| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_17100 | | LysR family transcriptional regulator | 1.0 | CSW01_01485 | | transcriptional regulator | 0.62 | 12 |
| Klebsiella michiganensis M5al | 0.49 | BWI76_RS24790 | | LysR family transcriptional regulator | 0.51 | BWI76_RS26245 | | transcriptional regulator | low | > 92 |
| Klebsiella pneumoniae MKP103 | 0.49 | KDGMDA_05655 | | DNA-binding transcriptional regulator YhaJ | 0.51 | KDGMDA_07120 | | gluconate operon transcriptional repressor GntR | low | > 95 |
| Enterobacter sp. TBS_079 | 0.49 | MPMX20_04013 | | HTH-type transcriptional regulator YhaJ | 0.52 | MPMX20_04319 | | HTH-type transcriptional regulator GntR | low | > 85 |
| Erwinia amylovora T8 | 0.49 | OLJFJH_02260 | | LysR family transcriptional regulator | 0.56 | OLJFJH_04280 | | gluconate operon transcriptional repressor GntR | low | > 58 |
| Escherichia coli BW25113 | 0.49 | b3105 | yhaJ | predicted DNA-binding transcriptional regulator (NCBI) | 0.52 | b3438 | gntR | DNA-binding transcriptional repressor (NCBI) | low | > 76 |
| Escherichia coli ECRC101 | 0.49 | MCAODC_08965 | yhaJ | DNA-binding transcriptional regulator YhaJ | 0.52 | MCAODC_07365 | gntR | gluconate operon transcriptional repressor GntR | low | > 87 |
| Escherichia coli ECOR27 | 0.49 | NOLOHH_10230 | yhaJ | DNA-binding transcriptional regulator YhaJ | 0.51 | NOLOHH_08635 | gntR | gluconate operon transcriptional repressor GntR | low | > 76 |
| Escherichia coli ECRC98 | 0.49 | JDDGAC_22085 | yhaJ | DNA-binding transcriptional regulator YhaJ | 0.52 | JDDGAC_20465 | gntR | gluconate operon transcriptional repressor GntR | low | > 87 |
| Escherichia coli ECRC102 | 0.49 | NIAGMN_16215 | yhaJ | DNA-binding transcriptional regulator YhaJ | 0.52 | NIAGMN_14605 | gntR | gluconate operon transcriptional repressor GntR | low | > 80 |
| Escherichia coli Nissle 1917 | 0.49 | ECOLIN_RS17890 | | DNA-binding transcriptional regulator YhaJ | 0.52 | ECOLIN_RS19675 | | gluconate operon transcriptional repressor GntR | low | > 55 |
| Escherichia coli ECRC62 | 0.49 | BNILDI_01295 | yhaJ | DNA-binding transcriptional regulator YhaJ | 0.52 | BNILDI_02870 | gntR | gluconate operon transcriptional repressor GntR | low | > 75 |
| Escherichia coli BL21 | 0.49 | ECD_02974 | | LysR family putative transcriptional regulator | 0.51 | ECD_03289 | | d-gluconate inducible gluconate regulon transcriptional repressor | low | > 61 |
| Escherichia fergusonii Becca | 0.49 | EFB2_00708 | | HTH-type transcriptional regulator YhaJ | 0.52 | EFB2_00382 | | HTH-type transcriptional regulator GntR | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.49 | OHPLBJKB_00593 | | HTH-type transcriptional regulator YhaJ | 0.52 | OHPLBJKB_00264 | | HTH-type transcriptional regulator GntR | low | > 74 |
| Escherichia coli ECRC100 | 0.49 | OKFHMN_18450 | yhaJ | DNA-binding transcriptional regulator YhaJ | 0.52 | OKFHMN_16835 | gntR | gluconate operon transcriptional repressor GntR | low | > 79 |
| Enterobacter asburiae PDN3 | 0.49 | EX28DRAFT_3172 | | Transcriptional regulator | 0.51 | EX28DRAFT_4274 | | transcriptional regulator, LacI family | low | > 76 |
| Escherichia coli ECRC99 | 0.49 | KEDOAH_09695 | yhaJ | DNA-binding transcriptional regulator YhaJ | 0.52 | KEDOAH_11305 | gntR | gluconate operon transcriptional repressor GntR | — | — |
| Escherichia coli ECOR38 | 0.49 | HEPCGN_17285 | yhaJ | DNA-binding transcriptional regulator YhaJ | 0.52 | HEPCGN_15660 | gntR | gluconate operon transcriptional repressor GntR | low | > 88 |
| Rahnella sp. WP5 | 0.48 | EX31_RS12620 | | LysR family transcriptional regulator | 0.54 | EX31_RS05060 | | gluconate operon transcriptional repressor GntR | low | > 89 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.48 | GFF3201 | | LysR-family transcriptional regulator YhaJ | 0.49 | GFF570 | | Gluconate utilization system Gnt-I transcriptional repressor | low | > 78 |
