Conservation of cofitness between BPHYT_RS01650 and BPHYT_RS01450 in Burkholderia phytofirmans PsJN

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS01650 23S rRNA methyltransferase 1.0 BPHYT_RS01450 DNA-binding protein 0.36 4
Paraburkholderia bryophila 376MFSha3.1 0.94 H281DRAFT_02203 SAM-dependent methyltransferase /23S rRNA m(5)C-1962 methyltransferase 0.68 H281DRAFT_02242 DNA protecting protein DprA low > 103
Paraburkholderia graminis OAS925 0.94 ABIE53_000425 23S rRNA (cytosine1962-C5)-methyltransferase 0.71 ABIE53_000387 DNA processing protein 0.31 4
Paraburkholderia sabiae LMG 24235 0.92 QEN71_RS00350 class I SAM-dependent rRNA methyltransferase 0.62 QEN71_RS00150 DNA-processing protein DprA low > 153
Ralstonia sp. UNC404CL21Col 0.76 ABZR87_RS05070 class I SAM-dependent rRNA methyltransferase 0.42 ABZR87_RS04985 DNA-processing protein DprA low > 80
Ralstonia solanacearum PSI07 0.76 RPSI07_RS23695 class I SAM-dependent rRNA methyltransferase 0.39 RPSI07_RS23610 DNA-protecting protein DprA low > 81
Ralstonia solanacearum IBSBF1503 0.76 RALBFv3_RS09670 class I SAM-dependent rRNA methyltransferase 0.39 RALBFv3_RS09755 DNA-protecting protein DprA low > 76
Ralstonia solanacearum UW163 0.76 UW163_RS03910 class I SAM-dependent rRNA methyltransferase 0.39 UW163_RS03825 DNA-protecting protein DprA — —
Ralstonia solanacearum GMI1000 0.75 RS_RS00255 class I SAM-dependent rRNA methyltransferase 0.40 RS_RS00340 DNA-protecting protein DprA low > 80
Dechlorosoma suillum PS 0.56 Dsui_0653 putative SAM-dependent methyltransferase 0.41 Dsui_0819 DNA protecting protein DprA low > 51
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_06820 ribosomal RNA large subunit methyltransferase I 0.27 CSW01_00245 DNA-protecting protein DprA low > 62
Variovorax sp. SCN45 0.47 GFF4489 23S rRNA (cytosine(1962)-C(5))-methyltransferase (EC 2.1.1.191) 0.35 GFF5489 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake low > 127
Alteromonas macleodii MIT1002 0.47 MIT1002_01688 Ribosomal RNA large subunit methyltransferase I 0.24 MIT1002_00022 DNA protecting protein DprA low > 70
Klebsiella michiganensis M5al 0.47 BWI76_RS10045 23S rRNA (cytosine(1962)-C(5))-methyltransferase 0.26 BWI76_RS25665 DNA-processing protein DprA low > 92
Escherichia coli ECRC62 0.46 BNILDI_19905 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.26 BNILDI_02185 dprA DNA-protecting protein DprA low > 75
Escherichia coli ECRC99 0.46 KEDOAH_22550 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.26 KEDOAH_10605 dprA DNA-protecting protein DprA — —
Escherichia coli ECRC102 0.46 NIAGMN_02905 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.26 NIAGMN_15305 dprA DNA-protecting protein DprA — —
Escherichia coli ECRC98 0.46 JDDGAC_08795 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.26 JDDGAC_21165 dprA DNA-protecting protein DprA low > 86
Escherichia coli ECRC101 0.46 MCAODC_24575 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.26 MCAODC_08065 dprA DNA-protecting protein DprA low > 87
Escherichia coli BL21 0.46 ECD_00971 23S rRNA m(5)C1962 methyltransferase, SAM-dependent 0.26 ECD_03136 DNA recombination-mediator A family protein low > 61
Enterobacter sp. TBS_079 0.46 MPMX20_01617 Ribosomal RNA large subunit methyltransferase I 0.25 MPMX20_04193 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.46 EX28DRAFT_1976 Predicted SAM-dependent methyltransferases 0.26 EX28DRAFT_0042 DNA protecting protein DprA low > 76
Escherichia coli BW25113 0.46 b0967 yccW predicted methyltransferase (RefSeq) 0.26 b4473 smf hypothetical protein (NCBI) low > 76
Escherichia coli ECOR27 0.46 NOLOHH_21740 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.26 NOLOHH_09335 dprA DNA-protecting protein DprA low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_02699 Ribosomal RNA large subunit methyltransferase I 0.26 OHPLBJKB_00418 hypothetical protein low > 73
