Conservation of cofitness between CSW01_03210 and CSW01_01485 in Vibrio cholerae E7946 ATCC 55056

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03210 iron ABC transporter permease 1.0 CSW01_01485 transcriptional regulator 0.97 3
Azospirillum brasilense Sp245 0.39 AZOBR_RS03155 iron ABC transporter permease 0.31 AZOBR_RS15720 LacI family transcription regulator
Agrobacterium fabrum C58 0.38 Atu0613 ABC transporter, membrane spanning protein 0.28 Atu4685 LacI family transcriptional regulator low > 89
Sinorhizobium meliloti 1021 0.36 SMc00775 iron(III) permease 0.29 SM_b20667 LacI family transcriptional regulator low > 103
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS04345 iron ABC transporter permease 0.26 RR42_RS22645 GntR family transcriptional regulator low > 128
Dinoroseobacter shibae DFL-12 0.36 Dshi_2023 binding-protein-dependent transport systems inner membrane component (RefSeq) 0.27 Dshi_3322 transcriptional regulator, LacI family (RefSeq)
Phaeobacter inhibens DSM 17395 0.35 PGA1_c32540 putative Fe(3+)-transport system protein SfuB 0.28 PGA1_c33870 putative HTH-type transcriptional regulator GntR low > 62
Pectobacterium carotovorum WPP14 0.33 HER17_RS05515 iron ABC transporter permease 0.52 HER17_RS01450 gluconate operon transcriptional repressor GntR low > 75
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_2233 Ferric iron ABC transporter, permease protein 0.35 Pf1N1B4_558 Gluconate utilization system Gnt-I transcriptional repressor low > 87
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_4484 Ferric iron ABC transporter, permease protein 0.34 Pf6N2E2_2865 Gluconate utilization system Gnt-I transcriptional repressor low > 103
Pseudomonas lactucae CFBP13502 0.32 GEMAOFIL_05590 hypothetical protein 0.34 GEMAOFIL_04536 HTH-type transcriptional regulator GntR low > 93
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_08740 iron ABC transporter permease 0.33 AO353_03255 LacI family transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_13030 iron ABC transporter permease 0.34 AO356_05065 LacI family transcriptional regulator low > 104
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS28920 iron ABC transporter permease 0.34 PFLU_RS23595 LacI family DNA-binding transcriptional regulator low > 109
Pseudomonas fluorescens SBW25 0.32 PFLU_RS28920 iron ABC transporter permease 0.34 PFLU_RS23595 LacI family DNA-binding transcriptional regulator low > 109
Pseudomonas simiae WCS417 0.31 PS417_27260 iron ABC transporter permease 0.33 PS417_21990 LacI family transcriptional regulator low > 88
Pseudomonas sp. RS175 0.31 PFR28_04317 hypothetical protein 0.34 PFR28_00593 HTH-type transcriptional regulator GntR low > 88
Xanthobacter sp. DMC5 0.31 GFF360 hypothetical protein 0.31 GFF1533 HTH-type transcriptional regulator GntR
Pseudomonas sp. BP01 0.30 JOY50_RS22420 ABC transporter permease 0.31 JOY50_RS23605 LacI family DNA-binding transcriptional regulator low > 84
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_0245 Binding-protein-dependent transport systems inner membrane component 0.32 Psyr_3336 transcriptional regulator, LacI family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_0245 Binding-protein-dependent transport systems inner membrane component 0.32 Psyr_3336 transcriptional regulator, LacI family low > 86
Pseudomonas sp. DMC3 0.30 GFF311 hypothetical protein 0.33 GFF5268 HTH-type transcriptional regulator GntR low > 89
Castellaniella sp019104865 MT123 0.30 ABCV34_RS03550 iron ABC transporter permease 0.26 ABCV34_RS12285 LacI family DNA-binding transcriptional regulator
