| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli ECRC62 | 1.0 | BNILDI_14450 | mdtC | multidrug efflux RND transporter permease subunit MdtC | 1.0 | BNILDI_16670 | mdtK | multidrug efflux MATE transporter MdtK | 0.63 | 19 |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_15535 | mdtC | multidrug efflux RND transporter permease subunit MdtC | 1.00 | NOLOHH_17880 | mdtK | multidrug efflux MATE transporter MdtK | low | > 75 |
| Escherichia coli BL21 | 1.00 | ECD_01981 | | multidrug efflux system, subunit C | 1.00 | ECD_01634 | | multidrug efflux system transporter | low | > 61 |
| Escherichia coli ECRC100 | 1.00 | OKFHMN_24190 | mdtC | multidrug efflux RND transporter permease subunit MdtC | 1.00 | OKFHMN_27360 | mdtK | multidrug efflux MATE transporter MdtK | low | > 80 |
| Escherichia coli ECRC101 | 1.00 | MCAODC_20750 | mdtC | multidrug efflux RND transporter permease subunit MdtC | 1.00 | MCAODC_18050 | mdtK | multidrug efflux MATE transporter MdtK | low | > 87 |
| Escherichia coli ECRC99 | 1.00 | KEDOAH_03960 | mdtC | multidrug efflux RND transporter permease subunit MdtC | 1.00 | KEDOAH_00750 | mdtK | multidrug efflux MATE transporter MdtK | — | — |
| Escherichia coli ECRC98 | 1.00 | JDDGAC_28300 | mdtC | multidrug efflux RND transporter permease subunit MdtC | 1.00 | JDDGAC_01950 | mdtK | multidrug efflux MATE transporter MdtK | low | > 86 |
| Escherichia coli ECRC102 | 1.00 | NIAGMN_22135 | mdtC | multidrug efflux RND transporter permease subunit MdtC | 1.00 | NIAGMN_00705 | mdtK | multidrug efflux MATE transporter MdtK | — | — |
| Escherichia coli BW25113 | 1.00 | b2076 | mdtC | multidrug efflux system, subunit C (NCBI) | 1.00 | b1663 | mdtK | multidrug efflux protein NorM (NCBI) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_01628 | | Multidrug resistance protein MdtC | 0.99 | OHPLBJKB_02061 | | Multidrug resistance protein MdtK | low | > 73 |
| Escherichia coli ECOR38 | 0.99 | HEPCGN_02880 | mdtC | multidrug efflux RND transporter permease subunit MdtC | 1.00 | HEPCGN_05745 | mdtK | multidrug efflux MATE transporter MdtK | low | > 87 |
| Escherichia coli Nissle 1917 | 0.99 | ECOLIN_RS12205 | | multidrug efflux RND transporter permease subunit MdtC | 0.99 | ECOLIN_RS09270 | | multidrug efflux MATE transporter MdtK | — | — |
| Escherichia fergusonii Becca | 0.99 | EFB2_01779 | | Multidrug resistance protein MdtC | 1.00 | EFB2_02329 | | Multidrug resistance protein MdtK | low | > 86 |
| Enterobacter asburiae PDN3 | 0.92 | EX28DRAFT_0482 | | Cation/multidrug efflux pump | 0.89 | EX28DRAFT_1660 | | putative efflux protein, MATE family | low | > 76 |
| Enterobacter sp. TBS_079 | 0.91 | MPMX20_03062 | | Multidrug resistance protein MdtC | 0.91 | MPMX20_01973 | | Multidrug resistance protein MdtK | 0.21 | 43 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.90 | GFF3853 | | Multidrug transporter MdtC | 0.92 | GFF3613 | | Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps | low | > 78 |
| Klebsiella michiganensis M5al | 0.90 | BWI76_RS19260 | | multidrug transporter subunit MdtC | 0.89 | BWI76_RS16535 | | MATE family efflux transporter | low | > 92 |
| Serratia liquefaciens MT49 | 0.82 | IAI46_18980 | | multidrug efflux RND transporter permease subunit MdtC | 0.77 | IAI46_11210 | | MATE family efflux transporter | low | > 86 |
| Pectobacterium carotovorum WPP14 | 0.79 | HER17_RS06315 | | multidrug efflux RND transporter permease subunit MdtC | 0.73 | HER17_RS09220 | | MATE family efflux transporter | low | > 75 |
