Conservation of cofitness between CSW01_04460 and CSW01_00560 in Vibrio cholerae E7946 ATCC 55056

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04460 lytic transglycosylase F 1.0 CSW01_00560 DNA polymerase I 0.75 6
Erwinia tracheiphila SCR3 0.44 LU632_RS17980 mltF membrane-bound lytic murein transglycosylase MltF 0.64 LU632_RS23870 polA DNA polymerase I
Erwinia tracheiphila HP pepo 2.2 0.44 IJEDHG_02975 mltF membrane-bound lytic murein transglycosylase MltF 0.64 IJEDHG_10990 polA DNA polymerase I
Pantoea agglomerans CFBP13505 P0401 0.43 PagCFBP13516_RS05215 mltF membrane-bound lytic murein transglycosylase MltF 0.64 PagCFBP13516_RS00410 polA DNA polymerase I low > 80
Pantoea sp. MT58 0.43 IAI47_04925 membrane-bound lytic murein transglycosylase MltF 0.65 IAI47_00430 DNA polymerase I low > 76
Rahnella sp. WP5 0.43 EX31_RS21890 membrane-bound lytic murein transglycosylase MltF 0.65 EX31_RS15905 DNA polymerase I low > 89
Serratia liquefaciens MT49 0.43 IAI46_19480 membrane-bound lytic murein transglycosylase MltF 0.66 IAI46_24985 DNA polymerase I low > 87
Dickeya dadantii 3937 0.43 DDA3937_RS15660 membrane-bound lytic murein transglycosylase MltF 0.63 DDA3937_RS00105 DNA polymerase I
Dickeya dianthicola 67-19 0.43 HGI48_RS15755 membrane-bound lytic murein transglycosylase MltF 0.63 HGI48_RS21260 DNA polymerase I
Dickeya dianthicola ME23 0.42 DZA65_RS16835 membrane-bound lytic murein transglycosylase MltF 0.62 DZA65_RS22235 DNA polymerase I
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF2461 Transglycosylase, Slt family 0.63 GFF2216 DNA polymerase I (EC 2.7.7.7) low > 78
Enterobacter sp. TBS_079 0.42 MPMX20_03427 Membrane-bound lytic murein transglycosylase F 0.64 MPMX20_04601 DNA polymerase I low > 85
Escherichia coli BW25113 0.42 b2558 mltF predicted periplasmic binding protein/transglycosylase (RefSeq) 0.64 b3863 polA DNA polymerase I (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.42 OHPLBJKB_01149 Membrane-bound lytic murein transglycosylase F 0.64 OHPLBJKB_04189 DNA polymerase I
Escherichia coli ECOR38 0.42 HEPCGN_20610 mltF membrane-bound lytic murein transglycosylase MltF 0.64 HEPCGN_12785 polA DNA polymerase I
Escherichia coli ECOR27 0.42 NOLOHH_13140 mltF membrane-bound lytic murein transglycosylase MltF 0.64 NOLOHH_06280 polA DNA polymerase I
Escherichia coli ECRC99 0.42 KEDOAH_06755 mltF membrane-bound lytic murein transglycosylase MltF 0.64 KEDOAH_14000 polA DNA polymerase I
Escherichia coli Nissle 1917 0.42 ECOLIN_RS14475 membrane-bound lytic murein transglycosylase MltF 0.64 ECOLIN_RS22270 DNA polymerase I
Escherichia coli ECRC100 0.42 OKFHMN_21465 mltF membrane-bound lytic murein transglycosylase MltF 0.64 OKFHMN_14150 polA DNA polymerase I
Escherichia coli ECRC98 0.42 JDDGAC_25130 mltF membrane-bound lytic murein transglycosylase MltF 0.64 JDDGAC_17775 polA DNA polymerase I
Escherichia coli ECRC102 0.42 NIAGMN_19235 mltF membrane-bound lytic murein transglycosylase MltF 0.64 NIAGMN_11905 polA DNA polymerase I
Escherichia coli ECRC101 0.42 MCAODC_11995 mltF membrane-bound lytic murein transglycosylase MltF 0.64 MCAODC_04650 polA DNA polymerase I
Escherichia fergusonii Becca 0.42 EFB2_01338 Membrane-bound lytic murein transglycosylase F 0.64 EFB2_04753 DNA polymerase I
Escherichia coli ECRC62 0.42 BNILDI_11940 mltF membrane-bound lytic murein transglycosylase MltF 0.64 BNILDI_05250 polA DNA polymerase I
Erwinia amylovora T8 0.41 OLJFJH_10300 membrane-bound lytic murein transglycosylase MltF 0.64 OLJFJH_05470 DNA polymerase I 0.54 45
Pectobacterium carotovorum WPP14 0.41 HER17_RS05905 membrane-bound lytic murein transglycosylase MltF 0.65 HER17_RS21470 DNA polymerase I
Enterobacter asburiae PDN3 0.41 EX28DRAFT_0090 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein 0.64 EX28DRAFT_4343 DNA polymerase I (EC 2.7.7.7)
Shewanella amazonensis SB2B 0.39 Sama_2351 Slt family transglycosylase (RefSeq) 0.63 Sama_0093 DNA-directed DNA polymerase (RefSeq) low > 62
Shewanella loihica PV-4 0.38 Shew_1300 lytic transglycosylase, catalytic (RefSeq) 0.63 Shew_3714 DNA polymerase I (RefSeq) low > 60
