Conservation of cofitness between Atu3804 and Atu1768 in Agrobacterium fabrum C58

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu3804 permease 1.0 Atu1768 hypothetical protein 0.24 8
Sinorhizobium meliloti 1021 0.37 SM_b20625 hypothetical protein 0.52 SMc00946 hypothetical protein low > 103
Pantoea sp. MT58 0.33 IAI47_17680 MFS transporter 0.19 IAI47_02565 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 76
Enterobacter sp. TBS_079 0.33 MPMX20_02689 Purine ribonucleoside efflux pump NepI 0.20 MPMX20_00448 Bifunctional NAD(P)H-hydrate repair enzyme Nnr low > 85
Enterobacter asburiae PDN3 0.32 EX28DRAFT_0776 Arabinose efflux permease 0.21 EX28DRAFT_3364 yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region low > 76
Lysobacter sp. OAE881 0.31 ABIE51_RS11010 MFS transporter 0.18 ABIE51_RS08050 NAD(P)H-hydrate dehydratase low > 62
Escherichia coli ECRC101 0.31 OKFHMN_15230 nepI purine ribonucleoside efflux pump NepI 0.19 OKFHMN_12280 nnr bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase — —
Escherichia coli ECRC62 0.31 BNILDI_04155 nepI purine ribonucleoside efflux pump NepI 0.19 BNILDI_06945 nnr bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase — —
Escherichia coli BL21 0.31 ECD_03546 putative transporter 0.19 ECD_04034 bifunctional NAD(P)H-hydrate repair enzyme; C-terminal domain ADP-dependent (S)-NAD(P)H-hydrate dehydratase and N-terminal domain NAD(P)H-hydrate epimerase low > 60
Escherichia fergusonii Becca 0.31 EFB2_00038 Purine ribonucleoside efflux pump NepI 0.20 EFB2_04368 Bifunctional NAD(P)H-hydrate repair enzyme Nnr low > 86
Escherichia coli ECRC101 0.31 MCAODC_05740 nepI purine ribonucleoside efflux pump NepI 0.19 MCAODC_02795 nnr bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase — —
Escherichia coli ECRC102 0.31 NIAGMN_12990 nepI purine ribonucleoside efflux pump NepI 0.19 NIAGMN_10130 nnr bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase — —
Escherichia coli ECOR27 0.31 NOLOHH_07370 nepI purine ribonucleoside efflux pump NepI 0.19 NOLOHH_04545 nnr bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 57
Escherichia coli ECRC98 0.31 JDDGAC_18855 nepI purine ribonucleoside efflux pump NepI 0.19 JDDGAC_15920 nnr bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase — —
Escherichia coli ECRC99 0.31 KEDOAH_12915 nepI purine ribonucleoside efflux pump NepI 0.19 KEDOAH_15875 nnr bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase — —
Escherichia coli ECOR38 0.31 HEPCGN_13950 nepI purine ribonucleoside efflux pump NepI 0.20 HEPCGN_10510 nnr bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_00038 Purine ribonucleoside efflux pump NepI 0.19 OHPLBJKB_03875 Bifunctional NAD(P)H-hydrate repair enzyme Nnr low > 73
Ralstonia sp. UNC404CL21Col 0.31 ABZR87_RS12380 MFS transporter 0.19 ABZR87_RS12740 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 80
Pectobacterium carotovorum WPP14 0.31 HER17_RS16845 MFS transporter 0.18 HER17_RS02560 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 75
Escherichia coli Nissle 1917 0.31 ECOLIN_RS21125 purine ribonucleoside efflux pump NepI 0.19 ECOLIN_RS24205 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 52
Escherichia coli BW25113 0.30 b3662 nepI predicted transporter (RefSeq) 0.19 b4167 yjeF predicted carbohydrate kinase (NCBI) low > 76
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS17780 MFS transporter 0.19 ABZR86_RS00840 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 74
Klebsiella michiganensis M5al 0.30 BWI76_RS27765 MFS transporter 0.20 BWI76_RS02510 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.30 GFF318 Putative transport protein 0.19 GFF820 NAD(P)HX epimerase / NAD(P)HX dehydratase low > 78
