Conservation of cofitness between CSW01_02845 and CSW01_01380 in Vibrio cholerae E7946 ATCC 55056

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02845 cysteine synthase CysM 1.0 CSW01_01380 D-2-hydroxyacid dehydrogenase 0.61 5
Shewanella sp. ANA-3 0.82 Shewana3_3188 cysM cysteine synthase B (RefSeq) 0.40 Shewana3_0583 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) low > 73
Shewanella oneidensis MR-1 0.79 SO3598 cysM cysteine synthase B (NCBI ptt file) 0.38 SO0585 D-isomer specific 2-hydroxyacid dehydrogenase family protein (NCBI ptt file) low > 76
Pseudomonas stutzeri RCH2 0.76 Psest_1638 cysteine synthase B 0.20 Psest_2788 Phosphoglycerate dehydrogenase and related dehydrogenases — —
Pseudomonas sp. BP01 0.75 JOY50_RS23900 cysM cysteine synthase CysM 0.26 JOY50_RS01545 D-2-hydroxyacid dehydrogenase low > 84
Pseudomonas segetis P6 0.75 MPMX49_01652 Cysteine synthase B 0.24 MPMX49_01840 Glyoxylate/hydroxypyruvate reductase A — —
Pseudomonas aeruginosa PUPa3 0.75 DQ20_RS45010 cysM;go_function=cysteine cysteine synthase B 0.24 DQ20_RS52955 D-2-hydroxyacid dehydrogenase low > 101
Pseudomonas aeruginosa PA14 0.75 IKLFDK_04190 cysteine synthase B 0.24 IKLFDK_06150 D-2-hydroxyacid dehydrogenase low > 98
Pseudomonas aeruginosa MRSN321 0.75 DY961_RS07785 cysM;go_function=cysteine cysteine synthase B 0.24 DY961_RS18815 D-2-hydroxyacid dehydrogenase low > 100
Pseudomonas sp. SVBP6 0.75 COO64_RS07335 cysM cysteine synthase CysM 0.26 COO64_RS26160 D-2-hydroxyacid dehydrogenase low > 93
Pseudomonas sp. S08-1 0.74 OH686_18950 cysteine synthase B 0.24 OH686_05305 D-3-phosphoglycerate dehydrogenase — —
Pseudomonas putida KT2440 0.74 PP_1654 cysteine synthase B 0.25 PP_4589 D-isomer specific 2-hydroxyacid dehydrogenase family protein low > 96
Acinetobacter radioresistens SK82 0.74 MPMX26_00536 Cysteine synthase B 0.20 MPMX26_01500 Glyoxylate/hydroxypyruvate reductase A — —
Pseudomonas fluorescens FW300-N2E2 0.74 Pf6N2E2_5721 Cysteine synthase B (EC 2.5.1.47) 0.25 Pf6N2E2_2725 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) — —
Pseudomonas sp. RS175 0.74 PFR28_03225 Cysteine synthase B 0.25 PFR28_00714 Glyoxylate/hydroxypyruvate reductase A — —
Pseudomonas fluorescens GW456-L13 0.74 PfGW456L13_2032 Cysteine synthase B (EC 2.5.1.47) 0.26 PfGW456L13_4494 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 87
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_02720 cysteine synthase 0.26 AO353_17865 hydroxyacid dehydrogenase low > 101
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_19050 cysteine synthase 0.24 AO356_04410 hydroxyacid dehydrogenase low > 104
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_3506 Cysteine synthase B (EC 2.5.1.47) 0.25 Pf1N1B4_3347 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 87
Pseudomonas lactucae CFBP13502 0.73 GEMAOFIL_04225 Cysteine synthase B 0.25 GEMAOFIL_01611 Glyoxylate/hydroxypyruvate reductase A — —
Pseudomonas sp. DMC3 0.73 GFF4820 Cysteine synthase B 0.25 GFF2313 Glyoxylate/hydroxypyruvate reductase A low > 89
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS22105 cysteine synthase CysM 0.26 PFLU_RS07475 D-2-hydroxyacid dehydrogenase low > 109
Pseudomonas fluorescens SBW25 0.73 PFLU_RS22105 cysteine synthase CysM 0.26 PFLU_RS07475 D-2-hydroxyacid dehydrogenase low > 109
Pseudomonas simiae WCS417 0.72 PS417_20160 cysteine synthase 0.26 PS417_07385 2-hydroxyacid dehydrogenase low > 88
Pseudomonas orientalis W4I3 0.72 QF045_RS22270 cysteine synthase CysM 0.25 QF045_RS10040 D-2-hydroxyacid dehydrogenase — —
Klebsiella pneumoniae MKP103 0.72 KDGMDA_27525 cysteine synthase B 0.19 KDGMDA_18520 glyoxylate/hydroxypyruvate reductase GhrA low > 95
