Conservation of cofitness between CA265_RS22400 and CA265_RS03640 in Pedobacter sp. GW460-11-11-14-LB5

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pedobacter sp. GW460-11-11-14-LB5 1.0 CA265_RS22400 AAA family ATPase 1.0 CA265_RS03640 ATP phosphoribosyltransferase 0.50 19
Mucilaginibacter yixingensis YX-36 DSM 26809 0.76 ABZR88_RS20285 replication-associated recombination protein A 0.78 ABZR88_RS06885 ATP phosphoribosyltransferase low > 71
Pontibacter actiniarum KMM 6156, DSM 19842 0.68 CA264_02215 AAA family ATPase 0.53 CA264_05025 ATP phosphoribosyltransferase low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.65 Echvi_4603 ATPase related to the helicase subunit of the Holliday junction resolvase 0.52 Echvi_2460 ATP phosphoribosyltransferase low > 79
Bacteroides ovatus ATCC 8483 0.65 BACOVA_03971 ATPase, AAA family 0.48 BACOVA_01235 ATP phosphoribosyltransferase low > 94
Parabacteroides merdae CL09T00C40 0.64 HMPREF1078_RS15395 replication-associated recombination protein A 0.52 HMPREF1078_RS02455 ATP phosphoribosyltransferase low > 61
Phocaeicola dorei CL03T12C01 0.63 ABI39_RS20200 replication-associated recombination protein A 0.50 ABI39_RS11830 ATP phosphoribosyltransferase low > 72
Bacteroides thetaiotaomicron VPI-5482 0.63 BT1205 putative ATPase, AAA family (NCBI ptt file) 0.51 BT0200 ATP phosphoribosyltransferase (NCBI ptt file) low > 81
Phocaeicola vulgatus CL09T03C04 0.62 HMPREF1058_RS06440 replication-associated recombination protein A 0.50 HMPREF1058_RS15870 ATP phosphoribosyltransferase low > 67
Bacteroides stercoris CC31F 0.62 HMPREF1181_RS16975 replication-associated recombination protein A 0.50 HMPREF1181_RS04865 ATP phosphoribosyltransferase low > 56
Alteromonas macleodii MIT1002 0.46 MIT1002_02178 Replication-associated recombination protein A 0.40 MIT1002_02632 ATP phosphoribosyltransferase low > 70
Shewanella amazonensis SB2B 0.44 Sama_1774 recombination factor protein RarA (RefSeq) 0.42 Sama_1941 hisG ATP phosphoribosyltransferase (RefSeq) low > 62
Shewanella loihica PV-4 0.43 Shew_2022 recombination factor protein RarA (RefSeq) 0.42 Shew_2197 hisG ATP phosphoribosyltransferase (RefSeq) low > 60
Shewanella sp. ANA-3 0.43 Shewana3_2052 recombination factor protein RarA (RefSeq) 0.41 Shewana3_1854 hisG ATP phosphoribosyltransferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.43 SO2308 ATPase, AAA family (NCBI ptt file) 0.41 SO2074 hisG ATP phosphoribosyltransferase (NCBI ptt file) low > 76
Kangiella aquimarina DSM 16071 0.43 B158DRAFT_1819 ATPase related to the helicase subunit of the Holliday junction resolvase 0.24 B158DRAFT_2287 ATP phosphoribosyltransferase low > 40
Klebsiella michiganensis M5al 0.43 BWI76_RS09670 recombination factor protein RarA 0.41 BWI76_RS18920 ATP phosphoribosyltransferase low > 92
Rhodanobacter denitrificans FW104-10B01 0.42 LRK54_RS17320 replication-associated recombination protein A 0.36 LRK54_RS01610 ATP phosphoribosyltransferase low > 59
Rhodanobacter denitrificans MT42 0.42 LRK55_RS17545 replication-associated recombination protein A 0.36 LRK55_RS01390 ATP phosphoribosyltransferase low > 63
Enterobacter asburiae PDN3 0.42 EX28DRAFT_2040 ATPase related to the helicase subunit of the Holliday junction resolvase 0.41 EX28DRAFT_0540 ATP phosphoribosyltransferase low > 76
Brevundimonas sp. GW460-12-10-14-LB2 0.42 A4249_RS07890 replication-associated recombination protein A 0.44 A4249_RS10690 ATP phosphoribosyltransferase low > 48
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS01825 replication-associated recombination protein A 0.37 ABZR86_RS06735 ATP phosphoribosyltransferase low > 74
Serratia liquefaciens MT49 0.42 IAI46_08570 replication-associated recombination protein A 0.40 IAI46_08215 ATP phosphoribosyltransferase low > 86
Rhodanobacter sp. FW510-T8 0.42 OKGIIK_07580 rarA recombination factor protein RarA 0.36 OKGIIK_04945 hisG ATP phosphoribosyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF4896 FIG065221: Holliday junction DNA helicase 0.41 GFF3913 ATP phosphoribosyltransferase (EC 2.4.2.17) low > 78
Escherichia coli ECOR27 0.42 NOLOHH_22130 rarA replication-associated recombination protein RarA 0.40 NOLOHH_15835 hisG ATP phosphoribosyltransferase low > 75
Escherichia coli ECOR38 0.42 HEPCGN_22950 rarA replication-associated recombination protein RarA 0.40 HEPCGN_03225 hisG ATP phosphoribosyltransferase low > 87