| Dickeya dianthicola 67-19 | 0.48 | HGI48_RS02750 | | LysR family transcriptional regulator | 0.55 | HGI48_RS19900 | | gluconate operon transcriptional repressor GntR | low | > 71 |
| Pantoea sp. MT58 | 0.48 | IAI47_02820 | | LysR family transcriptional regulator | 0.52 | IAI47_01650 | | gluconate operon transcriptional repressor GntR | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.48 | HER17_RS18770 | | LysR family transcriptional regulator | 0.52 | HER17_RS01450 | | gluconate operon transcriptional repressor GntR | low | > 75 |
| Erwinia tracheiphila SCR3 | 0.48 | LU632_RS02265 | | LysR family transcriptional regulator | 0.53 | LU632_RS19160 | gntR | gluconate operon transcriptional repressor GntR | low | > 73 |
| Pantoea agglomerans CFBP13505 P0401 | 0.48 | PagCFBP13505_RS11420 | | LysR family transcriptional regulator | 0.50 | PagCFBP13505_RS18155 | | gluconate operon transcriptional repressor GntR | low | > 74 |
| Dickeya dadantii 3937 | 0.48 | DDA3937_RS02775 | | LysR family transcriptional regulator | 0.55 | DDA3937_RS19785 | | gluconate operon transcriptional repressor GntR | low | > 74 |
| Dickeya dianthicola ME23 | 0.48 | DZA65_RS02905 | | LysR family transcriptional regulator | 0.55 | DZA65_RS20970 | | gluconate operon transcriptional repressor GntR | low | > 75 |
| Erwinia tracheiphila HP pepo 2.2 | 0.48 | IJEDHG_06645 | | LysR family transcriptional regulator | 0.54 | IJEDHG_08040 | gntR | gluconate operon transcriptional repressor GntR | low | > 61 |
| Serratia liquefaciens MT49 | 0.46 | IAI46_22280 | | LysR family transcriptional regulator | 0.54 | IAI46_23965 | | gluconate operon transcriptional repressor GntR | low | > 87 |
| Ralstonia sp. UNC404CL21Col | 0.36 | ABZR87_RS15530 | | LysR substrate-binding domain-containing protein | 0.26 | ABZR87_RS18255 | | LacI family DNA-binding transcriptional regulator | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.36 | RPSI07_RS13590 | | LysR family transcriptional regulator | 0.26 | RPSI07_RS07575 | | LacI family DNA-binding transcriptional regulator | low | > 81 |
| Ralstonia solanacearum IBSBF1503 | 0.35 | RALBFv3_RS03640 | | LysR family transcriptional regulator | 0.24 | RALBFv3_RS16125 | | GntR family transcriptional regulator | low | > 76 |
| Ralstonia solanacearum UW163 | 0.35 | UW163_RS10030 | | LysR family transcriptional regulator | 0.24 | UW163_RS16860 | | GntR family transcriptional regulator | — | — |
| Ralstonia solanacearum GMI1000 | 0.35 | RS_RS11085 | | LysR family transcriptional regulator | 0.26 | RS_RS24865 | | LacI family DNA-binding transcriptional regulator | low | > 80 |
| Paraburkholderia sabiae LMG 24235 | 0.33 | QEN71_RS37445 | | LysR family transcriptional regulator | 0.29 | QEN71_RS13585 | | LacI family DNA-binding transcriptional regulator | low | > 153 |
| Cupriavidus basilensis FW507-4G11 | 0.33 | RR42_RS14800 | | LysR family transcriptional regulator | 0.26 | RR42_RS22645 | | GntR family transcriptional regulator | low | > 128 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.32 | H281DRAFT_01092 | | transcriptional regulator, LysR family | 0.30 | H281DRAFT_05920 | | transcriptional regulator, LacI family | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.31 | BPHYT_RS30350 | | LysR family transcriptional regulator | 0.32 | BPHYT_RS00410 | | LacI family transcription regulator | low | > 109 |
| Herbaspirillum seropedicae SmR1 | 0.31 | HSERO_RS17845 | | LysR family transcriptional regulator | 0.34 | HSERO_RS05460 | | LacI family transcription regulator | low | > 78 |
| Variovorax sp. SCN45 | 0.28 | GFF4501 | | Transcriptional regulator, LysR family | 0.30 | GFF7257 | | KEGG: LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor | low | > 127 |
| Variovorax sp. OAS795 | 0.27 | ABID97_RS18015 | | LysR family transcriptional regulator | 0.29 | ABID97_RS01205 | | LacI family DNA-binding transcriptional regulator | low | > 91 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.26 | GFF5181 | | LysR-family transcriptional regulator | 0.30 | GFF5509 | | Gluconate utilization system Gnt-I transcriptional repressor | low | > 90 |