Pseudomonas syringae pv. syringae B728a 0.72 Psyr_3697 cysteine synthase 0.25 Psyr_1565 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.72 Psyr_3697 cysteine synthase 0.25 Psyr_1565 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein — —
Enterobacter sp. TBS_079 0.71 MPMX20_03313 Cysteine synthase B 0.19 MPMX20_01715 Glyoxylate/hydroxypyruvate reductase A — —
Klebsiella michiganensis M5al 0.71 BWI76_RS20685 cysteine synthase B 0.20 BWI76_RS21910 glyoxylate/hydroxypyruvate reductase A — —
Serratia liquefaciens MT49 0.69 IAI46_18490 cysteine synthase CysM 0.20 IAI46_09955 glyoxylate/hydroxypyruvate reductase GhrA low > 87
Pectobacterium carotovorum WPP14 0.68 HER17_RS17210 cysteine synthase CysM 0.27 HER17_RS02495 D-2-hydroxyacid dehydrogenase low > 75
Variovorax sp. SCN45 0.67 GFF6025 Cysteine synthase B (EC 2.5.1.47) 0.18 GFF2017 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) — —
Pantoea agglomerans CFBP13505 P0401 0.66 PagCFBP13505_RS19950 cysteine synthase CysM 0.17 PagCFBP13505_RS01525 glyoxylate/hydroxypyruvate reductase A low > 74
Ralstonia solanacearum IBSBF1503 0.66 RALBFv3_RS13825 cysteine synthase CysM 0.19 RALBFv3_RS18895 glyoxylate/hydroxypyruvate reductase A — —
Ralstonia solanacearum UW163 0.66 UW163_RS15985 cysteine synthase CysM 0.19 UW163_RS20235 glyoxylate/hydroxypyruvate reductase A — —
Variovorax sp. OAS795 0.66 ABID97_RS07880 cysteine synthase CysM 0.20 ABID97_RS25925 glyoxylate/hydroxypyruvate reductase A — —
Dickeya dianthicola ME23 0.66 DZA65_RS04315 cysteine synthase CysM 0.24 DZA65_RS19760 D-2-hydroxyacid dehydrogenase low > 75
Dickeya dadantii 3937 0.66 DDA3937_RS04425 cysteine synthase CysM 0.25 DDA3937_RS18695 D-2-hydroxyacid dehydrogenase low > 74
Ralstonia solanacearum PSI07 0.66 RPSI07_RS19645 cysteine synthase CysM 0.19 RPSI07_RS04655 glyoxylate/hydroxypyruvate reductase A — —
Paraburkholderia bryophila 376MFSha3.1 0.65 H281DRAFT_03911 cysteine synthase 0.20 H281DRAFT_06341 glyoxylate/hydroxypyruvate reductase A — —
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS04135 cysteine synthase CysM 0.23 QEN71_RS32025 glyoxylate/hydroxypyruvate reductase A — —
Dickeya dianthicola 67-19 0.65 HGI48_RS04400 cysteine synthase CysM 0.25 HGI48_RS18625 D-2-hydroxyacid dehydrogenase low > 71
Ralstonia sp. UNC404CL21Col 0.65 ABZR87_RS09515 cysteine synthase CysM 0.18 ABZR87_RS21550 glyoxylate/hydroxypyruvate reductase A low > 80
Herbaspirillum seropedicae SmR1 0.64 HSERO_RS04915 cysteine synthase 0.19 HSERO_RS05655 D-2-hydroxyacid dehydrogenase — —
Paraburkholderia graminis OAS925 0.63 ABIE53_003144 cysteine synthase B 0.21 ABIE53_005027 glyoxylate/hydroxypyruvate reductase A low > 113
Castellaniella sp019104865 MT123 0.62 ABCV34_RS07055 cysteine synthase CysM 0.18 ABCV34_RS06730 glyoxylate/hydroxypyruvate reductase A — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.57 CA264_08940 cysteine synthase B 0.24 CA264_03335 glyoxylate/hydroxypyruvate reductase A low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.55 Echvi_0220 cysteine synthase B 0.21 Echvi_3471 Phosphoglycerate dehydrogenase and related dehydrogenases — —
Lysobacter sp. OAE881 0.35 ABIE51_RS15860 cysteine synthase A 0.20 ABIE51_RS10035 glyoxylate/hydroxypyruvate reductase A low > 62
Dinoroseobacter shibae DFL-12 0.28 Dshi_2314 Pyridoxal-5'-phosphate-dependent protein beta subunit (RefSeq) 0.16 Dshi_0590 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.27 PGA1_c13950 cysteine synthase CysK 0.17 PGA1_c26570 putative glyoxylate/hydroxypyruvate reductase A — —

Not shown: 40 genomes with orthologs for CSW01_02845 only; 9 genomes with orthologs for CSW01_01380 only