Conservation of cofitness between CSW01_08010 and CSW01_01005 in Vibrio cholerae E7946 ATCC 55056

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08010 MFS transporter 1.0 CSW01_01005 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.43 15
Shewanella sp. ANA-3 0.46 Shewana3_0064 major facilitator transporter (RefSeq) 0.49 Shewana3_4038 hypothetical protein (RefSeq) low > 73
Pseudomonas aeruginosa PA14 0.27 IKLFDK_24350 MFS transporter 0.43 IKLFDK_28440 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 100
Pseudomonas fluorescens SBW25 0.27 PFLU_RS07440 MFS transporter 0.38 PFLU_RS02255 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 109
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS07440 MFS transporter 0.38 PFLU_RS02255 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 109
Pseudomonas lactucae CFBP13502 0.27 GEMAOFIL_01605 Multidrug resistance protein 3 0.39 GEMAOFIL_00676 Ribosomal RNA large subunit methyltransferase J low > 93
Pseudomonas putida KT2440 0.27 PP_1388 Drug resistance transporter, EmrB/QacA family 0.44 PP_4945 23S rRNA m(6)A2030 methyltransferase low > 96
Pseudomonas simiae WCS417 0.27 PS417_07335 DSBA oxidoreductase 0.38 PS417_02200 lactate dehydrogenase — —
Pseudomonas sp. BP01 0.26 JOY50_RS14460 MDR family MFS transporter 0.41 JOY50_RS09970 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 84
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_03900 disulfide bond formation protein DsbA 0.38 AO353_12840 lactate dehydrogenase low > 101
Pseudomonas sp. RS175 0.26 PFR28_00544 Putative multidrug resistance protein MdtD 0.39 PFR28_05056 Ribosomal RNA large subunit methyltransferase J low > 88
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_1786 drug resistance transporter, EmrB/QacA family 0.38 PfGW456L13_219 Protein involved in catabolism of external DNA low > 87
Pseudomonas sp. SVBP6 0.26 COO64_RS26260 MDR family MFS transporter 0.42 COO64_RS17660 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 93
Pseudomonas fluorescens FW300-N2C3 0.25 AO356_05300 disulfide bond formation protein DsbA 0.38 AO356_08990 lactate dehydrogenase low > 104
Serratia liquefaciens MT49 0.25 IAI46_12720 MFS transporter 0.63 IAI46_24235 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.43 34
Pseudomonas fluorescens FW300-N1B4 0.25 Pf1N1B4_704 drug resistance transporter, EmrB/QacA family 0.38 Pf1N1B4_1481 Protein involved in catabolism of external DNA low > 87
Pseudomonas fluorescens FW300-N2E2 0.25 Pf6N2E2_2915 drug resistance transporter, EmrB/QacA family 0.38 Pf6N2E2_3679 Protein involved in catabolism of external DNA low > 103
Pseudomonas sp. DMC3 0.25 GFF5056 Multidrug resistance protein 3 0.40 GFF3149 Ribosomal RNA large subunit methyltransferase J low > 89
Azospirillum brasilense Sp245 0.25 AZOBR_RS10785 transporter 0.48 AZOBR_RS21900 lactate dehydrogenase low > 97
Bosea sp. OAE506 0.23 ABIE41_RS01910 MDR family MFS transporter 0.37 ABIE41_RS11490 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 77
Azospirillum sp. SherDot2 0.23 MPMX19_00797 Multidrug resistance protein 3 0.46 MPMX19_01202 Ribosomal RNA large subunit methyltransferase J low > 112
Cupriavidus basilensis FW507-4G11 0.23 RR42_RS00325 MFS transporter 0.40 RR42_RS09005 competence protein ComJ low > 128
Enterobacter sp. TBS_079 0.23 MPMX20_00062 Multidrug resistance protein 3 0.64 MPMX20_04398 Ribosomal RNA large subunit methyltransferase J low > 85
Klebsiella pneumoniae MKP103 0.23 KDGMDA_08315 EmrB/QacA family drug resistance transporter 0.64 KDGMDA_07435 Ribosomal RNA large subunit methyltransferase J low > 95
Burkholderia phytofirmans PsJN 0.23 BPHYT_RS24280 DSBA oxidoreductase 0.40 BPHYT_RS06880 competence protein ComJ low > 109
