Conservation of cofitness between CSW01_00235 and CSW01_01025 in Vibrio cholerae E7946 ATCC 55056

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00235 peptide deformylase 1.0 CSW01_01025 LysE family translocator 0.56 20
Serratia liquefaciens MT49 0.77 IAI46_23265 peptide deformylase 0.26 IAI46_03210 LysE family translocator low > 87
Rahnella sp. WP5 0.76 EX31_RS15975 peptide deformylase 0.26 EX31_RS03810 LysE family translocator low > 89
Erwinia amylovora T8 0.75 OLJFJH_03710 peptide deformylase 0.27 OLJFJH_01390 lysine transporter LysE low > 58
Klebsiella michiganensis M5al 0.75 BWI76_RS25670 peptide deformylase 0.26 BWI76_RS01250 threonine export protein RhtC — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF2392 Peptide deformylase (EC 3.5.1.88) 0.26 GFF249 L-lysine permease low > 78
Pantoea sp. MT58 0.74 IAI47_02290 peptide deformylase 0.25 IAI47_18355 threonine export protein RhtC — —
Pantoea agglomerans CFBP13505 P0401 0.74 PagCFBP13505_RS22535 peptide deformylase 0.25 PagCFBP13505_RS15335 threonine export protein RhtC — —
Escherichia coli ECRC99 0.73 KEDOAH_10610 def peptide deformylase 0.27 KEDOAH_13795 rhtC threonine export protein RhtC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_00417 Peptide deformylase 0.27 OHPLBJKB_04228 Threonine efflux protein — —
Escherichia coli BL21 0.73 ECD_03137 peptide deformylase 0.27 ECD_03702 threonine efflux pump — —
Escherichia coli Nissle 1917 0.73 ECOLIN_RS18865 peptide deformylase 0.27 ECOLIN_RS21940 threonine export protein RhtC — —
Escherichia coli ECOR27 0.73 NOLOHH_09330 def peptide deformylase 0.27 NOLOHH_06485 rhtC threonine export protein RhtC — —
Escherichia coli ECRC98 0.73 JDDGAC_21160 def peptide deformylase 0.27 JDDGAC_17980 rhtC threonine export protein RhtC — —
Escherichia coli BW25113 0.73 b3287 def peptide deformylase (NCBI) 0.27 b3823 rhtC threonine efflux system (NCBI) — —
Dickeya dadantii 3937 0.73 DDA3937_RS19125 peptide deformylase 0.25 DDA3937_RS18300 LysE family translocator — —
Escherichia coli ECRC101 0.73 MCAODC_08060 def peptide deformylase 0.27 MCAODC_04860 rhtC threonine export protein RhtC — —
Escherichia coli ECRC102 0.73 NIAGMN_15300 def peptide deformylase 0.27 NIAGMN_12110 rhtC threonine export protein RhtC — —
Escherichia fergusonii Becca 0.73 EFB2_00537 Peptide deformylase 0.27 EFB2_04814 Threonine efflux protein — —
Escherichia coli ECRC100 0.73 OKFHMN_17530 def peptide deformylase 0.27 OKFHMN_14355 rhtC threonine export protein RhtC — —
Escherichia coli ECRC62 0.73 BNILDI_02190 def peptide deformylase 0.27 BNILDI_05045 rhtC threonine export protein RhtC — —
Escherichia coli ECOR38 0.73 HEPCGN_16360 def peptide deformylase 0.27 HEPCGN_13055 rhtC threonine export protein RhtC — —
Dickeya dianthicola ME23 0.73 DZA65_RS20340 peptide deformylase 0.25 DZA65_RS21040 threonine export protein RhtC — —
Dickeya dianthicola 67-19 0.73 HGI48_RS19215 peptide deformylase 0.24 HGI48_RS20000 threonine export protein RhtC — —
Pectobacterium carotovorum WPP14 0.73 HER17_RS02225 peptide deformylase 0.25 HER17_RS02915 LysE family translocator low > 75
Enterobacter asburiae PDN3 0.72 EX28DRAFT_0041 peptide deformylase 0.26 EX28DRAFT_4488 The Resistance to Homoserine/Threonine (RhtB) Family protein — —
Enterobacter sp. TBS_079 0.72 MPMX20_04194 Peptide deformylase 0.23 MPMX20_04457 Threonine efflux protein low > 85
Klebsiella pneumoniae MKP103 0.71 KDGMDA_06540 peptide deformylase 0.25 KDGMDA_09740 threonine export protein RhtC low > 95
Alteromonas macleodii MIT1002 0.65 MIT1002_00020 Peptide deformylase 1 0.22 MIT1002_02144 Threonine efflux protein — —
Shewanella amazonensis SB2B 0.65 Sama_0043 def peptide deformylase (RefSeq) 0.28 Sama_1550 threonine efflux protein, putative (RefSeq) — —
Kangiella aquimarina DSM 16071 0.63 B158DRAFT_0398 peptide deformylase 0.23 B158DRAFT_0068 Putative threonine efflux protein low > 40