Escherichia coli Nissle 1917 0.46 ECOLIN_RS05085 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.26 ECOLIN_RS18860 DNA-protecting protein DprA — —
Escherichia fergusonii Becca 0.46 EFB2_03104 Ribosomal RNA large subunit methyltransferase I 0.26 EFB2_00538 hypothetical protein low > 86
Escherichia coli ECOR38 0.46 HEPCGN_23335 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.26 HEPCGN_16365 dprA DNA-protecting protein DprA low > 87
Erwinia tracheiphila SCR3 0.46 LU632_RS10090 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.26 LU632_RS22465 dprA DNA-protecting protein DprA 0.52 12
Pantoea sp. MT58 0.46 IAI47_12595 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.25 IAI47_02295 DNA-protecting protein DprA low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF3258 LSU m5C1962 methyltransferase RlmI 0.26 GFF2393 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake low > 78
Variovorax sp. OAS795 0.45 ABID97_RS06155 class I SAM-dependent methyltransferase 0.38 ABID97_RS01830 DNA-processing protein DprA low > 91
Acidovorax sp. GW101-3H11 0.45 Ac3H11_2000 LSU m5C1962 methyltransferase RlmI 0.35 Ac3H11_4411 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake low > 79
Pedobacter sp. GW460-11-11-14-LB5 0.44 CA265_RS19815 RlmI/RlmK family 23S rRNA methyltransferase 0.21 CA265_RS04370 DNA protecting protein DprA low > 88
Rahnella sp. WP5 0.44 EX31_RS17990 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.25 EX31_RS15970 DNA-protecting protein DprA low > 89
Serratia liquefaciens MT49 0.44 IAI46_08925 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.23 IAI46_23260 DNA-protecting protein DprA low > 86
Mucilaginibacter yixingensis YX-36 DSM 26809 0.42 ABZR88_RS22040 class I SAM-dependent rRNA methyltransferase 0.20 ABZR88_RS13955 DNA-processing protein DprA low > 71
Phocaeicola dorei CL03T12C01 0.34 ABI39_RS18215 class I SAM-dependent rRNA methyltransferase 0.19 ABI39_RS05220 DNA-processing protein DprA low > 72
Phocaeicola vulgatus CL09T03C04 0.32 HMPREF1058_RS05890 class I SAM-dependent rRNA methyltransferase 0.19 HMPREF1058_RS11685 DNA-protecting protein DprA low > 67
Echinicola vietnamensis KMM 6221, DSM 17526 0.31 Echvi_3350 Predicted SAM-dependent methyltransferases 0.20 Echvi_3854 DNA protecting protein DprA low > 79
Azospirillum brasilense Sp245 0.28 AZOBR_RS01190 SAM-dependent methyltransferase 0.27 AZOBR_RS15885 DNA processing protein DprA low > 97
Xanthomonas campestris pv. campestris strain 8004 0.27 Xcc-8004.5393.1 LSU m5C1962 methyltransferase RlmI 0.29 Xcc-8004.4746.1 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake low > 74
Azospirillum sp. SherDot2 0.26 MPMX19_00203 Ribosomal RNA large subunit methyltransferase I 0.25 MPMX19_01508 hypothetical protein low > 112
Dyella japonica UNC79MFTsu3.2 0.26 ABZR86_RS16890 class I SAM-dependent rRNA methyltransferase 0.30 ABZR86_RS13870 DNA-processing protein DprA low > 74
Magnetospirillum magneticum AMB-1 0.26 AMB_RS22065 class I SAM-dependent rRNA methyltransferase 0.22 AMB_RS03500 DNA-protecting protein DprA low > 64
Lysobacter sp. OAE881 0.26 ABIE51_RS00980 class I SAM-dependent rRNA methyltransferase 0.24 ABIE51_RS02235 DNA-processing protein DprA low > 62
Phaeobacter inhibens DSM 17395 0.25 PGA1_c19990 ribosomal RNA large subunit methyltransferase I 0.20 PGA1_c06230 putative protein Smf low > 62
Rhodanobacter denitrificans MT42 0.25 LRK55_RS06665 class I SAM-dependent rRNA methyltransferase 0.33 LRK55_RS09785 DNA-processing protein DprA 0.56 24
Rhodanobacter denitrificans FW104-10B01 0.25 LRK54_RS06920 class I SAM-dependent rRNA methyltransferase 0.33 LRK54_RS10145 DNA-processing protein DprA low > 59
Rhodanobacter sp. FW510-T8 0.23 OKGIIK_16710 rlmK RlmI/RlmK family 23S rRNA methyltransferase 0.31 OKGIIK_13770 dprA DNA-processing protein DprA low > 52

Not shown: 32 genomes with orthologs for BPHYT_RS01650 only; 15 genomes with orthologs for BPHYT_RS01450 only