Pseudomonas syringae pv. syringae B728a 0.23 Psyr_4004 Drug resistance transporter EmrB/QacA subfamily 0.38 Psyr_4772 Protein of unknown function DUF519 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.23 Psyr_4004 Drug resistance transporter EmrB/QacA subfamily 0.38 Psyr_4772 Protein of unknown function DUF519 low > 86
Ralstonia sp. UNC404CL21Col 0.23 ABZR87_RS18795 MDR family MFS transporter 0.42 ABZR87_RS04360 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 80
Paraburkholderia sabiae LMG 24235 0.23 QEN71_RS07930 MDR family MFS transporter 0.41 QEN71_RS23895 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 153
Rahnella sp. WP5 0.23 EX31_RS05285 MFS transporter 0.65 EX31_RS05170 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 89
Klebsiella michiganensis M5al 0.23 BWI76_RS27675 EmrB/QacA family drug resistance transporter 0.64 BWI76_RS26680 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 92
Ralstonia solanacearum PSI07 0.22 RPSI07_RS05785 MFS transporter 0.41 RPSI07_RS08205 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 81
Rhizobium sp. OAE497 0.22 ABIE40_RS18620 MDR family MFS transporter 0.41 ABIE40_RS06520 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 107
Variovorax sp. SCN45 0.22 GFF136 Uncharacterized MFS-type transporter 0.31 GFF2057 23S rRNA (adenine(2030)-N(6))-methyltransferase (EC 2.1.1.266) low > 127
Ralstonia solanacearum GMI1000 0.22 RS_RS23200 MFS transporter 0.40 RS_RS16875 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.27 44
Xanthobacter sp. DMC5 0.21 GFF935 Multidrug resistance protein 3 0.32 GFF4654 Ribosomal RNA large subunit methyltransferase J — —
Agrobacterium fabrum C58 0.21 Atu0838 MFS permease 0.43 Atu1135 hypothetical protein low > 89
Herbaspirillum seropedicae SmR1 0.19 HSERO_RS09275 DSBA oxidoreductase 0.41 HSERO_RS10595 competence protein ComJ low > 78
Pantoea sp. MT58 0.18 IAI47_09785 MFS transporter 0.61 IAI47_01340 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 76
Erwinia amylovora T8 0.18 OLJFJH_14265 MFS transporter 0.63 OLJFJH_04555 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 58
Pectobacterium carotovorum WPP14 0.18 HER17_RS10725 MFS transporter 0.62 HER17_RS21245 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 75
Pantoea agglomerans CFBP13505 P0401 0.18 PagCFBP13505_RS06370 MFS transporter 0.61 PagCFBP13505_RS17840 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 74
Pseudomonas stutzeri RCH2 0.14 Psest_0847 drug resistance transporter, EmrB/QacA subfamily 0.42 Psest_0408 Protein involved in catabolism of external DNA low > 67
Hydrogenophaga sp. GW460-11-11-14-LB1 0.13 GFF189 MFS permease 0.33 GFF1683 Protein involved in catabolism of external DNA 0.48 60
Erwinia tracheiphila SCR3 0.13 LU632_RS13235 MFS transporter 0.62 LU632_RS19485 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 74
Erwinia tracheiphila HP pepo 2.2 0.13 IJEDHG_22350 Multidrug MFS transporter 0.62 IJEDHG_12575 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 61
Dyella japonica UNC79MFTsu3.2 0.13 ABZR86_RS01865 MFS transporter 0.37 ABZR86_RS21180 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 74
Enterobacter asburiae PDN3 0.13 EX28DRAFT_0728 Major Facilitator Superfamily 0.65 EX28DRAFT_4062 Protein involved in catabolism of external DNA low > 76
Brevundimonas sp. GW460-12-10-14-LB2 0.12 A4249_RS05645 MFS transporter 0.22 A4249_RS02525 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 48
Rhodanobacter sp000427505 FW510-R12 0.12 LRK53_RS11570 MFS transporter 0.38 LRK53_RS08040 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 59
Rhodanobacter sp. FW510-T8 0.12 OKGIIK_07515 MFS transporter 0.36 OKGIIK_04560 rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 53

Not shown: 3 genomes with orthologs for CSW01_08010 only; 45 genomes with orthologs for CSW01_01005 only