Kangiella aquimarina DSM 16071 0.37 B158DRAFT_2243 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein 0.59 B158DRAFT_0499 DNA polymerase I (EC 2.7.7.7) low > 40
Alteromonas macleodii MIT1002 0.37 MIT1002_01026 Membrane-bound lytic murein transglycosylase F precursor 0.62 MIT1002_00014 DNA polymerase I low > 70
Shewanella sp. ANA-3 0.36 Shewana3_1239 lytic transglycosylase, catalytic (RefSeq) 0.62 Shewana3_4109 DNA polymerase I (RefSeq)
Pseudomonas stutzeri RCH2 0.33 Psest_1217 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein 0.58 Psest_4219 DNA polymerase I low > 67
Pseudomonas fluorescens SBW25 0.32 PFLU_RS24690 membrane-bound lytic murein transglycosylase MltF 0.55 PFLU_RS00395 DNA polymerase I low > 109
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS24690 membrane-bound lytic murein transglycosylase MltF 0.55 PFLU_RS00395 DNA polymerase I low > 109
Pseudomonas sp. DMC3 0.32 GFF1961 Membrane-bound lytic murein transglycosylase F 0.55 GFF631 DNA polymerase I low > 89
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_4836 Transglycosylase, Slt family 0.54 PfGW456L13_594 DNA polymerase I (EC 2.7.7.7) low > 87
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_17515 murein transglycosylase 0.55 AO356_11465 DNA polymerase I low > 104
Marinobacter adhaerens HP15 0.32 HP15_1238 transglycosylase, Slt family protein 0.52 HP15_293 DNA polymerase I low > 73
Pseudomonas simiae WCS417 0.32 PS417_23025 murein transglycosylase 0.56 PS417_00405 DNA polymerase I 0.37 55
Pseudomonas sp. RS175 0.32 PFR28_03519 Membrane-bound lytic murein transglycosylase F 0.54 PFR28_04624 DNA polymerase I low > 88
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_888 Transglycosylase, Slt family 0.55 Pf1N1B4_1875 DNA polymerase I (EC 2.7.7.7)
Pseudomonas orientalis W4I3 0.32 QF045_RS25235 membrane-bound lytic murein transglycosylase MltF 0.56 QF045_RS03350 DNA polymerase I low > 93
Pseudomonas segetis P6 0.31 ACVTMO_RS07700 mltF membrane-bound lytic murein transglycosylase MltF 0.57 ACVTMO_RS01575 polA DNA polymerase I low > 75
Pseudomonas sp. SVBP6 0.31 COO64_RS04690 mltF membrane-bound lytic murein transglycosylase MltF 0.57 COO64_RS02475 polA DNA polymerase I low > 91
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_04490 murein transglycosylase 0.56 AO353_10930 DNA polymerase I 0.46 23
Pseudomonas aeruginosa MRSN321 0.31 DY961_RS14140 mltF;go_component=membrane|0016020||IEA;go_function=lytic membrane-bound lytic murein transglycosylase MltF 0.58 DY961_RS25765 polA;go_function=nucleic DNA polymerase I low > 99
Pseudomonas aeruginosa PUPa3 0.31 DQ20_RS42975 mltF;go_component=membrane|0016020||IEA;go_function=lytic membrane-bound lytic murein transglycosylase MltF 0.58 DQ20_RS58195 polA;go_function=nucleic DNA polymerase I low > 101
Pseudomonas putida KT2440 0.31 PP_1036 membrane-bound lytic murein transglycosylase F 0.58 PP_0123 DNA polymerase I, 5 low > 96
Pseudomonas protegens RBAN4 0.31 FABNJH_05560 mltF membrane-bound lytic murein transglycosylase MltF 0.56 FABNJH_00420 polA DNA polymerase I
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_1268 extracellular solute-binding protein, family 3:SLT 0.55 Psyr_0270 DNA polymerase I low > 86
Pseudomonas fluorescens FW300-N2E2 0.30 Pf6N2E2_5430 Transglycosylase, Slt family 0.54 Pf6N2E2_4162 DNA polymerase I (EC 2.7.7.7) 0.32 53
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_1268 extracellular solute-binding protein, family 3:SLT 0.55 Psyr_0270 DNA polymerase I low > 86
Pseudomonas sp. BP01 0.30 JOY50_RS11520 mltF membrane-bound lytic murein transglycosylase MltF 0.58 JOY50_RS21110 polA DNA polymerase I low > 84
Pseudomonas aeruginosa PA14 0.30 IKLFDK_19215 membrane-bound lytic murein transglycosylase MltF 0.58 IKLFDK_25945 DNA polymerase I low > 98
Pseudomonas sp. S08-1 0.30 OH686_17625 Membrane-bound lytic murein transglycosylase F 0.57 OH686_12215 DNA polymerase I low > 80
Pseudomonas lactucae CFBP13502 0.30 GEMAOFIL_04758 Membrane-bound lytic murein transglycosylase F 0.55 GEMAOFIL_00284 DNA polymerase I low > 96

Not shown: 0 genomes with orthologs for CSW01_04460 only; 61 genomes with orthologs for CSW01_00560 only