Shewanella loihica PV-4 0.63 Shew_3736 peptide deformylase (RefSeq) 0.34 Shew_1462 lysine exporter protein LysE/YggA (RefSeq) — —
Shewanella sp. ANA-3 0.63 Shewana3_0035 def peptide deformylase (RefSeq) 0.35 Shewana3_3536 lysine exporter protein LysE/YggA (RefSeq) low > 73
Shewanella oneidensis MR-1 0.62 SO0032 def-1 polypeptide deformylase (NCBI ptt file) 0.37 SO0765 threonine efflux protein, putative (NCBI ptt file) low > 76
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_0019 peptide deformylase 0.26 Psyr_2743 Lysine exporter protein (LYSE/YGGA) — —
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_0019 peptide deformylase 0.26 Psyr_2743 Lysine exporter protein (LYSE/YGGA) — —
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_4123 Peptide deformylase (EC 3.5.1.88) 0.26 Pf6N2E2_3245 L-lysine permease — —
Pseudomonas fluorescens FW300-N2C3 0.59 AO356_11285 peptide deformylase 0.26 AO356_06930 lysine transporter LysE — —
Pseudomonas stutzeri RCH2 0.59 Psest_0023 peptide deformylase 0.28 Psest_3222 Putative threonine efflux protein — —
Pseudomonas sp. DMC3 0.59 GFF592 Peptide deformylase 0.26 GFF4453 Threonine efflux protein — —
Pseudomonas sp. RS175 0.58 PFR28_04661 Peptide deformylase 0.25 PFR28_03621 Threonine efflux protein — —
Pseudomonas fluorescens FW300-N1B4 0.58 Pf1N1B4_1912 Peptide deformylase (EC 3.5.1.88) 0.26 Pf1N1B4_2955 L-lysine permease — —
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_650 Peptide deformylase (EC 3.5.1.88) 0.27 PfGW456L13_1618 L-lysine permease — —
Pseudomonas fluorescens FW300-N2E3 0.58 AO353_10640 peptide deformylase 0.26 AO353_15005 lysine transporter LysE — —
Pseudomonas sp. SVBP6 0.57 COO64_RS02225 def peptide deformylase 0.24 COO64_RS03395 LysE family translocator — —
Pseudomonas segetis P6 0.57 ACVTMO_RS01355 def peptide deformylase 0.41 ACVTMO_RS13305 LysE family translocator — —
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS00155 peptide deformylase 0.22 QEN71_RS00520 LysE family transporter — —
Pseudomonas sp. S08-1 0.56 OH686_12515 peptide deformylase 0.25 OH686_06335 L-lysine permease — —
Pseudomonas aeruginosa PA14 0.56 IKLFDK_25465 Peptide deformylase 0.40 IKLFDK_07765 lysine transporter LysE — —
Pseudomonas aeruginosa PUPa3 0.56 DQ20_RS58700 def;go_function=peptide peptide deformylase 0.40 DQ20_RS53860 LysE family translocator — —
Pseudomonas aeruginosa MRSN321 0.56 DY961_RS26295 def;go_function=peptide peptide deformylase 0.40 DY961_RS19750 LysE family translocator — —
Pseudomonas fluorescens SBW25 0.55 PFLU_RS00090 peptide deformylase 0.27 PFLU_RS04580 lysine transporter LysE low > 109
Pseudomonas orientalis W4I3 0.55 QF045_RS03030 peptide deformylase 0.26 QF045_RS07505 LysE family transporter — —
Pseudomonas simiae WCS417 0.55 PS417_00095 peptide deformylase 0.27 PS417_04535 lysine transporter LysE — —
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS00090 peptide deformylase 0.27 PFLU_RS04580 lysine transporter LysE — —
Pseudomonas lactucae CFBP13502 0.55 GEMAOFIL_00225 Peptide deformylase 0.27 GEMAOFIL_01110 Threonine efflux protein — —
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS13880 peptide deformylase 0.21 ABZR86_RS11510 homoserine/threonine efflux transporter low > 74
Ralstonia sp. UNC404CL21Col 0.54 ABZR87_RS04975 peptide deformylase 0.22 ABZR87_RS21900 LysE family transporter low > 80
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS20470 peptide deformylase 0.23 RR42_RS21510 lysine transporter LysE — —
Rhizobium sp. OAE497 0.45 ABIE40_RS01895 peptide deformylase 0.19 ABIE40_RS07035 LysE family transporter — —
Sinorhizobium meliloti 1021 0.43 SMc01101 peptide deformylase 0.23 SMc02484 amino acid efflux transmembrane protein — —
Rhodospirillum rubrum S1H 0.40 Rru_A3350 Peptide deformylase (NCBI) 0.14 Rru_A3712 Lysine exporter protein (LYSE/YGGA) (NCBI) — —

Not shown: 56 genomes with orthologs for CSW01_00235 only; 0 genomes with orthologs for CSW01_01025 only