Conservation of cofitness between BPHYT_RS16080 and BPHYT_RS33535 in Burkholderia phytofirmans PsJN

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS16080 xylulokinase 1.0 BPHYT_RS33535 RNA polymerase sigma factor RpoD 0.35 19
Paraburkholderia bryophila 376MFSha3.1 0.96 H281DRAFT_04153 xylulokinase 0.92 H281DRAFT_06008 RNA polymerase, sigma 70 subunit, RpoD low > 103
Paraburkholderia graminis OAS925 0.96 ABIE53_003390 xylulokinase 0.91 ABIE53_004866 RNA polymerase primary sigma factor low > 113
Paraburkholderia sabiae LMG 24235 0.86 QEN71_RS02625 xylulokinase 0.91 QEN71_RS15185 RNA polymerase sigma factor RpoD low > 153
Ralstonia solanacearum GMI1000 0.77 RS_RS10680 xylulokinase 0.74 RS_RS11120 RNA polymerase sigma factor RpoD — —
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS18660 xylulokinase 0.74 ABZR87_RS15600 RNA polymerase sigma factor RpoD — —
Klebsiella michiganensis M5al 0.61 BWI76_RS19340 xylulokinase 0.47 BWI76_RS24555 RNA polymerase sigma factor RpoD — —
Variovorax sp. SCN45 0.53 GFF5281 Xylulose kinase (EC 2.7.1.17) 0.60 GFF2879 RNA polymerase sigma factor RpoD — —
Variovorax sp. OAS795 0.51 ABID97_RS07155 xylulokinase 0.60 ABID97_RS10535 RNA polymerase sigma factor RpoD — —
Pectobacterium carotovorum WPP14 0.50 HER17_RS21090 xylulokinase 0.46 HER17_RS18415 RNA polymerase sigma factor RpoD — —
Escherichia coli ECOR38 0.49 HEPCGN_14845 xylB xylulokinase 0.46 HEPCGN_17510 rpoD RNA polymerase sigma factor RpoD — —
Escherichia coli ECOR27 0.49 NOLOHH_07905 xylB xylulokinase 0.46 NOLOHH_10445 rpoD RNA polymerase sigma factor RpoD — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.49 OHPLBJKB_00140 Xylulose kinase 0.46 OHPLBJKB_00635 RNA polymerase sigma factor RpoD — —
Escherichia coli BL21 0.49 ECD_03416 xylulokinase 0.46 ECD_02937 RNA polymerase, sigma 70 (sigma D) factor — —
Escherichia coli ECRC99 0.49 KEDOAH_12190 xylB xylulokinase 0.46 KEDOAH_09490 rpoD RNA polymerase sigma factor RpoD — —
Escherichia coli ECRC98 0.49 JDDGAC_19590 xylB xylulokinase 0.46 JDDGAC_22290 rpoD RNA polymerase sigma factor RpoD — —
Escherichia coli ECRC102 0.49 NIAGMN_13720 xylB xylulokinase 0.46 NIAGMN_16420 rpoD RNA polymerase sigma factor RpoD — —
Escherichia coli ECRC101 0.49 MCAODC_06475 xylB xylulokinase 0.46 MCAODC_09170 rpoD RNA polymerase sigma factor RpoD — —
Escherichia coli ECRC100 0.49 OKFHMN_15960 xylB xylulokinase 0.46 OKFHMN_18655 rpoD RNA polymerase sigma factor RpoD — —
Escherichia coli BW25113 0.49 b3564 xylB xylulokinase (NCBI) 0.46 b3067 rpoD RNA polymerase sigma factor (NCBI) — —
Escherichia coli ECRC62 0.49 BNILDI_03640 xylB xylulokinase 0.46 BNILDI_01070 rpoD RNA polymerase sigma factor RpoD — —
Escherichia fergusonii Becca 0.49 EFB2_00243 Xylulose kinase 0.46 EFB2_00744 RNA polymerase sigma factor RpoD — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.48 GFF445 Xylulose kinase (EC 2.7.1.17) 0.47 GFF3177 RNA polymerase sigma factor RpoD — —
Dickeya dadantii 3937 0.48 DDA3937_RS20940 xylulokinase 0.46 DDA3937_RS02945 RNA polymerase sigma factor RpoD — —
Acidovorax sp. GW101-3H11 0.48 Ac3H11_2937 Xylulose kinase (EC 2.7.1.17) 0.60 Ac3H11_194 RNA polymerase sigma factor RpoD — —
Pantoea sp. MT58 0.48 IAI47_00200 xylulokinase 0.46 IAI47_03050 RNA polymerase sigma factor RpoD — —
Agrobacterium fabrum C58 0.48 Atu4482 xylulokinase 0.36 Atu2167 RNA polymerase sigma factor RpoD — —
