) low > 73
Shewanella oneidensis MR-1 0.37 SO0601 mutL DNA mismatch repair protein MutL (NCBI ptt file) 0.26 SO0048 peptidase, M23/M37 family (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.36 Sama_3027 mutL DNA mismatch repair protein (RefSeq) 0.29 Sama_0059 M24/M37 family peptidase (RefSeq) low > 62
Marinobacter adhaerens HP15 0.35 HP15_2501 DNA mismatch repair protein mutL 0.22 HP15_3006 peptidase M23B low > 73
Pseudomonas sp. S08-1 0.35 OH686_09480 DNA mismatch repair protein MutL 0.21 OH686_14650 Murein hydrolase activator EnvC low > 80
Pseudomonas simiae WCS417 0.35 PS417_02480 DNA mismatch repair protein 0.23 PS417_01600 peptidase M23 low > 88
Pseudomonas fluorescens SBW25 0.35 PFLU_RS02560 DNA mismatch repair endonuclease MutL 0.23 PFLU_RS01650 murein hydrolase activator EnvC low > 109
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS02560 DNA mismatch repair endonuclease MutL 0.23 PFLU_RS01650 murein hydrolase activator EnvC low > 109
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_3616 DNA mismatch repair protein MutL 0.22 Pf6N2E2_3834 Lipoprotein NlpD low > 103
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_1414 DNA mismatch repair protein MutL 0.21 Pf1N1B4_1618 Lipoprotein NlpD — —
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_13135 DNA mismatch repair protein 0.22 AO353_12110 peptidase M23 low > 101
Pseudomonas sp. RS175 0.34 PFR28_05119 DNA mismatch repair protein MutL 0.22 PFR28_04937 Murein hydrolase activator EnvC low > 88
Pseudomonas sp. BP01 0.34 JOY50_RS17220 mutL DNA mismatch repair endonuclease MutL 0.20 JOY50_RS09415 murein hydrolase activator EnvC low > 84
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_156 DNA mismatch repair protein MutL 0.20 PfGW456L13_354 Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP low > 87
Pseudomonas putida KT2440 0.34 PP_4896 DNA mismatch repair protein MutL 0.20 PP_5057 Peptidase, M23/M37 family low > 96
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_08665 DNA mismatch repair protein 0.22 AO356_09775 peptidase M23 low > 104
Alteromonas macleodii MIT1002 0.32 MIT1002_03790 DNA mismatch repair protein MutL 0.27 MIT1002_00489 Septal ring factor low > 70
Pseudomonas aeruginosa PA14 0.32 IKLFDK_28810 DNA mismatch repair endonuclease MutL 0.20 IKLFDK_27840 peptidase M23 low > 101
Pseudomonas sp. DMC3 0.32 GFF3218 DNA mismatch repair protein MutL 0.21 GFF4090 Murein hydrolase activator EnvC low > 89
Rhodanobacter denitrificans MT42 0.30 LRK55_RS14865 DNA mismatch repair endonuclease MutL 0.14 LRK55_RS10660 peptidoglycan DD-metalloendopeptidase family protein — —
Rhodanobacter denitrificans FW104-10B01 0.30 LRK54_RS15150 DNA mismatch repair endonuclease MutL 0.14 LRK54_RS10955 peptidoglycan DD-metalloendopeptidase family protein low > 59
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS00855 DNA mismatch repair endonuclease MutL 0.15 ABZR86_RS13355 peptidoglycan DD-metalloendopeptidase family protein low > 74
Rhodanobacter sp. FW510-T8 0.29 OKGIIK_03920 mutL DNA mismatch repair endonuclease MutL 0.14 OKGIIK_12915 Peptidase M23 0.42 42
Lysobacter sp. OAE881 0.28 ABIE51_RS08065 DNA mismatch repair endonuclease MutL 0.20 ABIE51_RS19260 peptidoglycan DD-metalloendopeptidase family protein low > 62
Rhodanobacter sp000427505 FW510-R12 0.28 LRK53_RS13465 DNA mismatch repair endonuclease MutL 0.14 LRK53_RS03745 peptidoglycan DD-metalloendopeptidase family protein low > 60
Xanthomonas campestris pv. campestris strain 8004 0.28 Xcc-8004.2256.1 DNA mismatch repair protein MutL 0.17 Xcc-8004.29.1 Cell wall endopeptidase, family M23/M37 low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.20 ABZR88_RS00380 DNA mismatch repair endonuclease MutL 0.11 ABZR88_RS18275 murein hydrolase activator EnvC — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.20 CA264_13305 DNA mismatch repair protein MutL 0.08 CA264_14515 peptidase M23 — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.19 Echvi_0780 DNA mismatch repair protein MutL 0.09 Echvi_4076 Membrane-bound metallopeptidase — —
Fusobacterium nucleatum SB010 0.18 HUW76_07720 DNA mismatch repair endonuclease MutL 0.07 HUW76_08065 peptidoglycan DD-metalloendopeptidase family protein low > 35
Bacteroides ovatus ATCC 8483 0.18 BACOVA_00344 DNA mismatch repair domain protein 0.09 BACOVA_01841 peptidase, M23 family — —
Bacteroides stercoris CC31F 0.18 HMPREF1181_RS07405 DNA mismatch repair endonuclease MutL 0.09 HMPREF1181_RS02875 peptidoglycan DD-metalloendopeptidase family protein — —

Not shown: 36 genomes with orthologs for CSW01_01825 only; 4 genomes with orthologs for CSW01_01735 only