Conservation of cofitness between CSW01_03330 and CSW01_01025 in Vibrio cholerae E7946 ATCC 55056

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03330 transcription elongation factor GreA 1.0 CSW01_01025 LysE family translocator 0.54 6
Shewanella sp. ANA-3 0.71 Shewana3_1017 transcription elongation factor GreA (RefSeq) 0.35 Shewana3_3536 lysine exporter protein LysE/YggA (RefSeq) low > 73
Shewanella oneidensis MR-1 0.71 SO1191 greA transcription elongation factor GreA (NCBI ptt file) 0.37 SO0765 threonine efflux protein, putative (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.71 Shew_2837 transcription elongation factor GreA (RefSeq) 0.34 Shew_1462 lysine exporter protein LysE/YggA (RefSeq) low > 60
Shewanella amazonensis SB2B 0.69 Sama_0951 GreA/GreB family elongation factor (RefSeq) 0.28 Sama_1550 threonine efflux protein, putative (RefSeq) low > 62
Escherichia coli ECRC98 0.68 JDDGAC_21670 greA transcription elongation factor GreA 0.27 JDDGAC_17980 rhtC threonine export protein RhtC low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_00519 Transcription elongation factor GreA 0.27 OHPLBJKB_04228 Threonine efflux protein low > 73
Escherichia coli ECOR27 0.68 NOLOHH_09845 greA transcription elongation factor GreA 0.27 NOLOHH_06485 rhtC threonine export protein RhtC low > 75
Escherichia coli ECRC102 0.68 NIAGMN_15805 greA transcription elongation factor GreA 0.27 NIAGMN_12110 rhtC threonine export protein RhtC
Escherichia coli BL21 0.68 ECD_03046 transcript cleavage factor 0.27 ECD_03702 threonine efflux pump low > 61
Escherichia coli ECRC99 0.68 KEDOAH_10105 greA transcription elongation factor GreA 0.27 KEDOAH_13795 rhtC threonine export protein RhtC
Escherichia fergusonii Becca 0.68 EFB2_00642 Transcription elongation factor GreA 0.27 EFB2_04814 Threonine efflux protein low > 86
Escherichia coli ECRC101 0.68 MCAODC_08565 greA transcription elongation factor GreA 0.27 MCAODC_04860 rhtC threonine export protein RhtC low > 87
Escherichia coli BW25113 0.68 b3181 greA transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) 0.27 b3823 rhtC threonine efflux system (NCBI) low > 76
Escherichia coli ECOR38 0.68 HEPCGN_16920 greA transcription elongation factor GreA 0.27 HEPCGN_13055 rhtC threonine export protein RhtC low > 87
Escherichia coli ECRC62 0.68 BNILDI_01690 greA transcription elongation factor GreA 0.27 BNILDI_05045 rhtC threonine export protein RhtC low > 75
Escherichia coli Nissle 1917 0.68 ECOLIN_RS18320 transcription elongation factor GreA 0.27 ECOLIN_RS21940 threonine export protein RhtC
Escherichia coli ECRC100 0.68 OKFHMN_18045 greA transcription elongation factor GreA 0.27 OKFHMN_14355 rhtC threonine export protein RhtC low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.67 GFF2922 Transcription elongation factor GreA 0.26 GFF249 L-lysine permease low > 78
Alteromonas macleodii MIT1002 0.67 MIT1002_01468 Transcript cleavage factor GreA 0.22 MIT1002_02144 Threonine efflux protein low > 70
Enterobacter sp. TBS_079 0.66 MPMX20_04085 Transcription elongation factor GreA 0.23 MPMX20_04457 Threonine efflux protein low > 85
Enterobacter asburiae PDN3 0.66 EX28DRAFT_3232 transcription elongation factor GreA 0.26 EX28DRAFT_4488 The Resistance to Homoserine/Threonine (RhtB) Family protein low > 76
Klebsiella michiganensis M5al 0.66 BWI76_RS25160 transcription elongation factor GreA 0.26 BWI76_RS01250 threonine export protein RhtC low > 92
Dickeya dadantii 3937 0.66 DDA3937_RS03015 transcription elongation factor GreA 0.25 DDA3937_RS18300 LysE family translocator
Pectobacterium carotovorum WPP14 0.65 HER17_RS18330 transcription elongation factor GreA 0.25 HER17_RS02915 LysE family translocator
Dickeya dianthicola 67-19 0.65 HGI48_RS03185 transcription elongation factor GreA 0.24 HGI48_RS20000 threonine export protein RhtC low > 71
