Conservation of cofitness between BPHYT_RS15595 and BPHYT_RS08950 in Burkholderia phytofirmans PsJN

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS15595 ABC transporter 1.0 BPHYT_RS08950 aminotransferase 0.25 19
Paraburkholderia sabiae LMG 24235 0.93 QEN71_RS03115 ABC transporter ATP-binding protein 0.91 QEN71_RS22410 pyridoxal phosphate-dependent aminotransferase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.93 H281DRAFT_04060 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family 0.94 H281DRAFT_00809 alanine-synthesizing transaminase low > 103
Paraburkholderia graminis OAS925 0.91 ABIE53_003283 branched-chain amino acid transport system ATP-binding protein 0.94 ABIE53_002025 alanine-synthesizing transaminase low > 113
Ralstonia solanacearum PSI07 0.81 RPSI07_RS12705 ABC transporter ATP-binding protein 0.77 RPSI07_RS17495 pyridoxal phosphate-dependent aminotransferase low > 81
Ralstonia solanacearum IBSBF1503 0.81 RALBFv3_RS04680 ABC transporter ATP-binding protein 0.78 RALBFv3_RS15870 pyridoxal phosphate-dependent aminotransferase low > 76
Ralstonia solanacearum UW163 0.81 UW163_RS08990 ABC transporter ATP-binding protein 0.78 UW163_RS13315 pyridoxal phosphate-dependent aminotransferase
Cupriavidus basilensis FW507-4G11 0.81 RR42_RS16965 ABC transporter 0.77 RR42_RS12545 aminotransferase low > 128
Ralstonia sp. UNC404CL21Col 0.81 ABZR87_RS00300 ABC transporter ATP-binding protein 0.77 ABZR87_RS11440 pyridoxal phosphate-dependent aminotransferase low > 80
Ralstonia solanacearum GMI1000 0.80 RS_RS12240 ABC transporter ATP-binding protein 0.78 RS_RS06650 pyridoxal phosphate-dependent aminotransferase low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.76 GFF780 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) 0.75 GFF3934 Aspartate aminotransferase (EC 2.6.1.1) low > 90
Acidovorax sp. GW101-3H11 0.73 Ac3H11_1693 ABC transporter for glutamine/isoleucine/leucine/phenylalanine/proline/serine/tyrosine, ATPase component 1 (from data) 0.76 Ac3H11_1508 Aspartate aminotransferase (EC 2.6.1.1) low > 79
Variovorax sp. SCN45 0.72 GFF6031 Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1) 0.75 GFF2803 Alanine transaminase (EC 2.6.1.2) low > 127
Variovorax sp. OAS795 0.72 ABID97_RS07850 ABC transporter ATP-binding protein 0.75 ABID97_RS10885 pyridoxal phosphate-dependent aminotransferase low > 91
Serratia liquefaciens MT49 0.64 IAI46_13095 ABC transporter ATP-binding protein 0.66 IAI46_17720 pyridoxal phosphate-dependent aminotransferase low > 86
Klebsiella michiganensis M5al 0.63 BWI76_RS07270 ABC transporter ATP-binding protein 0.67 BWI76_RS20205 aminotransferase AlaT low > 92
Enterobacter asburiae PDN3 0.63 EX28DRAFT_1076 ABC-type branched-chain amino acid transport systems, ATPase component 0.67 EX28DRAFT_0319 Aspartate/tyrosine/aromatic aminotransferase low > 76
Dechlorosoma suillum PS 0.61 Dsui_0627 ABC-type branched-chain amino acid transport systems, ATPase component 0.76 Dsui_2908 aspartate/tyrosine/aromatic aminotransferase low > 51
Dickeya dadantii 3937 0.48 DDA3937_RS18210 ABC transporter ATP-binding protein 0.66 DDA3937_RS14345 pyridoxal phosphate-dependent aminotransferase low > 74
Marinobacter adhaerens HP15 0.48 HP15_2704 branched-chain amino acid ABC transporter, ATP-binding protein 0.63 HP15_2095 aspartate aminotransferase low > 73
Pseudomonas putida KT2440 0.46 PP_1138 branched chain amino acid transporter - ATP binding subunit 0.67 PP_1872 glutamate-pyruvate aminotransferase low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_3848 L-valine ABC transporter ATP-binding protein / L-isoleucine ABC transporter ATP-binding protein / L-leucine ABC transporter ATP-binding protein 0.67 Psyr_3615 Aminotransferase, class I and II low > 86
Rahnella sp. WP5 0.45 EX31_RS14790 ABC transporter ATP-binding protein 0.62 EX31_RS19445 pyridoxal phosphate-dependent aminotransferase low > 89
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_3848 L-valine ABC transporter ATP-binding protein / L-isoleucine ABC transporter ATP-binding protein / L-leucine ABC transporter ATP-binding protein 0.67 Psyr_3615 Aminotransferase, class I and II low > 86
Pantoea sp. MT58 0.45 IAI47_01580 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.66 IAI47_06350 pyridoxal phosphate-dependent aminotransferase low > 76
Pectobacterium carotovorum WPP14 0.45 HER17_RS00510 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.65 HER17_RS07115 pyridoxal phosphate-dependent aminotransferase low > 75
Pseudomonas simiae WCS417 0.45 PS417_06600 leucine/isoleucine/valine transporter ATP-binding subunit 0.67 PS417_08560 aminotransferase low > 88