Escherichia coli BL21 0.42 ECD_00896 recombination intermediate processing DNA-dependent ATPase 0.40 ECD_01921 ATP phosphoribosyltransferase low > 61
Escherichia coli ECRC100 0.42 OKFHMN_05560 rarA replication-associated recombination protein RarA 0.40 OKFHMN_24520 hisG ATP phosphoribosyltransferase low > 80
Escherichia coli ECRC62 0.42 BNILDI_20385 rarA replication-associated recombination protein RarA 0.40 BNILDI_14745 hisG ATP phosphoribosyltransferase low > 75
Escherichia coli Nissle 1917 0.42 ECOLIN_RS04745 replication-associated recombination protein RarA 0.40 ECOLIN_RS11940 ATP phosphoribosyltransferase — —
Escherichia coli BW25113 0.42 b0892 ycaJ recombination protein (NCBI) 0.40 b2019 hisG ATP phosphoribosyltransferase (NCBI) low > 76
Escherichia coli ECRC102 0.42 NIAGMN_03280 rarA replication-associated recombination protein RarA 0.40 NIAGMN_22465 hisG ATP phosphoribosyltransferase — —
Escherichia fergusonii Becca 0.42 EFB2_03169 Replication-associated recombination protein A 0.40 EFB2_01837 ATP phosphoribosyltransferase low > 86
Escherichia coli ECRC99 0.42 KEDOAH_22175 rarA replication-associated recombination protein RarA 0.40 KEDOAH_03630 hisG ATP phosphoribosyltransferase — —
Escherichia coli ECRC101 0.42 MCAODC_24950 rarA replication-associated recombination protein RarA 0.40 MCAODC_20420 hisG ATP phosphoribosyltransferase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.42 OHPLBJKB_02776 Replication-associated recombination protein A 0.40 OHPLBJKB_01681 ATP phosphoribosyltransferase low > 73
Escherichia coli ECRC98 0.42 JDDGAC_09370 rarA replication-associated recombination protein RarA 0.40 JDDGAC_28630 hisG ATP phosphoribosyltransferase low > 86
Xanthomonas campestris pv. campestris strain 8004 0.41 Xcc-8004.2744.1 FIG065221: Holliday junction DNA helicase 0.32 Xcc-8004.2949.1 ATP phosphoribosyltransferase (EC 2.4.2.17) low > 74
Enterobacter sp. TBS_079 0.41 MPMX20_01554 Replication-associated recombination protein A 0.41 MPMX20_03001 ATP phosphoribosyltransferase low > 85
Pantoea sp. MT58 0.41 IAI47_12900 replication-associated recombination protein A 0.40 IAI47_07095 ATP phosphoribosyltransferase low > 76
Dickeya dadantii 3937 0.41 DDA3937_RS09605 replication-associated recombination protein A 0.39 DDA3937_RS09740 ATP phosphoribosyltransferase low > 74
Rahnella sp. WP5 0.41 EX31_RS18515 replication-associated recombination protein A 0.39 EX31_RS11435 ATP phosphoribosyltransferase low > 89
Bifidobacterium breve UCC2003 0.41 BBR_RS17330 replication-associated recombination protein A 0.26 BBR_RS15790 ATP phosphoribosyltransferase low > 34
Dickeya dianthicola 67-19 0.41 HGI48_RS09620 replication-associated recombination protein A 0.40 HGI48_RS09750 ATP phosphoribosyltransferase low > 71
Dickeya dianthicola ME23 0.41 DZA65_RS09930 replication-associated recombination protein A 0.40 DZA65_RS10060 ATP phosphoribosyltransferase low > 75
Vibrio cholerae E7946 ATCC 55056 0.41 CSW01_05630 replication-associated recombination protein A 0.41 CSW01_05745 ATP phosphoribosyltransferase low > 62
Erwinia tracheiphila SCR3 0.41 LU632_RS09755 replication-associated recombination protein A 0.40 LU632_RS08950 hisG ATP phosphoribosyltransferase low > 74
Pectobacterium carotovorum WPP14 0.40 HER17_RS12345 replication-associated recombination protein A 0.39 HER17_RS12225 ATP phosphoribosyltransferase low > 75
Bosea sp. OAE506 0.38 ABIE41_RS14690 replication-associated recombination protein A 0.14 ABIE41_RS22120 ATP phosphoribosyltransferase low > 77
Lysobacter sp. OAE881 0.37 ABIE51_RS11445 replication-associated recombination protein A 0.35 ABIE51_RS13330 ATP phosphoribosyltransferase low > 62
Mycobacterium tuberculosis H37Rv 0.36 Rv2559c Conserved hypothetical alanine leucine valine rich protein 0.26 Rv2121c ATP phosphoribosyltransferase HisG — —
Desulfovibrio vulgaris Miyazaki F 0.35 DvMF_0339 recombination factor protein RarA (RefSeq) 0.24 DvMF_1963 hisG ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) low > 51
Desulfovibrio vulgaris Hildenborough JW710 0.34 DVU1686 ATPase, AAA family (TIGR) 0.23 DVU0114 hisG ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) low > 55

Not shown: 46 genomes with orthologs for CA265_RS22400 only; 2 genomes with orthologs for CA265_RS03640 only