Enterobacter sp. TBS_079 0.47 MPMX20_00166 Xylulose kinase 0.47 MPMX20_03909 RNA polymerase sigma factor RpoD — —
Sinorhizobium meliloti 1021 0.47 SMc03164 Xylulose kinase (EC 2.7.1.17) (from data) 0.36 SMc01563 RNA polymerase sigma factor RpoD — —
Serratia liquefaciens MT49 0.47 IAI46_00275 xylulokinase 0.47 IAI46_22125 RNA polymerase sigma factor RpoD — —
Dickeya dianthicola 67-19 0.47 HGI48_RS00305 xylulokinase 0.46 HGI48_RS03110 RNA polymerase sigma factor RpoD — —
Dickeya dianthicola ME23 0.47 DZA65_RS00300 xylulokinase 0.46 DZA65_RS03105 RNA polymerase sigma factor RpoD — —
Enterobacter asburiae PDN3 0.47 EX28DRAFT_3829 D-xylulose kinase 0.47 EX28DRAFT_3102 RNA polymerase, sigma 70 subunit, RpoD — —
Rahnella sp. WP5 0.46 EX31_RS09770 xylulokinase 0.46 EX31_RS08195 RNA polymerase sigma factor RpoD — —
Pseudomonas simiae WCS417 0.46 PS417_13655 xylulose kinase 0.46 PS417_25880 RNA polymerase subunit sigma-70 — —
Pseudomonas fluorescens SBW25 0.44 PFLU_RS15190 xylulokinase 0.46 PFLU_RS27535 RNA polymerase sigma factor RpoD — —
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS15190 xylulokinase 0.46 PFLU_RS27535 RNA polymerase sigma factor RpoD — —
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS14425 xylulokinase 0.47 ABZR86_RS13945 RNA polymerase sigma factor RpoD — —
Phaeobacter inhibens DSM 17395 0.39 PGA1_c14010 Xylulose kinase (EC 2.7.1.17) (from data) 0.36 PGA1_c08800 RNA polymerase sigma factor RpoD — —
Pseudomonas sp. RS175 0.24 PFR28_01708 Xylulose kinase 0.46 PFR28_04078 RNA polymerase sigma factor RpoD — —
Pseudomonas syringae pv. syringae B728a 0.24 Psyr_2435 Xylulokinase 0.47 Psyr_4641 RNA polymerase, sigma 70 subunit, RpoD — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.24 Psyr_2435 Xylulokinase 0.47 Psyr_4641 RNA polymerase, sigma 70 subunit, RpoD — —
Pseudomonas fluorescens FW300-N2E3 0.23 AO353_25905 xylulose kinase 0.46 AO353_07385 RNA polymerase subunit sigma-70 — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.23 GFF4370 Xylulose kinase (EC 2.7.1.17) 0.59 GFF3822 RNA polymerase sigma factor RpoD — —
Pseudomonas fluorescens FW300-N2E2 0.23 Pf6N2E2_805 Xylulose kinase (EC 2.7.1.17) (from data) 0.46 Pf6N2E2_4791 RNA polymerase sigma factor RpoD — —
Pseudomonas fluorescens FW300-N1B4 0.23 Pf1N1B4_4845 Xylulose kinase (EC 2.7.1.17) 0.46 Pf1N1B4_2513 RNA polymerase sigma factor RpoD — —
Lysobacter sp. OAE881 0.23 ABIE51_RS03610 xylulokinase 0.45 ABIE51_RS02310 RNA polymerase sigma factor RpoD — —
Pseudomonas fluorescens FW300-N2C3 0.23 AO356_27695 Xylulose kinase (EC 2.7.1.17) (from data) 0.46 AO356_14265 RNA polymerase subunit sigma-70 — —
Pseudomonas fluorescens GW456-L13 0.23 PfGW456L13_3037 Xylulose kinase (EC 2.7.1.17) 0.46 PfGW456L13_1186 RNA polymerase sigma factor RpoD — —
Xanthomonas campestris pv. campestris strain 8004 0.21 Xcc-8004.3065.1 Xylulose kinase (EC 2.7.1.17) 0.44 Xcc-8004.4729.1 RNA polymerase sigma factor RpoD — —
Rhodanobacter denitrificans FW104-10B01 0.16 LRK54_RS15410 FGGY-family carbohydrate kinase 0.46 LRK54_RS07325 RNA polymerase sigma factor RpoD — —
Rhodanobacter denitrificans MT42 0.16 LRK55_RS15130 FGGY-family carbohydrate kinase 0.46 LRK55_RS07055 RNA polymerase sigma factor RpoD — —
Bosea sp. OAE506 0.15 ABIE41_RS05130 FGGY-family carbohydrate kinase 0.36 ABIE41_RS11995 RNA polymerase sigma factor RpoD — —

Not shown: 14 genomes with orthologs for BPHYT_RS16080 only; 24 genomes with orthologs for BPHYT_RS33535 only