| Pantoea sp. MT58 | 0.79 | IAI47_06865 | | multidrug efflux RND transporter permease subunit MdtC | 0.76 | IAI47_10820 | | MATE family efflux transporter | low | > 76 |
| Dickeya dianthicola 67-19 | 0.78 | HGI48_RS15350 | | multidrug efflux RND transporter permease subunit MdtC | 0.73 | HGI48_RS12700 | | MATE family efflux transporter | low | > 71 |
| Dickeya dianthicola ME23 | 0.78 | DZA65_RS16170 | | multidrug efflux RND transporter permease subunit MdtC | 0.73 | DZA65_RS13155 | | MATE family efflux transporter | low | > 75 |
| Erwinia tracheiphila SCR3 | 0.73 | LU632_RS08685 | mdtC | multidrug efflux RND transporter permease subunit MdtC | 0.72 | LU632_RS11170 | | MATE family efflux transporter | low | > 74 |
| Ralstonia solanacearum PSI07 | 0.63 | RPSI07_RS05520 | | nodulation protein | 0.21 | RPSI07_RS18275 | | MATE family efflux transporter | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.63 | RS_RS22920 | | nodulation protein | 0.21 | RS_RS05915 | | MATE family efflux transporter | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.63 | RALBFv3_RS18115 | | nodulation protein | 0.22 | RALBFv3_RS15100 | | MATE family efflux transporter | low | > 76 |
| Ralstonia solanacearum UW163 | 0.63 | UW163_RS21015 | | nodulation protein | 0.22 | UW163_RS12570 | | MATE family efflux transporter | — | — |
| Ralstonia sp. UNC404CL21Col | 0.62 | ABZR87_RS19020 | | multidrug efflux RND transporter permease subunit | 0.23 | ABZR87_RS10730 | | MATE family efflux transporter | low | > 80 |
| Herbaspirillum seropedicae SmR1 | 0.62 | HSERO_RS07655 | | nodulation protein | 0.23 | HSERO_RS04300 | | multidrug transporter MatE | low | > 78 |
| Acidovorax sp. GW101-3H11 | 0.57 | Ac3H11_3620 | | Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA | 0.17 | Ac3H11_463 | | Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog | low | > 79 |
| Pseudomonas fluorescens FW300-N2E3 | 0.55 | AO353_22900 | | acriflavine resistance protein B | 0.41 | AO353_00550 | | MATE family efflux transporter | low | > 101 |
| Pseudomonas sp. S08-1 | 0.55 | OH686_00930 | | Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtC (RND type) | 0.43 | OH686_02075 | | Na(+)/drug antiporter, MATE family of MDR efflux pumps | low | > 80 |
| Pseudomonas fluorescens GW456-L13 | 0.54 | PfGW456L13_3265 | | Acriflavin resistance plasma membrane protein | 0.41 | PfGW456L13_4049 | | Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps | low | > 87 |
| Pseudomonas syringae pv. syringae B728a | 0.54 | Psyr_2484 | | Acriflavin resistance protein | 0.19 | Psyr_0073 | | Multi antimicrobial extrusion protein MatE | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.54 | Psyr_2484 | | Acriflavin resistance protein | 0.19 | Psyr_0073 | | Multi antimicrobial extrusion protein MatE | low | > 86 |
| Pseudomonas fluorescens SBW25-INTG | 0.53 | PFLU_RS13435 | | MMPL family transporter | 0.41 | PFLU_RS07610 | | MATE family efflux transporter | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.53 | PFLU_RS13435 | | MMPL family transporter | 0.41 | PFLU_RS07610 | | MATE family efflux transporter | low | > 109 |
| Pseudomonas stutzeri RCH2 | 0.53 | Psest_2140 | | Cation/multidrug efflux pump | 0.40 | Psest_2549 | | putative efflux protein, MATE family | low | > 67 |
| Rahnella sp. WP5 | 0.53 | EX31_RS13375 | | MMPL family transporter | 0.72 | EX31_RS13855 | | MATE family efflux transporter | 0.46 | 71 |