| Acidovorax sp. GW101-3H11 | 0.21 | Ac3H11_4160 | | LysR-family transcriptional regulator | 0.29 | Ac3H11_3230 | | Gluconate utilization system Gnt-I transcriptional repressor | low | > 79 |
| Pseudomonas fluorescens FW300-N1B4 | 0.20 | Pf1N1B4_548 | | Transcriptional regulator, LysR family | 0.35 | Pf1N1B4_558 | | Gluconate utilization system Gnt-I transcriptional repressor | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.20 | AO353_18280 | | LysR family transcriptional regulator | 0.33 | AO353_03255 | | LacI family transcriptional regulator | low | > 101 |
| Pseudomonas fluorescens FW300-N2C3 | 0.19 | AO356_04235 | | LysR family transcriptional regulator | 0.34 | AO356_05065 | | LacI family transcriptional regulator | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.19 | Pf6N2E2_2682 | | Transcriptional regulator, LysR family | 0.34 | Pf6N2E2_2865 | | Gluconate utilization system Gnt-I transcriptional repressor | low | > 103 |
| Pseudomonas fluorescens GW456-L13 | 0.19 | PfGW456L13_4458 | | Transcriptional regulator, LysR family | 0.34 | PfGW456L13_1925 | | Gluconate utilization system Gnt-I transcriptional repressor | 0.25 | 62 |
| Pseudomonas sp. RS175 | 0.19 | PFR28_00748 | | HTH-type transcriptional regulator YhaJ | 0.34 | PFR28_00593 | | HTH-type transcriptional regulator GntR | low | > 88 |
| Pseudomonas sp. DMC3 | 0.19 | GFF2350 | | HTH-type transcriptional regulator YhaJ | 0.33 | GFF5268 | | HTH-type transcriptional regulator GntR | low | > 89 |
| Pseudomonas putida KT2440 | 0.19 | PP_4539 | | Transcriptional regulator, LysR family | 0.31 | PP_3415 | | Transcriptional regulator, LacI family | low | > 96 |
| Pseudomonas sp. BP01 | 0.19 | JOY50_RS01260 | | LysR family transcriptional regulator | 0.31 | JOY50_RS23605 | | LacI family DNA-binding transcriptional regulator | low | > 84 |
| Pseudomonas aeruginosa MRSN321 | 0.19 | DY961_RS00790 | | LysR family transcriptional regulator | 0.36 | DY961_RS17990 | gntR;inference=COORDINATES | LacI family DNA-binding transcriptional regulator GntR | low | > 100 |
| Pseudomonas aeruginosa PUPa3 | 0.19 | DQ20_RS40250 | | LysR family transcriptional regulator | 0.36 | DQ20_RS59230 | gntR;inference=COORDINATES | LacI family DNA-binding transcriptional regulator GntR | low | > 101 |
| Pseudomonas aeruginosa PA14 | 0.19 | IKLFDK_16420 | | LysR family transcriptional regulator | 0.36 | IKLFDK_11375 | | LacI family DNA-binding transcriptional regulator GntR | low | > 98 |
| Pseudomonas syringae pv. syringae B728a | 0.18 | Psyr_3825 | | transcriptional regulator, LysR family | 0.32 | Psyr_3336 | | transcriptional regulator, LacI family | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.18 | Psyr_3825 | | transcriptional regulator, LysR family | 0.32 | Psyr_3336 | | transcriptional regulator, LacI family | low | > 86 |
| Pseudomonas sp. SVBP6 | 0.18 | COO64_RS21955 | | LysR family transcriptional regulator | 0.34 | COO64_RS25590 | | LacI family DNA-binding transcriptional regulator | low | > 93 |
| Pseudomonas segetis P6 | 0.17 | MPMX49_03254 | | HTH-type transcriptional regulator YhaJ | 0.33 | MPMX49_02373 | | HTH-type transcriptional regulator GntR | low | > 75 |
| Pseudomonas stutzeri RCH2 | 0.17 | Psest_1624 | | Transcriptional regulator | 0.34 | Psest_2126 | | Transcriptional regulators | low | > 67 |
| Alteromonas macleodii MIT1002 | 0.16 | MIT1002_02374 | | HTH-type transcriptional activator AllS | 0.31 | MIT1002_03475 | | Gluconate utilization system GNT-I transcriptional repressor | 0.38 | 69 |
| Rhizobium sp. OAE497 | 0.15 | ABIE40_RS08235 | | LysR family transcriptional regulator | 0.25 | ABIE40_RS04445 | | LacI family DNA-binding transcriptional regulator | low | > 107 |
Not shown: 11 genomes with orthologs for CSW01_17100 only; 13 genomes with orthologs for CSW01_01485 only