Rhizobium sp. OAE497 0.30 ABIE40_RS21705 iron ABC transporter permease 0.25 ABIE40_RS04445 LacI family DNA-binding transcriptional regulator low > 107
Acidovorax sp. GW101-3H11 0.30 Ac3H11_3971 Ferric iron ABC transporter, permease protein 0.29 Ac3H11_3230 Gluconate utilization system Gnt-I transcriptional repressor low > 79
Pseudomonas sp. SVBP6 0.30 COO64_RS00965 iron ABC transporter permease 0.34 COO64_RS25590 LacI family DNA-binding transcriptional regulator low > 93
Pseudomonas putida KT2440 0.29 PP_5195 putative Iron ABC transporter, permease protein 0.31 PP_3415 Transcriptional regulator, LacI family low > 96
Azospirillum sp. SherDot2 0.29 MPMX19_01379 hypothetical protein 0.29 MPMX19_05332 HTH-type transcriptional regulator GntR low > 112
Variovorax sp. OAS795 0.29 ABID97_RS21260 iron ABC transporter permease 0.29 ABID97_RS01205 LacI family DNA-binding transcriptional regulator low > 91
Pseudomonas fluorescens GW456-L13 0.29 PfGW456L13_901 Ferric iron ABC transporter, permease protein 0.34 PfGW456L13_1925 Gluconate utilization system Gnt-I transcriptional repressor low > 87
Rahnella sp. WP5 0.28 EX31_RS17575 iron ABC transporter permease 0.54 EX31_RS05060 gluconate operon transcriptional repressor GntR low > 89
Variovorax sp. SCN45 0.28 GFF6761 Ferric iron ABC transporter, permease protein 0.30 GFF7257 KEGG: LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor low > 127
Pseudomonas aeruginosa PA14 0.28 IKLFDK_27390 iron ABC transporter permease 0.36 IKLFDK_11375 LacI family DNA-binding transcriptional regulator GntR low > 100
Hydrogenophaga sp. GW460-11-11-14-LB1 0.27 GFF663 Ferric iron ABC transporter, permease protein 0.30 GFF5509 Gluconate utilization system Gnt-I transcriptional repressor low > 90
Pseudomonas stutzeri RCH2 0.27 Psest_0180 ABC-type Fe3+ transport system, permease component 0.34 Psest_2126 Transcriptional regulators
Dickeya dadantii 3937 0.26 DDA3937_RS16000 iron ABC transporter permease 0.55 DDA3937_RS19785 gluconate operon transcriptional repressor GntR low > 74
Dickeya dianthicola ME23 0.26 DZA65_RS17205 iron ABC transporter permease 0.55 DZA65_RS20970 gluconate operon transcriptional repressor GntR low > 75
Dickeya dianthicola 67-19 0.26 HGI48_RS16120 iron ABC transporter permease 0.55 HGI48_RS19900 gluconate operon transcriptional repressor GntR low > 71
Herbaspirillum seropedicae SmR1 0.24 HSERO_RS16585 iron ABC transporter permease 0.34 HSERO_RS05460 LacI family transcription regulator low > 78
Alteromonas macleodii MIT1002 0.12 MIT1002_00116 Spermidine/putrescine transport system permease protein PotB 0.31 MIT1002_03475 Gluconate utilization system GNT-I transcriptional repressor low > 70
Burkholderia phytofirmans PsJN 0.12 BPHYT_RS23965 iron ABC transporter permease 0.32 BPHYT_RS00410 LacI family transcription regulator low > 109
Enterobacter sp. TBS_079 0.08 MPMX20_01120 hypothetical protein 0.52 MPMX20_04319 HTH-type transcriptional regulator GntR low > 85
Enterobacter asburiae PDN3 0.08 EX28DRAFT_2436 ABC-type Fe3+ transport system, permease component 0.51 EX28DRAFT_4274 transcriptional regulator, LacI family low > 76
Erwinia tracheiphila SCR3 0.07 LU632_RS03340 iron ABC transporter permease 0.53 LU632_RS19160 gntR gluconate operon transcriptional repressor GntR low > 74
Klebsiella michiganensis M5al 0.07 BWI76_RS10475 binding-protein-dependent transport system inner membrane protein 0.51 BWI76_RS26245 transcriptional regulator low > 92
Erwinia tracheiphila HP pepo 2.2 0.07 IJEDHG_05515 Iron ABC transporter permease 0.54 IJEDHG_08040 gntR gluconate operon transcriptional repressor GntR low > 61

Not shown: 13 genomes with orthologs for CSW01_03210 only; 26 genomes with orthologs for CSW01_01485 only