Conservation of cofitness between BPHYT_RS13975 and BPHYT_RS14615 in Burkholderia phytofirmans PsJN

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS13975 LysR family transcriptional regulator 1.0 BPHYT_RS14615 fumarate hydratase 0.22 19
Paraburkholderia bryophila 376MFSha3.1 0.85 H281DRAFT_04446 transcriptional regulator, LysR family 0.94 H281DRAFT_04314 fumarase, class II low > 103
Paraburkholderia graminis OAS925 0.82 ABIE53_002962 DNA-binding transcriptional LysR family regulator 0.95 ABIE53_003084 fumarate hydratase class II low > 113
Paraburkholderia sabiae LMG 24235 0.74 QEN71_RS04990 LysR family transcriptional regulator 0.88 QEN71_RS04360 class II fumarate hydratase low > 153
Herbaspirillum seropedicae SmR1 0.50 HSERO_RS19620 LysR family transcriptional regulator 0.70 HSERO_RS07610 fumarate hydratase low > 78
Ralstonia solanacearum GMI1000 0.48 RS_RS04040 LysR family transcriptional regulator 0.75 RS_RS23320 class II fumarate hydratase low > 80
Ralstonia solanacearum PSI07 0.48 RPSI07_RS19975 LysR family transcriptional regulator 0.76 RPSI07_RS05900 class II fumarate hydratase low > 81
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS09325 LysR family transcriptional regulator 0.76 ABZR87_RS18630 class II fumarate hydratase low > 80
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS15135 LysR family transcriptional regulator 0.56 RR42_RS33090 fumarate hydratase low > 128
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS13245 LysR family transcriptional regulator 0.75 RALBFv3_RS17680 class II fumarate hydratase
Ralstonia solanacearum UW163 0.46 UW163_RS00325 LysR family transcriptional regulator 0.75 UW163_RS21470 class II fumarate hydratase
Dechlorosoma suillum PS 0.46 Dsui_1858 transcriptional regulator 0.65 Dsui_0926 fumarate hydratase, class II low > 51
Pectobacterium carotovorum WPP14 0.42 HER17_RS12785 LysR family transcriptional regulator 0.73 HER17_RS10755 class II fumarate hydratase low > 75
Acidovorax sp. GW101-3H11 0.42 Ac3H11_3363 LysR-family transcriptional regulator PA4203 0.71 Ac3H11_943 Fumarate hydratase class II (EC 4.2.1.2) low > 79
Pantoea sp. MT58 0.42 IAI47_06710 LysR family transcriptional regulator 0.72 IAI47_10335 class II fumarate hydratase low > 76
Pseudomonas sp. S08-1 0.41 OH686_10480 Transcriptional regulator, LysR family 0.53 OH686_21015 fumarate hydratase, class II low > 80
Serratia liquefaciens MT49 0.40 IAI46_07890 LysR family transcriptional regulator 0.74 IAI46_11655 class II fumarate hydratase low > 86
Variovorax sp. OAS795 0.40 ABID97_RS27255 LysR substrate-binding domain-containing protein 0.74 ABID97_RS17545 class II fumarate hydratase low > 91
Rahnella sp. WP5 0.39 EX31_RS18710 LysR family transcriptional regulator 0.73 EX31_RS06965 class II fumarate hydratase low > 89
Pseudomonas simiae WCS417 0.39 PS417_18700 LysR family transcriptional regulator 0.54 PS417_19200 fumarate hydratase low > 88
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_2395 transcriptional regulator, LysR family 0.56 Psyr_3661 Fumarate hydratase, class II low > 86
Escherichia coli ECRC62 0.39 BNILDI_17235 yneJ Uncharacterized HTH-type transcriptional regulator YneJ 0.73 BNILDI_16945 fumC class II fumarate hydratase low > 75
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_2395 transcriptional regulator, LysR family 0.56 Psyr_3661 Fumarate hydratase, class II low > 86
Escherichia coli Nissle 1917 0.39 ECOLIN_RS08715 LysR family transcriptional regulator 0.73 ECOLIN_RS08995 class II fumarate hydratase
Escherichia fergusonii Becca 0.39 EFB2_02434 HTH-type transcriptional regulator GltR 0.73 EFB2_02381 Fumarate hydratase class II low > 86
Escherichia coli ECOR27 0.38 NOLOHH_18755 yneJ Uncharacterized HTH-type transcriptional regulator YneJ 0.73 NOLOHH_18155 fumC class II fumarate hydratase low > 75
Rhodospirillum rubrum S1H 0.38 Rru_A1652 Transcriptional Regulator, LysR family (NCBI) 0.53 Rru_A2129 Fumarate hydratase, class II (NCBI) low > 58
Escherichia coli ECRC102 0.38 NIAGMN_25250 yneJ Uncharacterized HTH-type transcriptional regulator YneJ 0.73 NIAGMN_00425 fumC class II fumarate hydratase