| Pseudomonas simiae WCS417 | 0.53 | PS417_12750 | | acriflavine resistance protein B | 0.41 | PS417_07530 | | multidrug transporter | low | > 88 |
| Pseudomonas putida KT2440 | 0.53 | PP_3583 | | multidrug efflux transport system - membrane subunit | 0.19 | PP_5262 | | Probable multidrug resistance protein NorM | low | > 96 |
| Pseudomonas fluorescens FW300-N2E2 | 0.52 | Pf6N2E2_1271 | | Acriflavin resistance plasma membrane protein | 0.41 | Pf6N2E2_2298 | | Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.52 | AO356_25880 | | acriflavine resistance protein B | 0.41 | AO356_02370 | | MATE family efflux transporter | low | > 104 |
| Pseudomonas sp. RS175 | 0.51 | PFR28_02193 | | Multidrug resistance protein MdtC | 0.41 | PFR28_01102 | | Multidrug resistance protein NorM | low | > 88 |
| Rhodopseudomonas palustris CGA009 | 0.49 | TX73_018025 | | multidrug efflux RND transporter permease subunit | 0.21 | TX73_004890 | | MATE family efflux transporter | low | > 86 |
| Paraburkholderia sabiae LMG 24235 | 0.47 | QEN71_RS29845 | | efflux RND transporter permease subunit | 0.21 | QEN71_RS04380 | | MATE family efflux transporter | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.44 | H281DRAFT_06491 | | multidrug efflux pump | 0.22 | H281DRAFT_00822 | | multidrug resistance protein, MATE family | low | > 103 |
| Azospirillum brasilense Sp245 | 0.44 | AZOBR_RS14670 | | multidrug transporter | 0.13 | AZOBR_RS15325 | | multidrug transporter | low | > 97 |
| Burkholderia phytofirmans PsJN | 0.43 | BPHYT_RS07780 | | nodulation protein | 0.22 | BPHYT_RS09015 | | multidrug transporter MatE | low | > 109 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.43 | DVU0438 | | AcrB/AcrD/AcrF family protein (TIGR) | 0.10 | DVU1217 | | MATE efflux family protein (TIGR) | low | > 55 |
| Bosea sp. OAE506 | 0.41 | ABIE41_RS20140 | | efflux RND transporter permease subunit | 0.19 | ABIE41_RS08515 | | MATE family efflux transporter | low | > 77 |
| Agrobacterium fabrum C58 | 0.39 | Atu3274 | | AcrB/AcrD/AcrF family protein | 0.20 | Atu2172 | | multidrug efflux protein | low | > 89 |
| Variovorax sp. OAS795 | 0.39 | ABID97_RS06490 | | efflux RND transporter permease subunit | 0.22 | ABID97_RS14630 | | MATE family efflux transporter | low | > 91 |
| Rhizobium sp. OAE497 | 0.39 | ABIE40_RS05760 | | efflux RND transporter permease subunit | 0.20 | ABIE40_RS12780 | | MATE family efflux transporter | low | > 107 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.24 | CA264_13040 | | acriflavin resistance protein | 0.24 | CA264_06370 | | MATE family efflux transporter | low | > 74 |
| Acinetobacter radioresistens SK82 | 0.24 | MPMX26_02516 | | Multidrug resistance protein MdtC | 0.30 | MPMX26_00306 | | Multidrug resistance protein NorM | low | > 36 |
| Sinorhizobium meliloti 1021 | 0.23 | SMc01457 | | transport transmembrane protein | 0.21 | SMc01211 | | hypothetical protein | low | > 103 |
| Caulobacter crescentus NA1000 Δfur | 0.20 | CCNA_03301 | | cation/multidrug efflux pump AcrB | 0.10 | CCNA_02099 | | Na+ driven multidrug efflux pump | low | > 67 |
| Caulobacter crescentus NA1000 | 0.20 | CCNA_03301 | | cation/multidrug efflux pump AcrB | 0.10 | CCNA_02099 | | Na+ driven multidrug efflux pump | low | > 66 |
Not shown: 5 genomes with orthologs for BNILDI_14450 only; 34 genomes with orthologs for BNILDI_16670 only