Enterobacter sp. TBS_079 0.45 MPMX20_04331 Lipopolysaccharide export system ATP-binding protein LptB 0.67 MPMX20_03220 Glutamate-pyruvate aminotransferase AlaA low > 85
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS06630 ABC transporter ATP-binding protein 0.67 PFLU_RS08510 pyridoxal phosphate-dependent aminotransferase low > 109
Dickeya dianthicola 67-19 0.45 HGI48_RS20715 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.66 HGI48_RS14320 pyridoxal phosphate-dependent aminotransferase low > 71
Pseudomonas fluorescens SBW25 0.45 PFLU_RS06630 ABC transporter ATP-binding protein 0.67 PFLU_RS08510 pyridoxal phosphate-dependent aminotransferase low > 109
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF551 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) 0.67 GFF1894 Aspartate aminotransferase (EC 2.6.1.1) low > 78
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_05335 ABC transporter ATP-binding protein 0.67 AO356_03090 aminotransferase low > 104
Escherichia coli ECOR27 0.44 NOLOHH_08550 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.67 NOLOHH_14445 alaA alanine transaminase AlaA low > 75
Escherichia coli Nissle 1917 0.44 ECOLIN_RS19760 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.67 ECOLIN_RS13295 alanine transaminase AlaA low > 55
Escherichia coli BL21 0.44 ECD_03304 branched-chain amino acid ABC transporter ATPase 0.67 ECD_02215 glutamate-pyruvate aminotransferase; glutamic-pyruvic transaminase (GPT); alanine transaminase low > 61
Escherichia coli ECRC99 0.44 KEDOAH_11385 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.67 KEDOAH_05370 alaA alanine transaminase AlaA
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_00248 Lipopolysaccharide export system ATP-binding protein LptB 0.67 OHPLBJKB_01415 Glutamate-pyruvate aminotransferase AlaA low > 73
Escherichia coli ECRC102 0.44 NIAGMN_14525 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.67 NIAGMN_20595 alaA alanine transaminase AlaA
Escherichia coli ECRC98 0.44 JDDGAC_20385 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.67 JDDGAC_26790 alaA alanine transaminase AlaA low > 86
Escherichia coli BW25113 0.44 b3455 livG leucine/isoleucine/valine transporter subunit (NCBI) 0.67 b2290 yfbQ aspartate aminotransferase (NCBI) 0.13 75
Escherichia coli ECRC62 0.44 BNILDI_02955 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.67 BNILDI_13365 alaA alanine transaminase AlaA low > 75
Escherichia fergusonii Becca 0.44 EFB2_00367 Lipopolysaccharide export system ATP-binding protein LptB 0.67 EFB2_01568 Glutamate-pyruvate aminotransferase AlaA low > 86
Escherichia coli ECRC101 0.44 MCAODC_07285 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.67 MCAODC_13865 alaA alanine transaminase AlaA low > 87
Escherichia coli ECOR38 0.44 HEPCGN_15575 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.67 HEPCGN_22030 alaA alanine transaminase AlaA low > 87
Escherichia coli ECRC100 0.44 OKFHMN_16755 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.67 OKFHMN_22825 alaA alanine transaminase AlaA low > 80
Pseudomonas fluorescens GW456-L13 0.44 PfGW456L13_4610 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) 0.67 PfGW456L13_2252 Aspartate aminotransferase (EC 2.6.1.1) low > 87
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_2925 ABC transporter for L-leucine/L-isoleucine/L-phenylalanine/D-alanine, ATPase component 1 LivG (from data) 0.67 Pf6N2E2_2446 Aspartate aminotransferase (EC 2.6.1.1) low > 103
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_17110 ABC transporter ATP-binding protein 0.67 AO353_19150 aminotransferase low > 101
Pseudomonas stutzeri RCH2 0.44 Psest_1309 ABC-type branched-chain amino acid transport systems, ATPase component 0.67 Psest_1772 Aspartate/tyrosine/aromatic aminotransferase low > 67
Pseudomonas fluorescens FW300-N1B4 0.44 Pf1N1B4_3215 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) 0.67 Pf1N1B4_261 Aspartate aminotransferase (EC 2.6.1.1)
Pseudomonas sp. RS175 0.44 PFR28_00537 Lipopolysaccharide export system ATP-binding protein LptB 0.67 PFR28_00984 Glutamate-pyruvate aminotransferase AlaA low > 88
Erwinia tracheiphila SCR3 0.44 LU632_RS19240 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.65 LU632_RS07955 pyridoxal phosphate-dependent aminotransferase low > 74
Pseudomonas sp. S08-1 0.42 OH686_04620 Branched-chain amino acid ABC transporter, ATP-binding protein LivG 0.66 OH686_22575 Alanine transaminase low > 80
Shewanella loihica PV-4 0.39 Shew_2611 ABC transporter-related protein (RefSeq) 0.65 Shew_1914 aminotransferase AlaT (RefSeq) low > 60

Not shown: 15 genomes with orthologs for BPHYT_RS15595 only; 18 genomes with orthologs for BPHYT_RS08950 only