Escherichia coli ECRC101 0.38 MCAODC_16820 yneJ Uncharacterized HTH-type transcriptional regulator YneJ 0.73 MCAODC_17760 fumC class II fumarate hydratase low > 87
Escherichia coli ECRC100 0.38 OKFHMN_01105 yneJ Uncharacterized HTH-type transcriptional regulator YneJ 0.73 OKFHMN_27650 fumC class II fumarate hydratase
Escherichia coli ECRC99 0.38 KEDOAH_27325 yneJ Uncharacterized HTH-type transcriptional regulator YneJ 0.73 KEDOAH_00455 fumC class II fumarate hydratase
Pseudomonas putida KT2440 0.38 PP_3152 putative DNA-binding transcriptional regulator, LysR-type 0.54 PP_1755 fumarate hydratase (class 2) low > 96
Escherichia coli ECRC98 0.38 JDDGAC_03615 yneJ Uncharacterized HTH-type transcriptional regulator YneJ 0.73 JDDGAC_02240 fumC class II fumarate hydratase
Escherichia coli BW25113 0.38 b1526 yneJ predicted DNA-binding transcriptional regulator (NCBI) 0.73 b1611 fumC fumarate hydratase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.38 OHPLBJKB_02193 HTH-type transcriptional regulator GltR 0.75 OHPLBJKB_02115 Fumarate hydratase class II low > 73
Escherichia coli BL21 0.38 ECD_01483 putative DNA-binding transcriptional regulator 0.73 ECD_01580 fumarate hydratase (fumarase C),aerobic Class II
Pseudomonas fluorescens SBW25 0.38 PFLU_RS20670 LysR family transcriptional regulator 0.53 PFLU_RS21170 class II fumarate hydratase low > 109
Pseudomonas fluorescens FW300-N2E2 0.38 Pf6N2E2_2660 Transcriptional regulators, LysR family 0.53 Pf6N2E2_2536 Fumarate hydratase class II (EC 4.2.1.2) low > 103
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS20670 LysR family transcriptional regulator 0.53 PFLU_RS21170 class II fumarate hydratase low > 109
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_04115 LysR family transcriptional regulator 0.53 AO356_03545 fumarate hydratase
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_18385 LysR family transcriptional regulator 0.54 AO353_02150 fumarate hydratase low > 101
Pseudomonas fluorescens FW300-N1B4 0.37 Pf1N1B4_532 Transcriptional regulators, LysR family 0.54 Pf1N1B4_367 Fumarate hydratase class II (EC 4.2.1.2) low > 87
Pseudomonas sp. RS175 0.37 PFR28_00773 HTH-type transcriptional regulator GltR 0.53 PFR28_00889 Fumarate hydratase class II low > 88
Enterobacter sp. TBS_079 0.37 MPMX20_02268 HTH-type transcriptional regulator GltR 0.75 MPMX20_02022 Fumarate hydratase class II low > 85
Dickeya dianthicola 67-19 0.37 HGI48_RS09355 LysR family transcriptional regulator 0.75 HGI48_RS10655 class II fumarate hydratase low > 71
Dickeya dianthicola ME23 0.37 DZA65_RS09660 LysR family transcriptional regulator 0.75 DZA65_RS11125 class II fumarate hydratase low > 75
Enterobacter asburiae PDN3 0.37 EX28DRAFT_1199 Transcriptional regulator 0.75 EX28DRAFT_1608 fumarase, class II (EC 4.2.1.2) low > 76
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_3879 LysR family transcriptional regulator YneJ 0.53 PfGW456L13_2160 Fumarate hydratase class II (EC 4.2.1.2) low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.37 GFF2510 LysR family transcriptional regulator YneJ 0.74 GFF1806 Fumarate hydratase class II (EC 4.2.1.2) low > 78
Dickeya dadantii 3937 0.36 DDA3937_RS09330 LysR family transcriptional regulator 0.76 DDA3937_RS10655 class II fumarate hydratase low > 74
Klebsiella michiganensis M5al 0.36 BWI76_RS15210 LysR family transcriptional regulator 0.75 BWI76_RS16270 fumarate hydratase, class II low > 92
Variovorax sp. SCN45 0.34 GFF1658 Transcriptional regulator, LysR family 0.74 GFF479 Fumarate hydratase class II (EC 4.2.1.2) low > 127
Azospirillum sp. SherDot2 0.28 MPMX19_02320 HTH-type transcriptional regulator GltR 0.64 MPMX19_01424 Fumarate hydratase class II low > 112
Magnetospirillum magneticum AMB-1 0.27 AMB_RS11465 transcriptional regulator 0.65 AMB_RS18480 class II fumarate hydratase
Pedobacter sp. GW460-11-11-14-LB5 0.26 CA265_RS04875 LysR family transcriptional regulator 0.58 CA265_RS23855 fumarate hydratase, class II

Not shown: 0 genomes with orthologs for BPHYT_RS13975 only; 43 genomes with orthologs for BPHYT_RS14615 only