Methanococcus maripaludis S2 0.29 MMP_RS04150 MFS transporter 0.10 MMP_RS01375 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 25
Azospirillum sp. SherDot2 0.29 MPMX19_05305 Purine ribonucleoside efflux pump NepI 0.36 MPMX19_01552 Bifunctional NAD(P)H-hydrate repair enzyme Nnr low > 112
Pseudomonas syringae pv. syringae B728a ΔmexB 0.28 Psyr_3800 Major facilitator superfamily 0.18 Psyr_0567 Protein of unknown function UPF0031:YjeF-related protein, N-terminal low > 86
Pseudomonas syringae pv. syringae B728a 0.28 Psyr_3800 Major facilitator superfamily 0.18 Psyr_0567 Protein of unknown function UPF0031:YjeF-related protein, N-terminal 0.29 53
Ralstonia solanacearum PSI07 0.28 RPSI07_RS04185 MFS transporter 0.19 RPSI07_RS16180 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 81
Herbaspirillum seropedicae SmR1 0.27 HSERO_RS05365 transporter 0.16 HSERO_RS11180 sugar kinase low > 78
Paraburkholderia bryophila 376MFSha3.1 0.27 H281DRAFT_01232 Predicted arabinose efflux permease, MFS family 0.16 H281DRAFT_00907 yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region low > 103
Variovorax sp. OAS795 0.27 ABID97_RS08210 MFS transporter 0.14 ABID97_RS17190 NAD(P)H-hydrate dehydratase low > 91
Paraburkholderia graminis OAS925 0.27 ABIE53_005584 putative MFS family arabinose efflux permease 0.17 ABIE53_002139 hydroxyethylthiazole kinase-like uncharacterized protein yjeF low > 113
Rahnella sp. WP5 0.27 EX31_RS02405 MFS transporter 0.21 EX31_RS08845 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 89
Burkholderia phytofirmans PsJN 0.27 BPHYT_RS28285 MFS transporter 0.18 BPHYT_RS09505 carbohydrate kinase low > 109
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_29615 transporter 0.23 AO356_08680 carbohydrate kinase low > 104
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_2246 Arabinose efflux permease 0.22 Pf6N2E2_3619 NAD(P)HX epimerase / NAD(P)HX dehydratase low > 103
Cupriavidus basilensis FW507-4G11 0.26 RR42_RS30495 transcriptional regulator 0.16 RR42_RS09070 carbohydrate kinase low > 128
Pseudomonas sp. RS175 0.26 PFR28_01200 Purine ribonucleoside efflux pump NepI 0.23 PFR28_05116 Bifunctional NAD(P)H-hydrate repair enzyme Nnr low > 88
Variovorax sp. SCN45 0.26 GFF3833 FIG01056426: hypothetical protein 0.15 GFF397 NAD(P)H-hydrate epimerase (EC 5.1.99.6) / ADP-dependent (S)-NAD(P)H-hydrate dehydratase (EC 4.2.1.136) low > 127
Ralstonia solanacearum IBSBF1503 0.26 RALBFv3_RS20735 MFS transporter 0.20 RALBFv3_RS01295 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 76
Ralstonia solanacearum GMI1000 0.26 RS_RS01025 MFS transporter 0.20 RS_RS08700 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 80
Dickeya dianthicola 67-19 0.26 HGI48_RS08210 MFS transporter 0.20 HGI48_RS18570 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 71
Pseudomonas fluorescens FW300-N1B4 0.25 Pf1N1B4_4993 Arabinose efflux permease 0.21 Pf1N1B4_1417 NAD(P)HX epimerase / NAD(P)HX dehydratase low > 87
Paraburkholderia sabiae LMG 24235 0.25 QEN71_RS13705 MFS transporter 0.17 QEN71_RS21930 NAD(P)H-hydrate dehydratase low > 153
Serratia liquefaciens MT49 0.24 IAI46_07000 MFS transporter 0.21 IAI46_01600 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 86
Xanthomonas campestris pv. campestris strain 8004 0.21 Xcc-8004.371.1 transcriptional regulator 0.19 Xcc-8004.2253.1 NAD(P)HX epimerase / NAD(P)HX dehydratase low > 74
Azospirillum brasilense Sp245 0.12 AZOBR_RS21030 MFS transporter 0.33 AZOBR_RS07115 hypothetical protein low > 97

Not shown: 4 genomes with orthologs for Atu3804 only; 45 genomes with orthologs for Atu1768 only