Pseudomonas aeruginosa PA14 0.65 IKLFDK_29820 transcription elongation factor GreA 0.40 IKLFDK_07765 lysine transporter LysE low > 101
Dickeya dianthicola ME23 0.65 DZA65_RS03180 transcription elongation factor GreA 0.25 DZA65_RS21040 threonine export protein RhtC low > 75
Rahnella sp. WP5 0.64 EX31_RS08595 transcription elongation factor GreA 0.26 EX31_RS03810 LysE family translocator low > 89
Pantoea sp. MT58 0.64 IAI47_17080 transcription elongation factor GreA 0.25 IAI47_18355 threonine export protein RhtC low > 76
Erwinia amylovora T8 0.63 OLJFJH_07185 transcription elongation factor GreA 0.27 OLJFJH_01390 lysine transporter LysE low > 58
Serratia liquefaciens MT49 0.63 IAI46_01880 transcription elongation factor GreA 0.26 IAI46_03210 LysE family translocator low > 86
Pseudomonas stutzeri RCH2 0.61 Psest_0969 transcription elongation factor GreA 0.28 Psest_3222 Putative threonine efflux protein low > 67
Pseudomonas sp. RS175 0.59 PFR28_00078 Transcription elongation factor GreA 0.25 PFR28_03621 Threonine efflux protein
Pseudomonas sp. S08-1 0.58 OH686_17085 Transcription elongation factor GreA 0.25 OH686_06335 L-lysine permease low > 80
Kangiella aquimarina DSM 16071 0.58 B158DRAFT_0617 transcription elongation factor GreA 0.23 B158DRAFT_0068 Putative threonine efflux protein low > 40
Pseudomonas fluorescens FW300-N2C3 0.58 AO356_07475 transcription elongation factor GreA 0.26 AO356_06930 lysine transporter LysE
Pseudomonas fluorescens FW300-N2E2 0.58 Pf6N2E2_3363 Transcription elongation factor GreA 0.26 Pf6N2E2_3245 L-lysine permease
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_4190 transcription elongation factor GreA 0.26 Psyr_2743 Lysine exporter protein (LYSE/YGGA)
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_4190 transcription elongation factor GreA 0.26 Psyr_2743 Lysine exporter protein (LYSE/YGGA)
Pseudomonas simiae WCS417 0.56 PS417_24035 transcription elongation factor GreA 0.27 PS417_04535 lysine transporter LysE
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_05625 transcription elongation factor GreA 0.26 AO353_15005 lysine transporter LysE low > 101
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_5098 Transcription elongation factor GreA 0.27 PfGW456L13_1618 L-lysine permease
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_1171 Transcription elongation factor GreA 0.26 Pf1N1B4_2955 L-lysine permease
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS14135 transcription elongation factor GreA 0.22 ABZR87_RS21900 LysE family transporter low > 80
Pseudomonas sp. SVBP6 0.55 COO64_RS15235 greA transcription elongation factor GreA 0.24 COO64_RS03395 LysE family translocator low > 93
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS25875 transcription elongation factor GreA 0.27 PFLU_RS04580 lysine transporter LysE low > 109
Pseudomonas fluorescens SBW25 0.55 PFLU_RS25875 transcription elongation factor GreA 0.27 PFLU_RS04580 lysine transporter LysE low > 109
Pseudomonas sp. DMC3 0.55 GFF4978 Transcription elongation factor GreA 0.26 GFF4453 Threonine efflux protein low > 89
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS13505 transcription elongation factor GreA 0.23 RR42_RS21510 lysine transporter LysE
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS04785 transcription elongation factor GreA 0.22 QEN71_RS00520 LysE family transporter low > 153
Sinorhizobium meliloti 1021 0.51 SMc01218 transcription elongation factor GreA 0.23 SMc02484 amino acid efflux transmembrane protein
Rhodospirillum rubrum S1H 0.49 Rru_A2887 GreA/GreB family elongation factor (NCBI) 0.14 Rru_A3712 Lysine exporter protein (LYSE/YGGA) (NCBI) low > 58
Dyella japonica UNC79MFTsu3.2 0.43 ABZR86_RS05595 transcription elongation factor GreA 0.21 ABZR86_RS11510 homoserine/threonine efflux transporter low > 74

Not shown: 53 genomes with orthologs for CSW01_03330 only; 1 genomes with orthologs for CSW01_01025 only